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Showing 1 - 50 of 143 items for (author: kimura & y)

EMDB-60059:
Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications
Method: single particle / : Ishiguro K, Yokoyama T, Shirouzu M, Ito T, Suzuki T

EMDB-60060:
Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications
Method: single particle / : Ishiguro K, Yokoyama T, Shirouzu M, Ito T, Suzuki T

EMDB-63714:
Structure of photosynthetic LH1-RC complex the Halophilic Nonsulfur Purple Bacterium, Rhodothalassium salexigens
Method: single particle / : Tani K, Kanno R, Inami M, Ooya T, Matsushita R, Minamino A, Takenaka S, Takaichi S, Purba ER, Hall M, Mochizuki T, Yu LJ, Mizoguchi A, Humbel BM, Madigan MT, Kimura Y, Wang-Otomo ZY

EMDB-64946:
Map including micelle density from the photosynthetic LH1-RC complex of the halophilic nonsulfur purple bacterium Rhodothalassium salexigens
Method: single particle / : Tani K, Kanno R, Inami M, Ooya T, Matsushita R, Inada K, Takenaka S, Takaichi S, Purba ER, Hall M, Mochizuki T, Yu LJ, Mizoguchi A, Humbel BM, Madigan MT, Kimura Y, Wang-Otomo ZY

PDB-9m8m:
Structure of photosynthetic LH1-RC complex the Halophilic Nonsulfur Purple Bacterium, Rhodothalassium salexigens
Method: single particle / : Tani K, Kanno R, Inami M, Ooya T, Matsushita R, Minamino A, Takenaka S, Takaichi S, Purba ER, Hall M, Mochizuki T, Yu LJ, Mizoguchi A, Humbel BM, Madigan MT, Kimura Y, Wang-Otomo ZY

EMDB-61076:
KU13-bond Mycobacterium tuberculosis 70S ribosome
Method: single particle / : Nishihara D, Fujino M, Tanaka Y, Yokoyama T

PDB-9j1m:
KU13-bond Mycobacterium tuberculosis 70S ribosome
Method: single particle / : Nishihara D, Fujino M, Tanaka Y, Yokoyama T

EMDB-37121:
Structure of nucleosome complexed with one DEK molecule
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-37149:
Structure of H1.2 bound to the nucleosome
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

PDB-8kd1:
Structure of nucleosome complexed with one DEK molecule
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

PDB-8ke0:
Structure of H1.2 bound to the nucleosome
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-37115:
Structure of nucleosome complexed with two DEK molecules
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-38443:
193 bp Widom601L nucleosome (closed)
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-38444:
193 bp Widom601L nucleosome (middle)
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-38445:
193 bp Widom601L nucleosome (open)
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

PDB-8kcy:
Structure of nucleosome complexed with two DEK molecules
Method: single particle / : Kujirai T, Echigoya K, Takizawa Y, Kurumizaka H

EMDB-39835:
Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Nagashima KVP, Kanno R, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

PDB-8z81:
Photosynthetic LH2-LH1 complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Nagashima KVP, Kanno R, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

EMDB-39836:
Photosynthetic LH1-RC-HiPIP complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Kanno R, Nagashima KVP, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

EMDB-39837:
Photosynthetic LH1-RC complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Kanno R, Nagashima KVP, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

PDB-8z82:
Photosynthetic LH1-RC-HiPIP complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Kanno R, Nagashima KVP, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

PDB-8z83:
Photosynthetic LH1-RC complex from the purple bacterium Halorhodospira halophila
Method: single particle / : Tani K, Kanno R, Nagashima KVP, Hiwatashi N, Kawakami M, Nakata K, Nagashima S, Inoue K, Takaichi S, Purba ER, Hall M, Yu LJ, Madigan MT, Mizoguchi A, Humbel BM, Kimura Y, Wang-Otomo ZY

EMDB-60158:
Cryo-EM structure of photosynthetic LH1' complex of Roseospirillum parvum
Method: single particle / : Wang GL, Wang XP, Yu LJ

EMDB-60165:
Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum
Method: single particle / : Wang GL, Wang XP, Yu LJ

PDB-8zjw:
Cryo-EM structure of photosynthetic LH1' complex of Roseospirillum parvum
Method: single particle / : Wang GL, Wang XP, Yu LJ

PDB-8zk2:
Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum
Method: single particle / : Wang GL, Wang XP, Yu LJ

EMDB-61095:
Structure of photosynthetic LH1-RC complex from the purple bacterium Blastochloris tepida
Method: single particle / : Kimura Y, Kanno R, Mori K, Matsuda Y, Seto R, Takenaka S, Mino H, Ohkubo T, Honda M, Sasaki YC, Kishikawa J, Mitsuoka K, Mio K, Hall M, Purba ER, Mochizuki T, Mizoguchi A, Humbel BM, Madigan MT, Wang-Otomo ZY, Tani K

PDB-9j2f:
Structure of photosynthetic LH1-RC complex from the purple bacterium Blastochloris tepida
Method: single particle / : Kimura Y, Kanno R, Mori K, Matsuda Y, Seto R, Takenaka S, Mino H, Ohkubo T, Honda M, Sasaki YC, Kishikawa J, Mitsuoka K, Mio K, Hall M, Purba ER, Mochizuki T, Mizoguchi A, Humbel BM, Madigan MT, Wang-Otomo ZY, Tani K

EMDB-60274:
SARS-CoV-2 XBB.1.5 spike glycoprotein trimer in complex with antigen-binding fragments (Fabs)
Method: single particle / : Sugita Y, Kimura K, Noda T, Hashiguchi T

EMDB-39577:
E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

EMDB-39578:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

EMDB-39579:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

EMDB-39580:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

EMDB-39581:
E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

PDB-8yuo:
E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

PDB-8yup:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

PDB-8yuq:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

PDB-8yur:
E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

PDB-8yus:
E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA
Method: single particle / : Akiyama N, Ishiguro K, Shirouzu M, Suzuki T

EMDB-37910:
Structure of the SARS-CoV-2 BA.2.86 spike glycoprotein (closed state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38459:
Structure of the SARS-CoV-2 BA.2.86 spike protein (1-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38686:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38687:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up and 1-down state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38688:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38689:
Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (down state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-38690:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (3-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-60886:
Structure of SARS-CoV-2 JN.1 spike RBD in complex with ACE2 (up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-60904:
Structure of SARS-CoV-2 JN.1 spike glycoprotein in complex with ACE2 (2-up state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-60905:
Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (1 highly-open RBD and 1 partially-open RBD)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

EMDB-60906:
Structure of SARS-CoV-2 JN.1 spike glycoprotein in complex with ACE2 (2-up and 1-down state)
Method: single particle / : Yajima H, Anraku Y, Kita S, Kimura K, Maenaka K, Hashiguchi T

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