[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: wigley & d)

EMDB-18471:
SWR1-nucleosome complex in configuration 1
Method: single particle / : Jalal ASB, Wigley DB

EMDB-18472:
SWR1-nucleosome complex in configuration 2
Method: single particle / : Jalal ASB, Wigley DB

PDB-8qku:
SWR1-nucleosome complex in configuration 1
Method: single particle / : Jalal ASB, Wigley DB

PDB-8qkv:
SWR1-nucleosome complex in configuration 2
Method: single particle / : Jalal ASB, Wigley DB

EMDB-18764:
SWR1-hexasome complex
Method: single particle / : Jalal ASB, Wigley DB

EMDB-18769:
SWR1-hexasome-dimer complex
Method: single particle / : Jalal ASB, Wigley DB

EMDB-50297:
SWR1 lacking Swc5 subunit in complex with hexasome
Method: single particle / : Jalal ASB, Wigley DB

PDB-8qyv:
SWR1-hexasome complex
Method: single particle / : Jalal ASB, Wigley DB

PDB-8qz0:
SWR1-hexasome-dimer complex
Method: single particle / : Jalal ASB, Wigley DB

PDB-9fbw:
SWR1 lacking Swc5 subunit in complex with hexasome
Method: single particle / : Jalal ASB, Wigley DB

EMDB-14737:
Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
Method: single particle / : Vance NR, Ayala R, Willhoft O, Tvardovskiy A, McCormack EA, Bartke T, Zhang X, Wigley DB

PDB-7zi4:
Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
Method: single particle / : Vance NR, Ayala R, Willhoft O, Tvardovskiy A, McCormack EA, Bartke T, Zhang X, Wigley DB

EMDB-15803:
RecBCD in complex with the phage protein gp5.9
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

EMDB-15804:
RecBCD-DNA in complex with the phage protein Abc2
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

EMDB-15805:
RecBCD-DNA in complex with the phage protein Abc2 and host PpiB
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

PDB-8b1r:
RecBCD in complex with the phage protein gp5.9
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

PDB-8b1t:
RecBCD-DNA in complex with the phage protein Abc2
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

PDB-8b1u:
RecBCD-DNA in complex with the phage protein Abc2 and host PpiB
Method: single particle / : Wilkinson M, Wilkinson OJ, Feyerherm C, Fletcher EE, Wigley DB, Dillingham MS

EMDB-10214:
Cryo-EM structure of the RecBCD Chi recognised complex
Method: single particle / : Cheng K, Wilkinson M

EMDB-10215:
Cryo-EM structure of the RecBCD Chi partially-recognised complex
Method: single particle / : Cheng K, Wilkinson M

EMDB-10216:
Cryo-EM structure of the RecBCD Chi unrecognised complex
Method: single particle / : Cheng K, Wilkinson M

EMDB-10217:
Cryo-EM structure of the RecBCD no Chi negative control complex
Method: single particle / : Cheng K, Wilkinson M

EMDB-10369:
Cryo-EM structure of the RecBCD in complex with Chi-minus2 substrate
Method: single particle / : Cheng K, Wilkinson M

EMDB-10370:
Cryo-EM structure of the RecBCD in complex with Chi-plus2 substrate
Method: single particle / : Cheng K, Wilkinson M

PDB-6sjb:
Cryo-EM structure of the RecBCD Chi recognised complex
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

PDB-6sje:
Cryo-EM structure of the RecBCD Chi partially-recognised complex
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

PDB-6sjf:
Cryo-EM structure of the RecBCD Chi unrecognised complex
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

PDB-6sjg:
Cryo-EM structure of the RecBCD no Chi negative control complex
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

PDB-6t2u:
Cryo-EM structure of the RecBCD in complex with Chi-minus2 substrate
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

PDB-6t2v:
Cryo-EM structure of the RecBCD in complex with Chi-plus2 substrate
Method: single particle / : Cheng K, Wilkinson M, Wigley DB

EMDB-4668:
Cas1-Cas2-Csn2-DNA complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G

EMDB-4670:
Cas1-Cas2-Csn2-DNA dimer complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G

EMDB-4671:
Segment of the Cas1-Cas2-Csn2-DNA filament complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G

PDB-6qxf:
Cas1-Cas2-Csn2-DNA complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G, Silanskas A, Gasiunas G, Siksnys V, Wigley DB

PDB-6qxt:
Cas1-Cas2-Csn2-DNA dimer complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G, Silanskas A, Gasiunas G, Siksnys V, Wigley DB

PDB-6qy3:
Segment of the Cas1-Cas2-Csn2-DNA filament complex from the Type II-A CRISPR-Cas system
Method: single particle / : Wilkinson M, Drabavicius G, Silanskas A, Gasiunas G, Siksnys V, Wigley DB

PDB-6hts:
Cryo-EM structure of the human INO80 complex bound to nucleosome
Method: single particle / : Ayala R, Willhoft O, Aramayo RJ, Wilkinson M, McCormack EA, Ocloo L, Wigley DB, Zhang X

EMDB-4395:
Chromatin remodeller-nucleosome complex at 3.6 A resolution.
Method: single particle / : Willhoft O, Chua EYD

EMDB-4396:
Chromatin remodeller-nucleosome complex at 4.5 A resolution.
Method: single particle / : Willhoft O, Chua EYD

PDB-6gej:
Chromatin remodeller-nucleosome complex at 3.6 A resolution.
Method: single particle / : Willhoft O, Chua EYD, Wilkinson M, Wigley DB

PDB-6gen:
Chromatin remodeller-nucleosome complex at 4.5 A resolution.
Method: single particle / : Willhoft O, Chua EYD, Wilkinson M, Wigley DB

EMDB-3954:
Cryo-EM structure of the human INO80 complex bound to nucleosome
Method: single particle / : Ayala R, Willhoft O, Aramayo RJ, Wilkinson M, McCormack EA, Ocloo L, Wigley DB, Zhang X

EMDB-3772:
hINO80 core complex
Method: single particle / : Aramayo RJ, Willhoft O, Ayala R, Bythell-Douglas R, Wigley D, Zhang X

EMDB-3773:
High resolution INO80 core complex
Method: single particle / : Aramayo RJ, Bythell-Douglas R, Ayala R, Willhoft O, Wigley D, Zhang X

EMDB-3774:
Cryo-EM structure of a human INO80 sub-complex (RuvBL1/2, Ino80)
Method: single particle / : Aramayo RJ, Willhoft O, Ayala R, Bythell-Douglas R, Wigley D, Zhang X

EMDB-3775:
Cryo-EM structure of a human INO80 sub-complex (RuvBL1/2, Ino80, Arp5, Ies6, Ies2)
Method: single particle / : Aramayo RJ, Willhoft O, Ayala R, Bythell-Douglas R, Wigley D, Zhang X

PDB-5oaf:
Human Rvb1/Rvb2 heterohexamer in INO80 complex
Method: single particle / : Aramayo RJ, Bythell-Douglas R, Ayala R, Willhoft O, Wigley D, Zhang X

EMDB-3607:
SWR1 chromatin remodelling complex
Method: single particle / : Chaban Y, Lin CL, Wigley DB

EMDB-3460:
Cryo-EM structure of Lambda Phage protein GamS bound to RecBCD
Method: single particle / : Wilkinson M, Chaban Y

PDB-5mbv:
Cryo-EM structure of Lambda Phage protein GamS bound to RecBCD.
Method: single particle / : Wilkinson M, Chaban Y, Wigley DB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more