[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 766 items for (author: steven & os)

EMDB-53716:
Hexahistidine-tagged tobacco mosaic virus coat protein 3-layer disk
Method: single particle / : Biela AP, Abu-Baker I

EMDB-53717:
Hexahistidine-tagged tobacco mosaic virus coat protein 4-layer disk
Method: single particle / : Biela AP, Abu-Baker I

EMDB-53718:
Hexahistidine-tagged tobacco mosaic virus coat protein 5-layer disk
Method: single particle / : Biela AP, Abu-Baker I

EMDB-53720:
Hexahistidine-tagged tobacco mosaic virus coat protein 6-layer disk
Method: single particle / : Biela AP, Abu-Baker I

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr1:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr2:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-52749:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 1)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52750:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 2)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52751:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 3)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52752:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 4)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52753:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 5)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52754:
Cryo-EM structure of Shigella flexneri LptDE in complex with a Bicyclic Peptide binder (Compound 12)
Method: single particle / : Allyjaun S, Dunbar E, Hardwick SW, Chirgadze DY, Hubbard J, van den Berg B, Newman H

EMDB-52755:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 13)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

EMDB-52896:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 16)
Method: single particle / : Allyjaun S, Newman H, Chirgadze DY, Hardwick SW, Hubbard J, van den Berg B, Dunbar E

PDB-9i92:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 1)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i93:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 2)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i94:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 3)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i95:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 4)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i96:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 5)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9i97:
Cryo-EM structure of Shigella flexneri LptDE in complex with a Bicyclic Peptide binder (Compound 12)
Method: single particle / : Allyjaun S, Dunbar E, Hardwick SW, Chirgadze DY, Hubbard J, van den Berg B, Newman H

PDB-9i98:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 13)
Method: single particle / : Allyjaun S, Newman H, Dunbar E, Hardwick SW, Chirgadze DY, van den Berg B, Hubbard J

PDB-9q8n:
Cryo-EM structure of Shigella flexneri LptDE bound by a Bicyclic peptide molecule (Compound 16)
Method: single particle / : Allyjaun S, Newman H, Chirgadze DY, Hardwick SW, Hubbard J, van den Berg B, Dunbar E

EMDB-48725:
Structure of Xenopus KCNQ1-CaM in GDN
Method: single particle / : Kyriakis E, Russo S, Molinarolo S, Eldstrom J, Van Petegem F, Fedida D

EMDB-48726:
Structure of Xenopus KCNQ1(E150R/R221E)-CaM with the VSD in the intermediate state
Method: single particle / : Kyriakis E, Russo S, Molinarolo S, Eldstrom J, Van Petegem F, Fedida D

PDB-9my3:
Structure of Xenopus KCNQ1-CaM in GDN
Method: single particle / : Kyriakis E, Russo S, Molinarolo S, Eldstrom J, Van Petegem F, Fedida D

PDB-9my4:
Structure of Xenopus KCNQ1(E150R/R221E)-CaM with the VSD in the intermediate state
Method: single particle / : Kyriakis E, Russo S, Molinarolo S, Eldstrom J, Van Petegem F, Fedida D

EMDB-47490:
Cryo-EM structure of the human P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

EMDB-47491:
Cryo-EM structure of the human P2X7 receptor in the ATP-bound open state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

EMDB-47492:
Cryo-EM structure of the human P2X7 receptor in the UB-ALT-P30-bound inhibited state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

EMDB-47493:
Cryo-EM structure of the human P2X7 receptor in the UB-MBX-46-bound inhibited state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

EMDB-47494:
Cryo-EM structure of the mouse P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

PDB-9e3m:
Cryo-EM structure of the human P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

PDB-9e3n:
Cryo-EM structure of the human P2X7 receptor in the ATP-bound open state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

PDB-9e3o:
Cryo-EM structure of the human P2X7 receptor in the UB-ALT-P30-bound inhibited state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

PDB-9e3p:
Cryo-EM structure of the human P2X7 receptor in the UB-MBX-46-bound inhibited state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

PDB-9e3q:
Cryo-EM structure of the mouse P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Turcu AL, Vazquez S, Mansoor SE

EMDB-46466:
Map of endoH-treated hemagglutinin A/Sing/INFIMH/16
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

EMDB-46477:
Map of influenza hemagglutinin A/Sing/INFIMH/16 expressed in GntI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-46500:
Map of hemagglutinin A/Sing/INFIMH/16 expressed in 293F cells
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

PDB-9d0y:
Map of endoH-treated hemagglutinin A/Sing/INFIMH/16
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

PDB-9d1u:
Map of influenza hemagglutinin A/Sing/INFIMH/16 expressed in GntI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9d2m:
Map of hemagglutinin A/Sing/INFIMH/16 expressed in 293F cells
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

EMDB-45997:
Hemagglutinin A/Hong Kong/1/68 produced in GnTI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-45998:
Endo H-treated hemagglutinin A/Hong Kong/1/68
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9cxt:
Hemagglutinin A/Hong Kong/1/68 produced in GnTI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9cxu:
Endo H-treated hemagglutinin A/Hong Kong/1/68
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-54211:
Structure of the Ypt7 GEF complex Mon1-Ccz1 from Chaetomium Thermophilum
Method: single particle / : Wilmes S, Schaefer J, Moeller A, Kuemmel D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more