[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 360 items for (author: patel & na)

EMDB-47792:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-47793:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9d:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9e:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-53437:
The structure of ADGRL4 in the active-state
Method: single particle / : Chen Q, Favara DM

PDB-9qxl:
The structure of ADGRL4 in the active-state
Method: single particle / : Chen Q, Favara DM

EMDB-45440:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

PDB-9cca:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

EMDB-71130:
A2AR-BRIL + ZM241385 + PGD2
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

EMDB-71131:
A2AR-BRIL in complex with ZM241385
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

PDB-9p1s:
A2AR-BRIL in complex with ZM241385 and PGD2
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

PDB-9p1t:
A2AR-BRIL in complex with ZM241385
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-49911:
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49915:
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49922:
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49934:
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

PDB-9nxx:
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

PDB-9ny1:
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

PDB-9ny5:
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

PDB-9nyg:
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

EMDB-53487:
human FAM118B trimeric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

EMDB-53488:
human FAM118B pentameric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

EMDB-53555:
Human FAM118B(34-334) 2 protomers
Method: single particle / : Missoury S, Coste F, Baretic D, Patel K, Delarue M, Ahel I, Suskiewicz MJ

PDB-9r0p:
human FAM118B trimeric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

PDB-9r0s:
human FAM118B pentameric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

PDB-9r3e:
Human FAM118B(34-334) 2 protomers
Method: single particle / : Missoury S, Coste F, Baretic D, Patel K, Delarue M, Ahel I, Suskiewicz MJ

EMDB-70812:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

EMDB-70813:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

PDB-9osw:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

PDB-9osy:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

EMDB-49874:
CryoET tomogram of hESC-derived retinal ganglion cell treated with calcification media
Method: electron tomography / : Hou C, Wu GH, Patel HR, Liao YJ, Chiu W

EMDB-49875:
CryoET tomogram of hESC-derived retinal ganglion cell treated with potassium phosphate
Method: electron tomography / : Hou C, Wu GH, Patel HR, Liao YJ, Chiu W

EMDB-53281:
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53282:
Single particle cryo-EM structure of MdtF V610F
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53283:
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qpr:
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qps:
Single particle cryo-EM structure of MdtF V610F
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qpt:
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-18466:
Symmetric structure of Satellite Tobacco Necrosis Virus-Like Particle with PS1-5 gRNA
Method: single particle / : Javed A, Mata PC, Stockley P

EMDB-46757:
Cryo-electron tomography of amorphous alpha-synuclein aggregates with embedded membranes and a lipid droplet
Method: electron tomography / : Jaber N, Dai W

EMDB-46764:
Mitochondrial membrane with external amorphous alpha-synuclein aggregate
Method: electron tomography / : Jaber N, Dai W

EMDB-44540:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC)
Method: single particle / : Guo Y, Borek D

EMDB-44542:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC) bound to UDP
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9bhc:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC)
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9bhe:
Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC) bound to UDP
Method: single particle / : Guo Y, Borek D, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-48188:
SARS-CoV-2 Wuhan Spike ectodomain in complex with human polyclonal antibody ModWu-RBD1 (mRNA-1273 vaccine)
Method: single particle / : Ward AB, Bangaru S, Jackson AM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more