[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 248 items for (author: ling & sl)

EMDB-18592:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

PDB-8qqi:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

PDB-8sx3:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-41277:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

EMDB-41278:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

EMDB-43766:
Kir6.2-Q52R/SUR1 apo closed channel
Method: single particle / : Driggers CM, Shyng SL

EMDB-19024:
Structure of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19025:
Structure of the five-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19026:
Structure of the three-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19027:
Structure of the two-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-41374:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41382:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

EMDB-41399:
Antibody N3-1 bound to SARS-CoV-2 spike
Method: single particle / : Hsieh CL, McLellan JS

PDB-8tm1:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

PDB-8tma:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

EMDB-37716:
Human calcium-sensing receptor bound with cinacalcet in detergent
Method: single particle / : Ling SL, Meng XY, Tian CL

EMDB-37724:
Human calcium-sensing receptor(CaSR) bound to cinacalcet in complex with Gq protein
Method: single particle / : Ling SL, Meng XY, Tian CL

EMDB-16328:
Outer membrane attachment porin OmpM1 from Veillonella parvula
Method: single particle / : Silale A, van den Berg B

EMDB-16332:
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Method: single particle / : Silale A, van den Berg B

EMDB-16333:
Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Method: single particle / : Silale A, van den Berg B

PDB-8bym:
Outer membrane attachment porin OmpM1 from Veillonella parvula
Method: single particle / : Silale A, van den Berg B

PDB-8bys:
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Method: single particle / : Silale A, van den Berg B

PDB-8byt:
Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Method: single particle / : Silale A, van den Berg B

EMDB-28036:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

PDB-8edm:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

EMDB-17383:
Tau filaments extracted from human brain with the DeltaK281 mutation in MAPT
Method: helical / : Schweighauser M, Garringer HJ, Klingstedt T, Masuda-Suzukake M, Murrell JR, Vidal R, Scheres SHW, Goedert M, Ghetti B, Newell KL

EMDB-17539:
Cryo-EM structure of dimeric UBR5
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA
Method: single particle / : Aguirre JD, Cavadini S, Kempf G, Kater L, Thoma NH

EMDB-15288:
Substrate-free levan utilisation machinery (utilisome)
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-15289:
Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-15290:
Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-15291:
Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-15292:
Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-15293:
Consensus reconstruction of the dextran utilisation system
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8a9y:
Substrate-free levan utilisation machinery (utilisome)
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa0:
Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa1:
Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa2:
Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa3:
Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

PDB-8aa4:
SusC components of the dextran utilisation system (utilisome)
Method: single particle / : White JBR, Silale A, Ranson NA, van den Berg B

EMDB-33497:
Neurokinin A bound to active human neurokinin 2 receptor in complex with G324
Method: single particle / : Sun WJ, Yuan QN, Zhang HH, Yang F, Ling SL, Lv P, Eric X, Tian CL, Yin WC, Shi P

EMDB-29502:
Fast and versatile sequence- independent protein docking for nanomaterials design using RPXDock
Method: single particle / : Skotheim R, Borst AJ, Baker D

PDB-8fwd:
Fast and versatile sequence- independent protein docking for nanomaterials design using RPXDock
Method: single particle / : Skotheim R, Borst AJ, Baker D

EMDB-27826:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

PDB-8e20:
Cryo-EM structure of the full-length human NF1 dimer
Method: single particle / : Darling JE, Merk A, Grisshammer R, Ognjenovic J

EMDB-29396:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Method: single particle / : Wang S, Kwong PD

EMDB-29836:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-29880:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)
Method: single particle / : Changela A, Gorman J, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more