Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8Y7E
DownloadVisualize
BU of 8y7e by Molmil
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U12 snRNP part
Descriptor: PHD finger-like domain-containing protein 5A, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ...
Authors:Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
Deposit date:2024-02-04
Release date:2024-03-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.66 Å)
Cite:Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
8Y6O
DownloadVisualize
BU of 8y6o by Molmil
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, Centrosomal AT-AC splicing factor, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
Deposit date:2024-02-02
Release date:2024-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
8RVE
DownloadVisualize
BU of 8rve by Molmil
Vimentin intermediate filament
Descriptor: Vimentin
Authors:Eibauer, M, Medalia, O.
Deposit date:2024-02-01
Release date:2024-04-10
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Vimentin filaments integrate low-complexity domains in a complex helical structure.
Nat.Struct.Mol.Biol., 2024
8RU2
DownloadVisualize
BU of 8ru2 by Molmil
Structure of the F-actin barbed end bound by formin mDia1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
Authors:Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
Deposit date:2024-01-29
Release date:2024-04-10
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024
8RTY
DownloadVisualize
BU of 8rty by Molmil
Structure of the F-actin barbed end bound by Cdc12 and profilin (ring complex) at a resolution of 6.3 Angstrom
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
Authors:Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
Deposit date:2024-01-29
Release date:2024-04-10
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (6.25 Å)
Cite:Molecular mechanism of actin filament elongation by formins.
Science, 384, 2024
8RTT
DownloadVisualize
BU of 8rtt by Molmil
Structure of the formin Cdc12 bound to the barbed end of phalloidin-stabilized F-actin.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
Authors:Oosterheert, W, Boiero Sanders, M, Funk, J, Prumbaum, D, Raunser, S, Bieling, P.
Deposit date:2024-01-29
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Mechanism of formin-mediated processive elongation of actin filaments revealed by cryo-EM
To Be Published
8VT7
DownloadVisualize
BU of 8vt7 by Molmil
Structure of the gamma tubulin ring complex nucleated microtubule protofilament.
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Aher, A, Urnavicius, L, Kapoor, T.M.
Deposit date:2024-01-25
Release date:2024-03-27
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8VS9
DownloadVisualize
BU of 8vs9 by Molmil
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Teran, D, Zhang, Y, Korostelev, A.A.
Deposit date:2024-01-23
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
Front Microbiol, 15, 2024
8VSA
DownloadVisualize
BU of 8vsa by Molmil
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Teran, D, Zhang, Y, Korostelev, A.A.
Deposit date:2024-01-23
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
Front Microbiol, 15, 2024
8Y0W
DownloadVisualize
BU of 8y0w by Molmil
dormant ribosome with eIF5A, eEF2 and SERBP1
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Du, M, Zeng, F.
Deposit date:2024-01-23
Release date:2024-02-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:dormant ribosome with eIF5A, eEF2 and SERBP1
To Be Published
8Y0U
DownloadVisualize
BU of 8y0u by Molmil
dormant ribosome with STM1
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S1-A, ...
Authors:Du, M, Zeng, F.
Deposit date:2024-01-23
Release date:2024-02-07
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:dormant ribosome with STM1
To Be Published
8Y0X
DownloadVisualize
BU of 8y0x by Molmil
Dormant ribosome with SERBP1
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Du, M, Zeng, F.
Deposit date:2024-01-23
Release date:2024-02-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The global structure of dormant ribosome
To Be Published
8RRR
DownloadVisualize
BU of 8rrr by Molmil
Alpha-synuclein amyloid fibril
Descriptor: Alpha-synuclein
Authors:Saibil, H.R, Monistrol, J.
Deposit date:2024-01-23
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Stepwise recruitment of Hsc70 by DNAJB1 produces ordered arrays primed for bursts of amyloid fibre disassembly
Biorxiv, 2024
8VRJ
DownloadVisualize
BU of 8vrj by Molmil
Rigid body fitted model for gamma tubulin ring complex capped microtubule
Descriptor: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
Authors:Aher, A, Urnavicius, L, Kapoor, T.M.
Deposit date:2024-01-22
Release date:2024-03-27
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8VRK
DownloadVisualize
BU of 8vrk by Molmil
Rigid body fitted model for refined density map of gamma tubulin ring complex capped microtubule
Descriptor: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
Authors:Aher, A, Urnavicius, L, Kapoor, T.M.
Deposit date:2024-01-22
Release date:2024-03-27
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8VRD
DownloadVisualize
BU of 8vrd by Molmil
Rigid body fitted model for free recombinant gamma tubulin ring complex.
Descriptor: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
Authors:Aher, A, Urnavicius, L, Kapoor, T.M.
Deposit date:2024-01-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Rigid body fitted model for free recombinant gamma tubulin ring complex.
To be published
8XXM
DownloadVisualize
BU of 8xxm by Molmil
Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3G
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 2024
8XXN
DownloadVisualize
BU of 8xxn by Molmil
Cryo-EM structure of the human 43S ribosome with PDCD4
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J.
Deposit date:2024-01-18
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.
Cell Res., 2024
8RQM
DownloadVisualize
BU of 8rqm by Molmil
Alpha-synuclein amyloid fibrils
Descriptor: Alpha-synuclein
Authors:Saibil, H.R, Monistrol, J.
Deposit date:2024-01-18
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Stepwise recruitment of Hsc70 by DNAJB1 produces ordered arrays primed for bursts of amyloid fibre disassembly
Biorxiv, 2024
8RPY
DownloadVisualize
BU of 8rpy by Molmil
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, Apidaecins type 137, ...
Authors:Lauer, S, Nikolay, R, Spahn, C.
Deposit date:2024-01-17
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
Nat Commun, 15, 2024
8RPZ
DownloadVisualize
BU of 8rpz by Molmil
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, Apidaecins type 88, ...
Authors:Lauer, S, Nikolay, R, Spahn, C.
Deposit date:2024-01-17
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
Nat Commun, 15, 2024
8RQ0
DownloadVisualize
BU of 8rq0 by Molmil
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, Apidaecins type 88, ...
Authors:Lauer, S, Nikolay, R, Spahn, C.
Deposit date:2024-01-17
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
Nat Commun, 15, 2024
8RQ2
DownloadVisualize
BU of 8rq2 by Molmil
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, Apidaecins type 88, ...
Authors:Lauer, S, Nikolay, R, Spahn, C.
Deposit date:2024-01-17
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
Nat Commun, 15, 2024
8VQ4
DownloadVisualize
BU of 8vq4 by Molmil
CDK2-CyclinE1 in complex with allosteric inhibitor I-125A.
Descriptor: (8R)-6-(1-benzyl-1H-pyrazole-4-carbonyl)-N-[(2S,3R)-3-(2-cyclohexylethoxy)-1-(methylamino)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
Authors:Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
Deposit date:2024-01-17
Release date:2024-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Expanding the ligandable proteome by paralog hopping with covalent probes.
Biorxiv, 2024
8VQ3
DownloadVisualize
BU of 8vq3 by Molmil
CDK2-CyclinE1 in complex with allosteric inhibitor I-198.
Descriptor: (8R)-N-[(2S,3R)-3-(cyclohexylmethoxy)-1-(morpholin-4-yl)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-6-(1,3-thiazole-5-carbonyl)-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
Authors:Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
Deposit date:2024-01-17
Release date:2024-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Expanding the ligandable proteome by paralog hopping with covalent probes.
Biorxiv, 2024

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon