[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 361 items for (author: huang & sm)

EMDB-46692:
S. thermophilus class III ribonucleotide reductase signal subtracted cone domains and core
Method: single particle / : Andree GA, Drennan CL

EMDB-46693:
S. thermophilus class III ribonucleotide reductase focused refined core
Method: single particle / : Andree GA, Drennan CL

EMDB-46696:
S. thermophilus class III ribonucleotide reductase consensus
Method: single particle / : Andree GA, Drennan CL

EMDB-46698:
S. thermophilus class III ribonucleotide reductase with dATP and TTP
Method: single particle / : Andree GA, Drennan CL

EMDB-46712:
S. thermophilus class III ribonucleotide reductase signal subtracted cone domains and core
Method: single particle / : Andree GA, Drennan CL

EMDB-46713:
S. thermophilus class III ribonucleotide reductase focused refined core
Method: single particle / : Andree GA, Drennan CL

EMDB-46746:
S. thermophilus class III ribonucleotide reductase consensus
Method: single particle / : Andree GA, Drennan CL

EMDB-46747:
S. thermophilus class III ribonucleotide reductase with ATP and TTP
Method: single particle / : Andree GA, Drennan CL

PDB-9dau:
S. thermophilus class III ribonucleotide reductase with dATP and TTP
Method: single particle / : Andree GA, Drennan CL

PDB-9dca:
S. thermophilus class III ribonucleotide reductase with ATP and TTP
Method: single particle / : Andree GA, Drennan CL

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-45530:
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Method: single particle / : Niu L, Tolbert WD, Pazgier M

PDB-9cf5:
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Method: single particle / : Niu L, Tolbert WD, Pazgier M

EMDB-49373:
CryoEM Structure of De Novo Antibody Fragment scFv 6 with C. difficile Toxin B (TcdB)
Method: single particle / : Weidle C, Borst AJ

EMDB-49405:
CryoEM Structure of De Novo VHH, VHH_flu_01, bound to influenza HA, strain A/USA:Iowa/1943 H1N1
Method: single particle / : Borst AJ, Weidle C

EMDB-70451:
SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 complex closed conformation
Method: single particle / : Chandravanshi M, Niu L, Tolbert WD, Pazgier M

EMDB-70453:
SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 complex 1 RBD up conformation
Method: single particle / : Chandravanshi M, Niu L, Tolbert WD, Pazgier M

EMDB-70454:
Apo SARS-COV-2-6P-MUT7 S PROTEIN closed conformation
Method: single particle / : Niu L, Chandravanshi M, Tolbert WD, Pazgier M

EMDB-70455:
APO SARS-COV-2-6P-MUT7 S PROTEIN 1 RBD UP CONFORMATION
Method: single particle / : Niu L, Chandravanshi M, Tolbert WD, Pazgier M

PDB-9og4:
SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 complex closed conformation
Method: single particle / : Chandravanshi M, Niu L, Tolbert WD, Pazgier M

PDB-9og5:
SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 complex 1 RBD up conformation
Method: single particle / : Chandravanshi M, Niu L, Tolbert WD, Pazgier M

PDB-9og6:
Apo SARS-COV-2-6P-MUT7 S PROTEIN closed conformation
Method: single particle / : Niu L, Chandravanshi M, Tolbert WD, Pazgier M

PDB-9og7:
APO SARS-COV-2-6P-MUT7 S PROTEIN 1 RBD UP CONFORMATION
Method: single particle / : Niu L, Chandravanshi M, Tolbert WD, Pazgier M

EMDB-46758:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46759:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46760:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46761:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46762:
Cryo-EM structure of gB-Ecto.516P.531E.DS, a prefusion-stabilized HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46765:
Cryo-EM structure of gB-Ecto.516P, an HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Lawrence L, Kwong PD

EMDB-63105:
Cryo-EM structure of inhibitor E3 bound human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-39365:
Cryo-EM structure of ADGRG2-Gs complex with NTF nanobody
Method: single particle / : Huang SM, Sheng-chao G

EMDB-64606:
Anamorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Zhuang Y, Jiang Y, Xie X, Xu HE, Wang Y

EMDB-64734:
Macimorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Zhuang Y, Jiang Y, Xie X, Xu H, Wang Y

EMDB-49158:
Human TMEM63A mutant V53M lipid-open state
Method: single particle / : Zheng W, Fu TM, Holt JR

EMDB-49160:
Human TMEM63A mutant V53M closed state
Method: single particle / : Zheng W, Fu TM, Holt JR

PDB-9n93:
Human TMEM63A mutant V53M lipid-open state
Method: single particle / : Zheng W, Fu TM, Holt JR

PDB-9n95:
Human TMEM63A mutant V53M closed state
Method: single particle / : Zheng W, Fu TM, Holt JR

EMDB-44781:
CRYO-EM STRUCTURE OF CARDIAC MUSCLE ALPHA-ACTIN A331P HCM MUTANT
Method: single particle / : Huang HL, Heissler SM, Chinthalapudi K

EMDB-44777:
CRYO-EM STRUCTURE OF CARDIAC MUSCLE ALPHA-ACTIN M305L HCM MUTANT
Method: single particle / : Huang HL, Heissler SM, Chinthalapudi K

EMDB-47930:
Cryo-EM structure of the human KCa3.1/calmodulin channel in complex with Ca2+ and 1,4-dihydropyridine (DHP-103)
Method: single particle / : Nam YW, Zhang M

EMDB-44272:
Fab1-2 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44273:
Fab1-3 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44274:
Fab1-4 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44275:
Fab1-5 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44276:
Fab1-6 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44277:
Fab1-7 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44314:
Fab2-1 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

EMDB-44315:
Fab2-2 in complex with the capsid of Adeno-associated virus type 9
Method: single particle / : Mietzsch M, McKenna R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more