[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,587 items for (author: qu & he)

EMDB-66217:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-66218:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-55847:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

PDB-9tey:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

EMDB-75152:
Nucleosome containing an 8oxoG:A at SHL-6
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75153:
Nucleosome containing an 8oxoG:A at SHL+4
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75154:
Nucleosome containing an 8oxoG:A at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75155:
Nucleosome containing an 8oxoG:A at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75156:
Nucleosome containing an 8oxoG at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75157:
Nucleosome containing an 8oxoG at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-73877:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73882:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73883:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7q:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7v:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7x:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-54410:
Icosahedral reconstruction of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54411:
Chikungunya virus-like particle trimer 1
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54412:
Chikungunya virus-like particle trimer 2
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54413:
Composite density map of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-72520:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72521:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72522:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72523:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5r:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5s:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5t:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5u:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-53911:
Cryo-ET structure of N-terminally truncated membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

PDB-9rc1:
Cryo-ET structure of N-terminally truncated membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

EMDB-53909:
Cryo-ET structure of full-length membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

PDB-9rbu:
Cryo-ET structure of full-length membrane-bound EHD2 complex
Method: subtomogram averaging / : Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O

EMDB-75432:
The CryoEM structure of T8 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75433:
The CryoEM structure of T10 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10se:
The CryoEM structure of T8 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sf:
The CryoEM structure of T10 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-74892:
Quasibacillus thermotolerans T=4 encapsulin pore mutant variant Glass 9
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

EMDB-74904:
Quasibacillus thermotolerans T=4 encapsulin pore mutant variant Letter11
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

EMDB-74905:
Quasibacillus thermotolerans T=3 encapsulin pore mutant variant Letter11
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

PDB-9zvv:
Quasibacillus thermotolerans T=4 encapsulin pore mutant variant Glass 9
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

PDB-9zw3:
Quasibacillus thermotolerans T=4 encapsulin pore mutant variant Letter11
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

PDB-9zw4:
Quasibacillus thermotolerans T=3 encapsulin pore mutant variant Letter11
Method: single particle / : Andreas MP, Siddiquee R, Giessen TW, Lau YH

EMDB-72934:
HCoV-HKU1 C S 2P in complex with H501-008 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72935:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 1, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72936:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 2, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72937:
HCoV-HKU1 C S 2P in complex with H501-018 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72938:
HCoV-HKU1 C S 2P in complex with H501-022 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more