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Showing 1 - 50 of 82 items for (author: negi & h)

EMDB-63507:
Cryo-EM structure of the chromatin remodeler Rad26 N-terminal deletion mutant bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Haruhiko E, Sekine S, Kagawa W, Kurumizaka H

EMDB-63262:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

PDB-9lox:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

EMDB-71737:
Human 19S proteasome bound to TXNL1 PITH domain without C-terminus
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71740:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71741:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71791:
Human 19S proteasome regulatory particle (RP) without observing TXNL1 PITH domain bound
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71795:
Human 19S proteasome regulatory particle (RP) without observing TXNL1 PITH domain bound but with extra density adjacent to RPT1/RPT2
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71810:
Human 19S proteasome bound to TXNL1 PITH domain and PSMD5
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-71813:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76283:
Human 19S proteasome bound to TXNL1 PITH domain state 2
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-76415:
Human 19S proteasome regulatory particle bound to TXNL1 PITH domain and p28
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-12bm:
Human 19S proteasome bound to TXNL1 PITH domain state 2
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmj:
Human 19S proteasome bound to TXNL1 PITH domain without C-terminus
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmo:
Human 26S proteasome bound to TXNL1 with opened gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pmq:
Human 26S proteasome bound to TXNL1 with closed gate of core particle
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9pro:
Human 19S proteasome bound to TXNL1 PITH domain and PSMD5
Method: single particle / : Chen X, Negi H, Walters KJ

PDB-9prt:
Human 19S proteasome bound to TXNL1 PITH domain but with low density for RPT1, RPT2, and RPN1
Method: single particle / : Chen X, Negi H, Walters KJ

EMDB-66436:
Cryo-EM Structure of Turbo sazae ferritin chain A
Method: single particle / : Namikawa Y, Suzuki M

EMDB-66437:
Cryo-EM Structure of Turbo sazae ferritin chain B
Method: single particle / : Namikawa Y, Suzuki M

PDB-9x0k:
Cryo-EM Structure of Turbo sazae ferritin chain A
Method: single particle / : Namikawa Y, Suzuki M

PDB-9x0l:
Cryo-EM Structure of Turbo sazae ferritin chain B
Method: single particle / : Namikawa Y, Suzuki M

EMDB-62427:
Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417
Method: single particle / : Katsura K, Matsumoto T, Shirouzu M

PDB-9kmc:
Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417
Method: single particle / : Katsura K, Matsumoto T, Shirouzu M

EMDB-61242:
Cryo-EM structure of native NCP-UV-DDB complex
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61243:
Cryo-EM structure of NCP-UV-DDB complex containing CPD
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61246:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-2
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61247:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-3
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61248:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-6
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

PDB-9j8w:
Cryo-EM structure of NCP-UV-DDB complex containing CPD
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-38604:
RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38607:
RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38624:
RNA polymerase II elongation complex transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-38717:
RNA polymerase II elongation complex with downstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xrj:
RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xrm:
RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xso:
RNA polymerase II elongation complex transcribing genomic DNA extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

PDB-8xvs:
RNA polymerase II elongation complex with downstream nucleosome extracted from human nuclei
Method: single particle / : Kujirai T, Kato J, Yamamoto K, Hirai S, Negishi L, Ogasawara M, Takizawa Y, Kurumizaka H

EMDB-63078:
Cryo-EM structure of the native HeLa nucleosome
Method: single particle / : Hatazawa S, Takizawa Y, Kurumizaka H

EMDB-63079:
Cryo-EM structure of the native HeLa nucleosome in poly-nucleosomes (class 1)
Method: single particle / : Hatazawa S, Takizawa Y, Kurumizaka H

EMDB-63080:
Cryo-EM structure of the native HeLa nucleosome in poly-nucleosomes (class 2)
Method: single particle / : Hatazawa S, Takizawa Y, Kurumizaka H

EMDB-63081:
Cryo-EM structure of the native HeLa nucleosome in poly-nucleosomes (class 3)
Method: single particle / : Hatazawa S, Takizawa Y, Kurumizaka H

EMDB-63144:
Subtomogram average of the HeLa nucleosome
Method: subtomogram averaging / : Hatazawa S, Fukuda Y, Takizawa Y, Kurumizaka H

EMDB-63145:
Subtomogram average of the HeLa nucleosome for mapping back
Method: subtomogram averaging / : Hatazawa S, Fukuda Y, Takizawa Y, Kurumizaka H

EMDB-37121:
Structure of nucleosome complexed with one DEK molecule
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-37149:
Structure of H1.2 bound to the nucleosome
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

PDB-8kd1:
Structure of nucleosome complexed with one DEK molecule
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

PDB-8ke0:
Structure of H1.2 bound to the nucleosome
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-37115:
Structure of nucleosome complexed with two DEK molecules
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-38443:
193 bp Widom601L nucleosome (closed)
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

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