[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 425 items for (author: eren & e)

EMDB-51031:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51032:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51033:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-51038:
Cryo-electron tomogram of AL59 amyloids interacting with collagen VI
Method: electron tomography / : Sicking K, Fernandez-Busnadiego R, Ricagno S

EMDB-18973:
Cryo-EM structure of Human SHMT1
Method: single particle / : Spizzichino S, Marabelli C, Bharadwaj A, Jakobi AJ, Chaves-Sanjuan A, Giardina G, Bolognesi M, Cutruzzola F

PDB-8r7h:
Cryo-EM structure of Human SHMT1
Method: single particle / : Spizzichino S, Marabelli C, Bharadwaj A, Jakobi AJ, Chaves-Sanjuan A, Giardina G, Bolognesi M, Cutruzzola F

EMDB-18689:
Maps of Collagen VI half- and full-beads
Method: single particle / : Schulte T, Speranzini V, Chaves-Sanjuan A, Ricagno S

EMDB-41041:
Open human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t50:
Open human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-18592:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

PDB-8qqi:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

EMDB-41040:
Human HCN1 F186C S264C C309A bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t4y:
Human HCN1 F186C S264C C309A bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-41036:
Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t4m:
Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-19014:
PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Drulyte I, Hurdiss DL

EMDB-19015:
Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-19016:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 42H3 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-19017:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Drulyte I, Hurdiss DL

PDB-8r9w:
PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9x:
Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9y:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 42H3 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-8r9z:
S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments
Method: single particle / : Debski-Antoniak O, Hurdiss DL

EMDB-19426:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19427:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19428:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19429:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpy:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpz:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq0:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq2:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19886:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19887:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19888:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19889:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19890:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19891:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19892:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-19893:
Distinct life cycle stages of an ectosymbiotic DPANN archaeon
Method: electron tomography / : Gaisin VA, Wolferen M, Albers SA, Pilhofer M

EMDB-43290:
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Method: single particle / : Eren E

PDB-8vjo:
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Method: single particle / : Eren E

EMDB-19440:
Cryo-EM structure of human NTCP-Bulevirtide complex
Method: single particle / : Liu H, Zakrzewicz D, Nosol K, Irobalieva RN, Mukherjee S, Bang-Soerensen R, Goldmann N, Kunz S, Rossi L, Kossiakoff AA, Urban S, Glebe D, Geyer J, Locher KP

PDB-8rqf:
Cryo-EM structure of human NTCP-Bulevirtide complex
Method: single particle / : Liu H, Zakrzewicz D, Nosol K, Irobalieva RN, Mukherjee S, Bang-Soerensen R, Goldmann N, Kunz S, Rossi L, Kossiakoff AA, Urban S, Glebe D, Geyer J, Locher KP

EMDB-17111:
Cryo-EM structure of the wild-type alpha-synuclein fibril.
Method: helical / : Pesch V, Reithofer S, Ma L, Flores-Fernandez JM, Oezduezenciler P, Busch Y, Lien Y, Rudtke O, Frieg B, Schroeder GF, Wille H, Tamgueney G

PDB-8oqi:
Cryo-EM structure of the wild-type alpha-synuclein fibril.
Method: helical / : Pesch V, Reithofer S, Ma L, Flores-Fernandez JM, Oezduezenciler P, Busch Y, Lien Y, Rudtke O, Frieg B, Schroeder GF, Wille H, Tamgueney G

EMDB-18119:
Sulfolobus acidocaldarius AAP filament.
Method: helical / : Isupov MN, Gaines M, Daum B, McLaren M

PDB-8q30:
Sulfolobus acidocaldarius AAP filament.
Method: helical / : Isupov MN, Gaines M, Daum B, McLaren M

EMDB-19184:
Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
Method: helical / : De Simone A, Barritt JD, Chen S, Cascella R, Cecchi C, Bigi A, Jarvis JA, Chiti F, Dobson CM, Fusco G

PDB-8ri9:
Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
Method: helical / : De Simone A, Barritt JD, Chen S, Cascella R, Cecchi C, Bigi A, Jarvis JA, Chiti F, Dobson CM, Fusco G

EMDB-29659:
CryoEM structure of nuclear GAPDH under 8h Oxidative Stress
Method: single particle / : Choi WY, Wu H, Cheng YF, Manglik A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more