[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 60 items for (author: marlovits & tc)

EMDB-53133:
F-actin decorated by ITPKA
Method: helical / : Yuan B, Paraschiakos T, Windhorst S, Marlovits TC

EMDB-49494:
Thermothelomyces thermophilus SAM complex closed conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-49495:
Thermothelomyces thermophilus SAM complex open conformation
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-49496:
Thermothelomyces thermophilus SAM complex bound to darobactin A
Method: single particle / : Diederichs K, Botos I, Buchanan SK

EMDB-18866:
Phalloidin bound F-actin
Method: helical / : Yuan B, Paraschiakos T, Windhorst S, Marlovits TC

EMDB-50840:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Blaas D, Marlovits TC

EMDB-50844:
CryoEM structure of RV-A89
Method: single particle / : Wald J, Blaas D, Marlovits TC

EMDB-16424:
F-actin decorated by SipA497-669
Method: helical / : Yuan B, Wald J, Marlovits TC

EMDB-16425:
F-actin decorated by SipA426-685
Method: helical / : Yuan B, Wald J, Marlovits TC

EMDB-16805:
Cryo-EM structure of PcrV/Fab(30-B8)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-16807:
Cryo-EM structure of PcrV/Fab(11-E5)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-15362:
Cryo-EM structure of Darobactin 22 bound BAM complex
Method: single particle / : Yuan B, Marlovits TC

EMDB-15363:
Cryo-EM structure of Darobactin 9 bound BAM complex
Method: single particle / : Yuan B, Marlovits TC

EMDB-15085:
RuvAB branch migration motor complexed to the Holliday junction - composite map 1 and 2
Method: single particle / : Wald J, Marlovits TC

EMDB-13294:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13295:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13296:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13297:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13298:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13299:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13300:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13301:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13302:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t1 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13303:
RuvAB branch migration motor complexed to the Holliday junction - RuvA-HJ core [t2 dataset]
Method: single particle / : Wald J, Marlovits TC

EMDB-13304:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ half [dataset t2]
Method: single particle / : Wald J, Marlovits TC

EMDB-13305:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ pseudo half [dataset t2]
Method: single particle / : Wald J, Marlovits TC

EMDB-15126:
RuvAB branch migration motor complexed to the Holliday junction - full tripartite particle [dataset t2]
Method: single particle / : Wald J, Marlovits TC

EMDB-13542:
HsPepT1 bound to Ala-Phe in the outward facing occluded conformation
Method: single particle / : Killer M, Wald J

EMDB-13543:
HsPepT1 bound to Ala-Phe in the outward facing open conformation
Method: single particle / : Killer M, Wald J

EMDB-13544:
HsPepT2 bound to Ala-Phe in the inward facing partially occluded conformation
Method: single particle / : Killer M, Wald J

EMDB-13545:
Apo HsPepT1 in the outward facing open conformation
Method: single particle / : Killer M, Wald J

EMDB-13054:
Cryo-EM structure of nonameric EPEC SctV-C
Method: single particle / : Yuan B, Wald J, Fahrenkamp D, Marlovits TC

EMDB-11311:
Structure of the Salmonella PrgI needle filament attached to the basal body
Method: helical / : Kotov V, Lunelli M, Wald J, Kolbe M, Marlovits TC

EMDB-11312:
Structure of the Shigella MxiH needle filament attached to the basal body
Method: helical / : Lunelli M, Kotov V

EMDB-12514:
Structure of an intact ESX-5 inner membrane complex, C1 symmetry
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12517:
Structure of an intact ESX-5 inner membrane complex, C3 symmetry
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12521:
MycP5-free ESX-5 inner membrane complex, state I
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12522:
MycP5-free ESX-5 inner membrane complex, State II
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12518:
Structure of the periplasmic assembly from the ESX-5 inner membrane complex, C1 symmetry
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12519:
Periplasmic assembly of the intact ESX-5 inner membrane complex, C3 symmetry
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12520:
Cytosolic bridge of an intact ESX-5 inner membrane complex
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12523:
Structure of an intact ESX-5 inner membrane complex, EccC5 extended
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-12525:
Structure of an intact ESX-5 inner membrane complex, EccC contracted
Method: single particle / : Bunduc CM, Fahrenkamp D, Wald J, Ummels R, Bitter W, Houben ENG, Marlovits TC

EMDB-11780:
Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium
Method: single particle / : Marlovits T

EMDB-11781:
Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1
Method: single particle / : Marlovits T

EMDB-10220:
Cryo-EM structure of rhinovirus-B5 complexed to antiviral OBR-5-340
Method: single particle / : Wald J, Goessweiner-Mohr N

EMDB-10221:
Cryo-EM structure of rhinovirus-B5
Method: single particle / : Wald J, Goessweiner-Mohr N

EMDB-10222:
Cryo-EM structure of rhinovirus-A89
Method: single particle / : Wald J, Goessweiner-Mohr N

EMDB-3596:
The structure of the ESX-5 mycobacterial type VII secretion system membrane complex
Method: single particle / : Ciccarelli L, Marlovits TC

EMDB-2480:
Tomogram of Injectisome (wild type) from Salmonella typhiumurium (substrate trapped) in situ
Method: electron tomography / : Radics J, Konigsmaier L, Marlovits TC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more