[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 31,965 items for (author: de & s)

EMDB-75268:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75269:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75270:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lk:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10ll:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lm:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75707:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75708:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75709:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75711:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75712:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11hz:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ia:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ib:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11id:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ie:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-73556:
the structure of ERMA complex with ATPrS and Mg++
Method: single particle / : Shi N, Jiang Y

EMDB-73630:
the structure of ERMA Mg2+ bound form
Method: single particle / : Shi N, Jiang Y

PDB-9ywq:
the structure of ERMA complex with ATPrS and Mg++
Method: single particle / : Shi N, Jiang Y

PDB-9yyd:
the structure of ERMA Mg2+ bound form
Method: single particle / : Shi N, Jiang Y

EMDB-66671:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

PDB-9x9t:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

EMDB-54981:
GABA-A a4b3d receptor in complex with GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-54987:
GABA-A a4b3d receptor in complex with DS2-Me, GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-55007:
GABA-A a4b3d receptor in complex with GABA and Nb24
Method: single particle / : Nestorow S, Miller PS

EMDB-55589:
Structure of mouse full-length LRRC8D
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

EMDB-55590:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1, Conformation 1
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

EMDB-55591:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1, Conformation 2
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

EMDB-55592:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb4
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

PDB-9t5m:
Structure of mouse full-length LRRC8D
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

PDB-9t5n:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1, Conformation 1
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

PDB-9t5o:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1, Conformation 2
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

PDB-9t5p:
Structure of heteromeric mouse LRRC8A/D Volume-Regulated Anion Channel in complex with synthetic nanobody Sb4
Method: single particle / : Lehmann EF, Deneka D, Stierli F, Rutz S, Dutzler R

EMDB-58507:
Discodermolide stabilised 14-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-58509:
Discodermolide stabilised 13-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-70400:
amyloid fibril of recombinant transforming growth factor beta induced protein FAS1-4 domain with V624M mutation
Method: helical / : Jiang YX, Sawaya MR, Eisenberg DS

EMDB-70401:
amyloid fibril of recombinant transforming growth factor beta induced protein FAS1-4 domain with V624M mutation, refined using helical spacing of peripheral globular domain
Method: single particle / : Jiang YX, Sawaya MR, Eisenberg DS

EMDB-75305:
Xenopus KCNQ1 Intermediate State (E1R/R2E) in complex with UCL2077
Method: single particle / : Kyriakis E, Eldstrom J, Van Petegem F, Fedida D

EMDB-75306:
Xenopus KCNQ1 in complex with UCL2077
Method: single particle / : Kyriakis E, Eldstrom J, Van Petegem F, Fedida D

EMDB-54817:
Dimeric form of the Streptococcus pyogenes nuclease A (SpnA)
Method: single particle / : Bennig IA, Strobaek J, Marmede R, Neumann A, Friaes A, Ramirez M, Hall M, Collin M, Malmstrom L, Ekstrom S, Frick I, Bjorck L, Happonen LJ

PDB-9sf9:
Dimeric form of the Streptococcus pyogenes nuclease A (SpnA)
Method: single particle / : Bennig IA, Strobaek J, Marmede R, Sellerberg A, Neumann A, Friaes A, Ramirez M, Hall M, Collin M, Malmstrom L, Ekstrom S, Frick I, Bjorck L, Happonen LJ

EMDB-54816:
Monomeric form of the Streptococcus pyogenes nuclease A (SpnA)
Method: single particle / : Bennig IA, Strobaek J, Marmede R, Sellerberg A, Neumann A, Friaes A, Ramirez M, Hall M, Collin M, Malmstrom L, Ekstrom S, Frick I, Bjorck L, Happonen LJ

PDB-9sf8:
Monomeric form of the Streptococcus pyogenes nuclease A (SpnA)
Method: single particle / : Bennig IA, Strobaek J, Marmede R, Sellerberg A, Neumann A, Friaes A, Ramirez M, Hall M, Collin M, Malmstrom L, Ekstrom S, Frick I, Bjorck L, Happonen LJ

EMDB-54884:
Native Neisseria meninigitidis PilQ, Gate Domain focused map
Method: single particle / : Fernandez-Martinez D, Dumenil G

EMDB-54885:
Native Neisseria meningitidis PilQ, N0-domain focused map
Method: single particle / : Fernandez-Martinez D, Dumenil G

EMDB-54886:
Neisseria meningitidis Native PilQ protomer, composite map
Method: single particle / : Fernandez-Martinez D, Dumenil G

EMDB-54887:
Neisseria meningitidis Native PilQ tetradecamer
Method: single particle / : Fernandez-Martinez D, Dumenil G

EMDB-76915:
Structure of the HPII Catalase from Escherichia coli
Method: single particle / : Iarocci J, Song M, Guo S

EMDB-56657:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

PDB-28no:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more