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5TB3
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BU of 5tb3 by Molmil
Structure of rabbit RyR1 (EGTA-only dataset, class 3)
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ZINC ION
Authors:Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
Deposit date:2016-09-11
Release date:2016-10-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
2WSF
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BU of 2wsf by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-05
Release date:2009-11-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structure determination and improved model of plant photosystem I.
J. Biol. Chem., 285, 2010
2X53
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BU of 2x53 by Molmil
Structure of the phage p2 baseplate in its activated conformation with Sr
Descriptor: ORF15, ORF16, PUTATIVE RECEPTOR BINDING PROTEIN, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2010-02-05
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
3CXW
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BU of 3cxw by Molmil
Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand I
Descriptor: (4R)-7,8-dichloro-1',9-dimethyl-1-oxo-1,2,4,9-tetrahydrospiro[beta-carboline-3,4'-piperidine]-4-carbonitrile, CHLORIDE ION, Pimtide peptide, ...
Authors:Filippakopoulos, P, Bullock, A, Fedorov, O, Huber, K, Bracher, F, Pike, A.C.W, Roos, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2008-04-25
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:7,8-Dichloro-1-oxo-beta-carbolines as a Versatile Scaffold for the Development of Potent and Selective Kinase Inhibitors with Unusual Binding Modes
J.Med.Chem., 55, 2012
5CIO
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BU of 5cio by Molmil
Crystal structure of PqqF
Descriptor: ZINC ION, pyrroloquinoline quinone biosynthesis protein PqqF
Authors:Wei, Q, Xu, D, Ran, T, Wang, W.
Deposit date:2015-07-13
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Function of PqqF Protein in the Pyrroloquinoline Quinone Biosynthetic Pathway
J.Biol.Chem., 291, 2016
4XR5
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BU of 4xr5 by Molmil
X-ray structure of the unliganded thymidine phosphorylase from Salmonella typhimurium at 2.05 A resolution
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
Authors:Balaev, V.V, Lashkov, A.A, Gabdulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2015-01-20
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural investigation of the thymidine phosphorylase from Salmonella typhimurium in the unliganded state and its complexes with thymidine and uridine.
Acta Crystallogr.,Sect.F, 72, 2016
4GF0
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BU of 4gf0 by Molmil
Crystal structure of glutahtione transferase homolog from sulfitobacter, TARGET EFI-501084, with bound glutathione
Descriptor: CHLORIDE ION, GLUTATHIONE, Glutathione S-transferase
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-02
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of glutahtione transferase homolog from sulfitobacter, TARGET EFI-501084, with bound glutathione
To be Published
5TIQ
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BU of 5tiq by Molmil
The Structure of the Major Capsid protein of PBCV-1
Descriptor: 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose, MERCURY (II) ION, Major capsid protein, ...
Authors:Klose, T, De Castro, C, Speciale, I, Molinaro, A, Van Etten, J.L, Rossmann, M.G.
Deposit date:2016-10-03
Release date:2017-10-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.537 Å)
Cite:Structure of the chlorovirus PBCV-1 major capsid glycoprotein determined by combining crystallographic and carbohydrate molecular modeling approaches.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3BYW
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BU of 3byw by Molmil
Crystal structure of an extracellular domain of arabinofuranosyltransferase from Corynebacterium diphtheriae
Descriptor: ACETATE ION, Putative arabinofuranosyltransferase, ZINC ION
Authors:Tan, K, Hatzos, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-01-16
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of an extracellular domain of arabinofuranosyltransferase from Corynebacterium diphtheriae.
To be Published
3C78
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BU of 3c78 by Molmil
0.98 A crystal structure of nitrophorin 4 from Rhodnius prolixus containing FE(III) 2,4 dimethyl deuteroporphyrin ix complexed with ammonia at ph 7.5
Descriptor: AMMONIA, FE(III) 2,4-DIMETHYL DEUTEROPORPHYRIN IX, Nitrophorin-4
Authors:Amoia, A.M, Montfort, W.R.
Deposit date:2008-02-06
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Heme Distortion in Nitrophorin 4: High Resolution Structures of Mutated Positions L123V and L133V and Heme Altered Proteins
To be Published
5TRX
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BU of 5trx by Molmil
Room temperature structure of an extradiol ring-cleaving dioxygenase from B.fuscum determined using serial femtosecond crystallography
Descriptor: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
Authors:Kovaleva, E.G, Oberthuer, D, Tolstikova, A, Mariani, V.
Deposit date:2016-10-27
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Double-flow focused liquid injector for efficient serial femtosecond crystallography
Sci. Rep., 7, 2017
4GB3
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BU of 4gb3 by Molmil
Human coxsackievirus B3 strain RD coat protein
Descriptor: MYRISTIC ACID, PALMITIC ACID, coat protein 1, ...
Authors:Yoder, J.D, Hafenstein, S.
