[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 45,962 items for (author: ha & b)

EMDB-56477:
SARM1 TIR with BEXi adduct 6
Method: single particle / : Sader KS, Oliveria TM

EMDB-56479:
SARM1 TIR with BEXi adduct 17
Method: single particle / : Sader K

PDB-9tzw:
SARM1 TIR with BEXi adduct 6
Method: single particle / : Sader KS, Oliveria TM

PDB-9tzy:
SARM1 TIR with BEXi adduct 17
Method: single particle / : Sader K

EMDB-75470:
Hna Monomer
Method: single particle / : Hooper M

PDB-10uj:
Hna Monomer
Method: single particle / : Hooper M

EMDB-55638:
Cryo-EM structure of the PseTnsAB paired-end complex (right end) in the presence of Mg
Method: single particle / : Finocchio G, Oberli S, Jinek M

EMDB-57833:
Cryo-EM structure of the PseTnsAB paired-end complex (right end) in the presence of Mn
Method: single particle / : Finocchio G, Oberli S, Jinek M

EMDB-57834:
Cryo-EM structure of the PseTnsAB paired-end complex (left end) in the presence of Mg
Method: single particle / : Finocchio G, Oberli S, Jinek M

PDB-30jv:
Cryo-EM structure of the PseTnsAB paired-end complex (right end) in the presence of Mn
Method: single particle / : Finocchio G, Oberli S, Jinek M

PDB-30jw:
Cryo-EM structure of the PseTnsAB paired-end complex (left end) in the presence of Mg
Method: single particle / : Finocchio G, Oberli S, Jinek M

PDB-9t7l:
Cryo-EM structure of the PseTnsAB paired-end complex (right end) in the presence of Mg
Method: single particle / : Finocchio G, Oberli S, Jinek M

EMDB-56126:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq7:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-54266:
WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54267:
RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54268:
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ru8:
WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ru9:
RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9rua:
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-69219:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-69220:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sp:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sq:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-65508:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65510:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0m:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0o:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-58124:
In situ subtomogram average of a ribosome bound to ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL)
Method: subtomogram averaging / : Carter SD, Jensen GJ, Freyberg Z

EMDB-71685:
Cryo-EM structure of human NXPE1
Method: single particle / : Zhang H, Li F, Piper D, Min X

EMDB-72099:
Cryo-EM structure of PPAT-NUDT5 complex bound to adenosine-5'-monophosphate (AMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-72100:
Cryo-EM structure of PPAT-NUDT5 complex bound to 6-methylthioinosine-5'-monophosphate (6-meTIMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-72101:
Cryo-EM structure of PPAT-NUDT5 complex bound to 6-benzylthioinosine-5'-monophosphate (6-benzylTIMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-70780:
CryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Carr KD, Weidle C, Alexis C, Borst AJ

EMDB-66953:
Cryo-EM structure of Streptococcus thermophilus FoeAB in complex with AMPPNP
Method: single particle / : Tanabe M, Taguchi A, Moriya T, Nishino K

EMDB-68620:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

PDB-22rj:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

EMDB-54312:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the adaptor arm)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54313:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the kinase arm)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54314:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L), focused refinement on the base of the complex
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54315:
VPS34-CII (VPS34 199-REIE-202 to 199-AAAA-202 mutant) bound to RAB5A (Q79L, focused refinement on the interface between RAB5A and VPS34)
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54316:
VPS34-CII (VPS34 199-REIE-202 > 199-AAAA-202 mutant) bound to RAB5A-GTP (Q79L), consensus refinement
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54317:
VPS34-CII (VPS34 199-REIE-202 > 199-AAAA-202 mutant) bound to RAB5A-GTP (Q79L); unsharpened composite map
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54318:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement on the kinase arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54319:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement on the adaptor arm
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54320:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, focused refinement of the RAB5A interface with VPS15
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

EMDB-54321:
VPS34-CII (VPS34 199-REIE-202 to 199-ERIR-202 mutant) bound to RAB5A (Q79L) on the VPS15 subunit, consensus refinement
Method: single particle / : Spokaite S, Ohashi Y, Bourguet M, Dessus AN, Williams RL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more