[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 103 items for (author: huynh & k)

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

PDB-9oal:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dhw:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9dim:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-63903:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

EMDB-63933:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

PDB-9u6e:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

PDB-9u7a:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

EMDB-46504:
Cryo-EM structure of mycocerosic acid synthase with double KS-ACP crosslinking using C16 alpha-bromoamide. Complex A
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

EMDB-46505:
Cryo-EM structure of mycocerosic acid synthase with single KS-ACP crosslink using C16 alpha-bromoamide. Complex B
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

EMDB-46506:
Cryo-EM structure of mycocerosic acid synthase with a single DH-ACP crosslink using C16 alpha-bromoamide. Complex C
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

EMDB-46507:
Cryo-EM structure of mycocerosic acid synthase with KS-ACP' crosslink and DH-ACP crosslink using C16 alpha-bromoamide. Complex D
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

PDB-9d2y:
Cryo-EM structure of mycocerosic acid synthase with double KS-ACP crosslinking using C16 alpha-bromoamide. Complex A
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

PDB-9d2z:
Cryo-EM structure of mycocerosic acid synthase with single KS-ACP crosslink using C16 alpha-bromoamide. Complex B
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

PDB-9d30:
Cryo-EM structure of mycocerosic acid synthase with a single DH-ACP crosslink using C16 alpha-bromoamide. Complex C
Method: single particle / : Heberlig GW, Jiang Z, Burkart MD

EMDB-52437:
PSMA in complex with nanobody 37
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

PDB-9hvl:
PSMA in complex with nanobody 37
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

EMDB-52273:
Prostate Specific Membrane Antigen (PSMA) in complex with nanobody7
Method: single particle / : Alon G, Papo N, Zarivach R, Zalk R

EMDB-52435:
PSMA in complex with nanobody 8
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

EMDB-52436:
PSMA in complex with nanobody 7 and 8
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

EMDB-52439:
PSMA without nanobody
Method: single particle / : Zalk R, Alon G, Papo N, Zarivach R

PDB-9hlw:
Prostate Specific Membrane Antigen (PSMA) in complex with nanobody7
Method: single particle / : Alon G, Papo N, Zarivach R, Zalk R

PDB-9hvi:
PSMA in complex with nanobody 8
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

PDB-9hvk:
PSMA in complex with nanobody 7 and 8
Method: single particle / : Alon G, Zalk R, Huynh TT, Zalutsky MR, Weizmann Y, Zarivach R, Papo N

EMDB-48707:
Clostridioides difficile Toxin A with mCDIFA-248-25 Fab
Method: single particle / : Huynh KW, Ammirati M, Kroh HK, Lacy DB, Han S

PDB-9mx1:
Clostridioides difficile Toxin A with mCDIFA-248-25 Fab
Method: single particle / : Huynh KW, Ammirati M, Kroh HK, Lacy DB, Han S

EMDB-49208:
Consensus map of the autoinhibitory unliganded CD163 trimer (map A)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49209:
Local map of the autoinhibitory unliganded CD163 trimer (map B)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49210:
Local map of the autoinhibitory unliganded CD163 trimer (map C)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49211:
Local map of the autoinhibitory unliganded CD163 trimer (map D)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49212:
Local map of the autoinhibitory unliganded CD163 trimer (map E)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49213:
Composite map of the autoinhibitory unliganded CD163 trimer (map F)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49214:
Consensus map of the CD163/Hp(1-1)Hb complex (Map G)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49215:
Local map of the CD163/Hp(1-1)Hb complex (Map H)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49216:
Local map of the CD163/Hp(1-1)Hb complex (Map I)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49217:
Local map of the CD163/Hp(1-1)Hb complex (Map J)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49218:
Composite map of the CD163/Hp(1-1)Hb complex (Map K)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49219:
Consensus map of the CD163/HpSPHb complex (Map L)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49220:
Local map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49221:
Composite map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

PDB-9nb5:
Cryo-EM structure of the autoinhibitory CD163 trimer
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb6:
Cryo-EM structure of the CD163/Hp(1-1)Hb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb8:
Cryo-EM structure of the CD163/HpSPHb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

EMDB-48928:
Cryo-EM map of APC/C-CDC20-UBE2C-H2A/H2B crosslinked complex
Method: single particle / : Skrajna A, Bordrug T, Brown NG, McGinty RK

EMDB-48984:
Cryo-EM map of APC/C-CDC20-UBE2C-H3/H4 crosslinked complex
Method: single particle / : Skrajna A, Bordrug T, Brown NG, McGinty RK

PDB-9n9r:
Model of APC/C-CDC20-UBE2C from H2A/H2B-bound complex
Method: single particle / : Skrajna A, Bodrug T, Brown NG, McGinty RK

PDB-9n9s:
Model of APC/C-CDC20-UBE2C from H3/H4-bound complex
Method: single particle / : Skrajna A, Bodrug T, Brown NG, McGinty RK

EMDB-42524:
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Method: single particle / : Huynh KW, Chang JS, Fennell KF, Che Y, Wu H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more