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Structure paper

TitleStructural elucidation of the haptoglobin-hemoglobin clearance mechanism by macrophage scavenger receptor CD163
Journal, issue, pagesTo Be Published
Publish dateFeb 13, 2025 (structure data deposition date)
AuthorsHuang C-S / Wang H / White JBR / Degtjarik O / Huynh C / Brannstrom K / Horn MT / Muench SP / Somers WS / Chaparro-Riggers J ...Huang C-S / Wang H / White JBR / Degtjarik O / Huynh C / Brannstrom K / Horn MT / Muench SP / Somers WS / Chaparro-Riggers J / Lin L / Mosyak L
External linksSearch PubMed
MethodsEM (single particle)
Resolution3.0 - 4.1 Å
Structure data

EMDB-49208: Consensus map of the autoinhibitory unliganded CD163 trimer (map A)
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-49209: Local map of the autoinhibitory unliganded CD163 trimer (map B)
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-49210: Local map of the autoinhibitory unliganded CD163 trimer (map C)
Method: EM (single particle) / Resolution: 3.5 Å

EMDB-49211: Local map of the autoinhibitory unliganded CD163 trimer (map D)
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-49212: Local map of the autoinhibitory unliganded CD163 trimer (map E)
Method: EM (single particle) / Resolution: 3.1 Å

49213

9nb5

EMDB-49213: Composite map of the autoinhibitory unliganded CD163 trimer (map F)
PDB-9nb5: Cryo-EM structure of the autoinhibitory CD163 trimer
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-49214: Consensus map of the CD163/Hp(1-1)Hb complex (Map G)
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-49215: Local map of the CD163/Hp(1-1)Hb complex (Map H)
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-49216: Local map of the CD163/Hp(1-1)Hb complex (Map I)
Method: EM (single particle) / Resolution: 3.4 Å

EMDB-49217: Local map of the CD163/Hp(1-1)Hb complex (Map J)
Method: EM (single particle) / Resolution: 3.5 Å

49218

9nb6

EMDB-49218: Composite map of the CD163/Hp(1-1)Hb complex (Map K)
PDB-9nb6: Cryo-EM structure of the CD163/Hp(1-1)Hb complex
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-49219: Consensus map of the CD163/HpSPHb complex (Map L)
Method: EM (single particle) / Resolution: 4.0 Å

EMDB-49220: Local map of the CD163/HpSPHb complex (Map M)
Method: EM (single particle) / Resolution: 4.1 Å

49221

9nb8

EMDB-49221: Composite map of the CD163/HpSPHb complex (Map M)
PDB-9nb8: Cryo-EM structure of the CD163/HpSPHb complex
Method: EM (single particle) / Resolution: 4.0 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-OXY:
OXYGEN MOLECULE

Source
  • homo sapiens (human)
KeywordsENDOCYTOSIS / CD163 / M130 / Scavenger receptor / Haptoglobin / Hemoglobin / Hb / Hp / HpHb / Hp(1-1)Hb / hemolysis

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