Deposit date:2012-07-26
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The Crystal Structure of a Coxsackievirus B3-RD Variant and a Refined 9-Angstrom Cryo-Electron Microscopy Reconstruction of the Virus Complexed with Decay-Accelerating Factor (DAF) Provide a New Footprint of DAF on the Virus Surface.
J.Virol., 86, 2012
3C60
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BU of 3c60 by Molmil
Crystal structure of mouse MHC class II I-Ab/3K peptide complexed with mouse TCR YAe62
Descriptor: 3K peptide, Linker, and H-2 class II histocompatibility antigen (A beta chain), ...
Authors:Dai, S.
Deposit date:2008-02-01
Release date:2008-04-29
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crossreactive T Cells spotlight the germline rules for alphabeta T cell-receptor interactions with MHC molecules.
Immunity, 28, 2008
3CAU
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BU of 3cau by Molmil
D7 symmetrized structure of unliganded GroEL at 4.2 Angstrom resolution by cryoEM
Descriptor: 60 kDa chaperonin
Authors:Ludtke, S.J, Baker, M.L, Chen, D.H, Song, J.L, Chuang, D, Chiu, W.
Deposit date:2008-02-20
Release date:2008-09-02
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:De Novo Backbone Trace of GroEL from Single Particle Electron Cryomicroscopy.
Structure, 16, 2008
3CCD
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BU of 3ccd by Molmil
1.0 A Structure of Post-Succinimide His15Asp HPr
Descriptor: Phosphocarrier protein HPr, SULFATE ION
Authors:Napper, S, Prasad, L, Delbaere, L.T.J.
Deposit date:2008-02-25
Release date:2008-10-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural investigation of a phosphorylation-catalyzed, isoaspartate-free, protein succinimide: crystallographic structure of post-succinimide His15Asp histidine-containing protein
Biochemistry, 47, 2008
3CCU
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BU of 3ccu by Molmil
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Gurel, G.
Deposit date:2008-02-26
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
5C0T
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BU of 5c0t by Molmil
Crystal structure of the mercury-bound form of MerB mutant D99S
Descriptor: Alkylmercury lyase, BROMIDE ION, MERCURY (II) ION
Authors:Wahba, H.M, Lecoq, L, Stevenson, M, Mansour, A, Cappadocia, L, Lafrance-Vanasse, J, Wilkinson, K.J, Sygusch, J, Wilcox, D.E, Omichinski, J.G.
Deposit date:2015-06-12
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity.
Biochemistry, 55, 2016
4ISW
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BU of 4isw by Molmil
Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
Authors:Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
Deposit date:2013-01-17
Release date:2013-12-11
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Crystal structure of phosphoramide-phosphorylated thymidylate synthase reveals pSer127, reflecting probably pHis to pSer phosphotransfer.
Bioorg.Chem., 52C, 2013
5CGF
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BU of 5cgf by Molmil
Yeast 20S proteasome beta5-G48C mutant
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Dubiella, C, Groll, M.
Deposit date:2015-07-09
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Selective Inhibition of the Immunoproteasome by Structure-Based Targeting of a Non-catalytic Cysteine.
Angew.Chem.Int.Ed.Engl., 54, 2015
3CCL
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BU of 3ccl by Molmil
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Gurel, G.
Deposit date:2008-02-26
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
5C2N
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BU of 5c2n by Molmil
The de novo evolutionary emergence of a symmetrical protein is shaped by folding constraints
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta propeller
Authors:Smock, R.G, Yadid, I, Dym, O, Clarke, J, Tawfik, D.S.
Deposit date:2015-06-16
Release date:2016-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:De Novo Evolutionary Emergence of a Symmetrical Protein Is Shaped by Folding Constraints.
Cell, 164, 2016
4J3Z
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BU of 4j3z by Molmil
Crystal structure of mandelate racemase/muconate lactonizing enzyme from Jannaschia sp. CCS1
Descriptor: Mandelate racemase/muconate lactonizing enzyme
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Zenchek, W, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-02-06
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of mandelate racemase/muconate lactonizing enzyme from Jannaschia sp. CCS1
To be Published
4IYD
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BU of 4iyd by Molmil
Insulin glargine crystal structure 1
Descriptor: Insulin A chain, Insulin B chain
Authors:Barba de la Rosa, A.P, Lara-Gonzalez, S, Montero-Moran, G.M, Escobedo-Moratilla, A.
Deposit date:2013-01-28
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Physicochemical and structural analysis of a biosimilar insulin glargine formulation and its reference
to be published
5C0W
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BU of 5c0w by Molmil
Structure of a 12-subunit nuclear exosome complex bound to single-stranded RNA substrates
Descriptor: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ...
Authors:Makino, D.L, Conti, E.
Deposit date:2015-06-12
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:RNA degradation paths in a 12-subunit nuclear exosome complex.
Nature, 524, 2015
3BBX
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BU of 3bbx by Molmil
The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Jiang, L, Abrahams, J.P.
Deposit date:2007-11-11
Release date:2008-10-21
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15.
J.Mol.Biol., 386, 2009

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