Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BP2
DownloadVisualize
BU of 7bp2 by Molmil
Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: GLYCEROL, Histone H2A.6, Histone H2B.1, ...
Authors:Luo, Q, Baihui, W.
Deposit date:2020-03-21
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
7C0M
DownloadVisualize
BU of 7c0m by Molmil
Human cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (145-MER), Histone H2A type 1-B/E, ...
Authors:Kujirai, T, Zierhut, C, Takizawa, Y, Kim, R, Negishi, L, Uruma, N, Hirai, S, Funabiki, H, Kurumizaka, H.
Deposit date:2020-05-01
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for the inhibition of cGAS by nucleosomes.
Science, 370, 2020
7BP5
DownloadVisualize
BU of 7bp5 by Molmil
Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: ASN-ASP-PRO-ASP-TYR, GLYCEROL, Histone H2A.6, ...
Authors:Luo, Q, Baihui, W.
Deposit date:2020-03-21
Release date:2020-11-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
6FQ5
DownloadVisualize
BU of 6fq5 by Molmil
Class 1 : canonical nucleosome
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Bilokapic, S, Halic, M.
Deposit date:2018-02-13
Release date:2018-04-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural rearrangements of the histone octamer translocate DNA.
Nat Commun, 9, 2018
7BY0
DownloadVisualize
BU of 7by0 by Molmil
The cryo-EM structure of CENP-A nucleosome in complex with the phosphorylated CENP-C
Descriptor: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Ariyoshi, M, Makino, F, Fukagawa, T.
Deposit date:2020-04-21
Release date:2021-02-10
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of the CENP-A nucleosome in complex with phosphorylated CENP-C.
Embo J., 40, 2021
7BXT
DownloadVisualize
BU of 7bxt by Molmil
The cryo-EM structure of CENP-A nucleosome in complex with CENP-C peptide and CENP-N N-terminal domain
Descriptor: CENP-C, DNA (145-mer), Histone H2A type 1-B/E, ...
Authors:Ariyoshi, M, Makino, F, Fukagawa, T.
Deposit date:2020-04-20
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of the CENP-A nucleosome in complex with phosphorylated CENP-C.
Embo J., 40, 2021
7MBN
DownloadVisualize
BU of 7mbn by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode02
Descriptor: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
7MBM
DownloadVisualize
BU of 7mbm by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
6FQ6
DownloadVisualize
BU of 6fq6 by Molmil
Class 2 : distorted nucleosome
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Bilokapic, S, Halic, M.
Deposit date:2018-02-13
Release date:2018-04-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural rearrangements of the histone octamer translocate DNA.
Nat Commun, 9, 2018
7A08
DownloadVisualize
BU of 7a08 by Molmil
CryoEM Structure of cGAS Nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, Histone H2A type 1-C, Histone H2B type 1-C/E/F/G/I, ...
Authors:Michalski, S, de Oliveira Mann, C.C, Witte, G, Bartho, J, Lammens, K, Hopfner, K.P.
Deposit date:2020-08-07
Release date:2020-09-23
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis for sequestration and autoinhibition of cGAS by chromatin.
Nature, 587, 2020
7ON1
DownloadVisualize
BU of 7on1 by Molmil
Cenp-A nucleosome in complex with Cenp-C
Descriptor: BJ4_G0006610.mRNA.1.CDS.1, BJ4_G0007000.mRNA.1.CDS.1, DNA (123-MER), ...
Authors:Yan, K, Yang, J, Zhang, Z, Barford, D.
Deposit date:2021-05-25
Release date:2021-07-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cenp-A nucleosome in complex with Cenp-C
To Be Published
7OHA
DownloadVisualize
BU of 7oha by Molmil
nucleosome with TBP and TFIIA bound at SHL +2
Descriptor: DNA (122-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Wang, H, Cramer, P.
Deposit date:2021-05-09
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OH9
DownloadVisualize
BU of 7oh9 by Molmil
Nucleosome with TBP and TFIIA bound at SHL -6
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Wang, H, Cramer, P.
Deposit date:2021-05-09
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHB
DownloadVisualize
BU of 7ohb by Molmil
TBP-nucleosome complex
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Wang, H, Cramer, P.
Deposit date:2021-05-10
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHC
DownloadVisualize
BU of 7ohc by Molmil
Cryo-EM structure of nucleosome core particle composed of the Widom 601 DNA sequence
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Wang, H, Cramer, P.
Deposit date:2021-05-10
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
6FTX
DownloadVisualize
BU of 6ftx by Molmil
Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromatin-remodeling ATPase, ...
Authors:Sundaramoorthy, R, Owen-hughes, T, Norman, D.G, Hughes, A.
Deposit date:2018-02-25
Release date:2018-08-08
Last modified:2018-10-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome.
Elife, 7, 2018
7BWD
DownloadVisualize
BU of 7bwd by Molmil
Structure of Dot1L-H2BK34ub Nucleosome Complex
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Lou, Z.Y, Liu, L, Cao, L, Ai, H.S, Sun, Z.X.
Deposit date:2020-04-14
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Structure of the Dot1L-H2BK34ub Nucleosome Complex Reveals an Unprecedented Crosstalk Activation Mechanism through Nucleosome Shape Distortion
To Be Published
7OTQ
DownloadVisualize
BU of 7otq by Molmil
Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome
Descriptor: Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ...
Authors:Bacic, L, Gaullier, G, Deindl, S.
Deposit date:2021-06-10
Release date:2021-09-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome
Elife, 10, 2021
6FQ8
DownloadVisualize
BU of 6fq8 by Molmil
Class 3 : translocated nucleosome
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Bilokapic, S, Halic, M.
Deposit date:2018-02-13
Release date:2018-04-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural rearrangements of the histone octamer translocate DNA.
Nat Commun, 9, 2018
6G0L
DownloadVisualize
BU of 6g0l by Molmil
Structure of two molecules of the chromatin remodelling enzyme Chd1 bound to a nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ...
Authors:Sundaramoorthy, R, Owen-hughes, T, Norman, D.G, Hughes, A.
Deposit date:2018-03-19
Release date:2018-08-22
Last modified:2018-11-21
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome.
Elife, 7, 2018
6WZ5
DownloadVisualize
BU of 6wz5 by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA (153-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-13
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6X0N
DownloadVisualize
BU of 6x0n by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-16
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6X59
DownloadVisualize
BU of 6x59 by Molmil
The mouse cGAS catalytic domain binding to human assembled nucleosome
Descriptor: Cyclic GMP-AMP synthase, DNA, Histone H2A type 1, ...
Authors:Pengbiao, X, Pingwei, L, Baoyu, Z.
Deposit date:2020-05-25
Release date:2020-09-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:The molecular basis of tight nuclear tethering and inactivation of cGAS.
Nature, 587, 2020
6XWT
DownloadVisualize
BU of 6xwt by Molmil
drosophila melanogaster CENP-A/H4 bound to N-terminal CAL1 fragment
Descriptor: Chromosome alignment defect 1, Histone H3-like centromeric protein cid, Histone H4
Authors:Jeyaprakash, A.A, Medina-Pritchard, B, Lazou, V, Zou, J, Byron, O, Abad, M.A, Rappsilber, J, Heun, P.
Deposit date:2020-01-24
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1.
Embo J., 39, 2020
6Y36
DownloadVisualize
BU of 6y36 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cccA DNA
Descriptor: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon