[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 105 items for (author: anger & am)

EMDB-45530:
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Method: single particle / : Niu L, Tolbert WD, Pazgier M

PDB-9cf5:
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Method: single particle / : Niu L, Tolbert WD, Pazgier M

EMDB-53528:
Tomogram of a PSD95-containing glutamatergic synapse from 'ultra fresh' prepared mouse.
Method: electron tomography / : Peukes J, Frank R, Briggs JAG

EMDB-54246:
Subtomogram average of an ionotropic glutamate receptor within mammalian glutamatergic synapses
Method: subtomogram averaging / : Peukes J, Frank R, Briggs JAG

EMDB-48457:
Preclinical and clinical evaluation of a novel TRPA1 antagonist LY3526318
Method: single particle / : Nie S

PDB-9moe:
Preclinical and clinical evaluation of a novel TRPA1 antagonist LY3526318
Method: single particle / : Nie S

EMDB-47002:
Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold
Method: helical / : Xu X, Angera JI, Rajewski HB, Jiang W, Del Valle RJ

PDB-9dme:
Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold
Method: helical / : Xu X, Angera JI, Rajewski HB, Jiang W, Del Valle RJ

EMDB-44133:
filament of type 1 KD-mxyl miniature tau macrocycle derived from 4R tauopathic fold
Method: helical / : Xu X, Angera JI, Rajewski HB, Jiang W, Del Valle RJ

PDB-9b3a:
filament of type 1 KD-mxyl miniature tau macrocycle derived from 4R tauopathic fold
Method: helical / : Xu X, Angera JI, Rajewski HB, Jiang W, Del Valle RJ

EMDB-43757:
Cas9d Effector:sgRNA Binary Complex
Method: single particle / : Fregoso Ocampo R, Bravo JPK, Taylor DW

EMDB-43760:
Cas9d 6bp R-loop Seed Complex
Method: single particle / : Fregoso Ocampo R, Bravo JPK, Taylor DW

EMDB-43878:
Cas9d 20bp R-loop Complex
Method: single particle / : Fregoso Ocampo R, Taylor DW, Bravo JPK

PDB-8w2s:
Cas9d Effector:sgRNA Binary Complex
Method: single particle / : Fregoso Ocampo R, Bravo JPK, Taylor DW

PDB-8w2z:
Cas9d 6bp R-loop Seed Complex
Method: single particle / : Fregoso Ocampo R, Bravo JPK, Taylor DW

PDB-9auf:
Cas9d 20bp R-loop Complex
Method: single particle / : Fregoso Ocampo R, Taylor DW, Bravo JPK

EMDB-52069:
The molecular architecture of the murine kidney slit diaphragm revealed by cryo-electron tomography
Method: subtomogram averaging / : Frangakis MP, Frangakis AS, Birtasu AN

EMDB-46646:
HIV-1 BaL Env in complex with CD4 mimetic CJF-III-288 and 17b IgG
Method: subtomogram averaging / : Grunst MW

EMDB-19653:
Structure of the E3 ubiquitin ligase RNF213, determined by cryoEM
Method: single particle / : Naydenova K, Randow F

EMDB-19654:
Human RNF213 (consensus refinement without accounting for flexibility)
Method: single particle / : Naydenova K, Randow F

EMDB-19655:
Human RNF213: focused refinement of ATPase domain
Method: single particle / : Naydenova K, Randow F

EMDB-19656:
Human RNF213: focused refinement of stalk domain
Method: single particle / : Naydenova K, Randow F

EMDB-19657:
Human RNF213: focused refinement of carbohydrate binding module (CBM) domain
Method: single particle / : Naydenova K, Randow F

EMDB-19658:
Human RNF213: focused refinement of E3 ligase domain
Method: single particle / : Naydenova K, Randow F

EMDB-19659:
Human RNF213: focused refinement of E3-RING domain
Method: single particle / : Naydenova K, Randow F

PDB-8s24:
Structure of the E3 ubiquitin ligase RNF213, determined by cryoEM
Method: single particle / : Naydenova K, Randow F

EMDB-18036:
In situ structure of E. coli 70S ribosome
Method: subtomogram averaging / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18037:
In situ 70S ribosome of E. coli K-12 untreated cells
Method: subtomogram averaging / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18038:
In situ 70S ribosome of E. coli K-12 cells treated with tetracycline
Method: subtomogram averaging / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18039:
In situ 70S ribosome of E. coli ED1a untreated cells
Method: subtomogram averaging / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18040:
In situ 70S ribosome of E. coli ED1a cells treated with tetracycline
Method: subtomogram averaging / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18041:
E. coli K-12 70S ribosome bound to mRNA A-tRNA, P-tRNA, E-tRNA
Method: single particle / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-18042:
E. coli ED1a 70S ribosome bound to mRNA A-tRNA, P-tRNA, E-tRNA
Method: single particle / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-19206:
E. coli ED1a 70S-tetracycline complex - focused refinement on 30S head
Method: single particle / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-19207:
E. coli ED1a 70S-tetracycline complex - focused refinement on 30S body
Method: single particle / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-19208:
E. coli ED1a 70S-tetracycline complex - focused refinement on 50S
Method: single particle / : Khusainov I, Romanov N, Goemans C, Turonova B, Zimmerli CE, Welsch S, Langer JD, Typas A, Beck M

EMDB-19042:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19043:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (13pf) protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19044:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (14pf) protofilament
Method: single particle / : Bangera M, Moores CA

PDB-8rc1:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-17645:
Structure of a heteropolymeric type 4 pilus from a monoderm bacterium
Method: single particle / : Anger R, Pieulle L, Shahin M, Valette O, Le Guenno H, Kosta A, Pelicic V, Fronzes R

PDB-8pfb:
Structure of a heteropolymeric type 4 pilus from a monoderm bacterium
Method: single particle / : Anger R, Pieulle L, Shahin M, Valette O, Le Guenno H, Kosta A, Pelicic V, Fronzes R

EMDB-14863:
Bacteriophage T5 head - pb10-N-Ter fused to OVA
Method: single particle / : Schoehn G, Boulanger P, Benihoud K

EMDB-34836:
Complex of GMPCPP microtubule, FAP20 and tubulin (in absence of GTP)
Method: single particle / : Bangera M, Sirajuddin M

EMDB-32033:
14pf microtubule decorated with EML1-GFP
Method: helical / : Bangera M, Sirajuddin M

EMDB-12335:
Structure of PSII-M
Method: single particle / : Zabret J, Bohn S

EMDB-12336:
Structure of PSII-I (PSII with Psb27, Psb28, and Psb34)
Method: single particle / : Zabret J, Bohn S

EMDB-12337:
Structure of PSII-I prime (PSII with Psb28, and Psb34)
Method: single particle / : Zabret J, Bohn S

PDB-7nho:
Structure of PSII-M
Method: single particle / : Zabret J, Bohn S, Schuller SK, Arnolds O, Chan A, Tajkhorshid E, Stoll R, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

PDB-7nhp:
Structure of PSII-I (PSII with Psb27, Psb28, and Psb34)
Method: single particle / : Zabret J, Bohn S, Schuller SK, Arnolds O, Chan A, Tajkhorshid E, Stoll R, Engel BD, Rudack T, Schuller JM, Nowaczyk MM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more