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2N4F	EC-NMR Structure of Arabidopsis thaliana At2g32350 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target AR3433A Descriptor: uncharacterized protein AR3433A Authors: Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2015-06-17 Release date: 2015-07-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Protein structure determination by combining sparse NMR data with evolutionary couplings. Nat.Methods, 12, 2015
5A5B	Structure of the 26S proteasome-Ubp6 complex Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ... Authors: Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F. Deposit date: 2015-06-17 Release date: 2015-07-22 Last modified: 2017-08-30 Method: ELECTRON MICROSCOPY (9.5 Å) Cite: Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome. Proc.Natl.Acad.Sci.USA, 112, 2015
3JAM	CryoEM structure of 40S-eIF1A-eIF1 complex from yeast Descriptor: 18S rRNA, MAGNESIUM ION, RACK1, ... Authors: Llacer, J.L, Hussain, T, Ramakrishnan, V. Deposit date: 2015-06-17 Release date: 2015-08-12 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.46 Å) Cite: Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex. Mol.Cell, 59, 2015
5C1Z	Parkin (UblR0RBR) Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ... Authors: kumar, A, Aguirre, J.D, Condos, T.E.C, Martinez-Torres, R.J, Chaugule, V.K, Toth, R, Sundaramoorthy, R, Mercier, P, Knebel, A, Spratt, D.E, Barber, K.R, Shaw, G.S, Walden, H. Deposit date: 2015-06-15 Release date: 2015-07-29 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis. Embo J., 34, 2015
5C23	Parkin (S65DUblR0RBR) Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ... Authors: Kumar, A, Aguirre, J.D, Condos, T.E.C, Martinez-Torres, R.J, Chaugule, V.K, Toth, R, Sundaramoorthy, R, Mercier, P, Knebel, A, Spratt, D.E, Barber, K.R, Shaw, G.S, Walden, H. Deposit date: 2015-06-15 Release date: 2015-07-29 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.37 Å) Cite: Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis. Embo J., 34, 2015
5BZ0	Crystal structure of IBV papain-like protease PLpro C101S mutant in complex with ubiquitin Descriptor: Replicase polyprotein 1ab, Ubiquitin-40S ribosomal protein S27a, ZINC ION Authors: Kong, L.Y, Yan, L.M, Zhang, Y, Rao, Z.H. Deposit date: 2015-06-11 Release date: 2016-06-15 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of IBV papain-like protease PLpro C101S mutant in complex with ubiquitin To Be Published
2N3W	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 Authors: Chen, X, Walters, K.J. Deposit date: 2015-06-10 Release date: 2016-02-24 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2N3U	Solution structure of the Rpn1 T1 site engaging two monoubiquitin molecules Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 Authors: Chen, X, Walters, K.J. Deposit date: 2015-06-10 Release date: 2016-02-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2N3V	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 Authors: Chen, X, Walters, K.J. Deposit date: 2015-06-10 Release date: 2016-02-24 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
3JAH	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.45 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
3JAI	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
3JAG	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
5BO4	Structure of SOCS2:Elongin C:Elongin B from DMSO-treated crystals Descriptor: Suppressor of cytokine signaling 2, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2 Authors: Gadd, M.S, Bulatov, E, Ciulli, A. Deposit date: 2015-05-27 Release date: 2015-07-08 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Serendipitous SAD Solution for DMSO-Soaked SOCS2-ElonginC-ElonginB Crystals Using Covalently Incorporated Dimethylarsenic: Insights into Substrate Receptor Conformational Flexibility in Cullin RING Ligases. Plos One, 10, 2015
5BNB	Crystal structure of a Ube2S-ubiquitin conjugate Descriptor: Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 S Authors: Lorenz, S.G, Feiler, C.G, Kuriyan, J. Deposit date: 2015-05-25 Release date: 2016-02-17 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Crystal Structure of a Ube2S-Ubiquitin Conjugate. Plos One, 11, 2016
4ZYN	Crystal Structure of Parkin E3 ubiquitin ligase (linker deletion; delta 86-130) Descriptor: E3 ubiquitin-protein ligase parkin, SULFATE ION, ZINC ION Authors: Lilov, A, Sauve, V, Trempe, J.F, Rodionov, D, Wang, J, Gehring, K. Deposit date: 2015-05-21 Release date: 2015-08-19 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.54 Å) Cite: A Ubl/ubiquitin switch in the activation of Parkin. Embo J., 34, 2015
4ZUX	SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ... Authors: Morgan, M, Wolberger, C. Deposit date: 2015-05-17 Release date: 2016-02-24 Last modified: 2016-03-09 Method: X-RAY DIFFRACTION (3.82 Å) Cite: Structural basis for histone H2B deubiquitination by the SAGA DUB module. Science, 351, 2016
4ZQS	New compact conformation of linear Ub2 structure Descriptor: ubiquitin Authors: Thach, T.T, Shin, D, Han, S, Lee, S. Deposit date: 2015-05-11 Release date: 2016-04-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.804 Å) Cite: New conformations of linear polyubiquitin chains from crystallographic and solution-scattering studies expand the conformational space of polyubiquitin. Acta Crystallogr D Struct Biol, 72, 2016
2N2K	Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand Descriptor: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin Authors: Liu, Z, Gong, Z, Tang, C. Deposit date: 2015-05-10 Release date: 2015-07-08 Last modified: 2015-09-23 Method: SOLUTION NMR Cite: Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition. Elife, 4, 2015
4ZPZ	Crystal Structure of Semi-synthetic Ubiquitin with Phospho-Ser65 and Ala46Cys Descriptor: Polyubiquitin-B Authors: Han, C, Virdee, S. Deposit date: 2015-05-08 Release date: 2015-06-10 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.54 Å) Cite: A Versatile Strategy for the Semisynthetic Production of Ser65 Phosphorylated Ubiquitin and Its Biochemical and Structural Characterisation. Chembiochem, 16, 2015
4ZFR	Catalytic domain of Sst2 F403A mutant bound to ubiquitin Descriptor: 1,2-ETHANEDIOL, AMSH-like protease sst2, ZINC ION, ... Authors: Shrestha, R.K. Deposit date: 2015-04-21 Release date: 2015-10-14 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.72 Å) Cite: Structure of Catalytic domain of Sst2 F403A mutant bound to ubiquitin at 1.7 Angstroms To Be Published
4ZFT	Catalytic domain of Sst2 F403W mutant bound to ubiquitin Descriptor: 1,2-ETHANEDIOL, AMSH-like protease sst2, Polyubiquitin-B, ... Authors: Bueno, A.N. Deposit date: 2015-04-21 Release date: 2015-10-14 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.304 Å) Cite: Structure of the catalytic domain of Sst2 mutant F403W bound to ubiquitin at 2.3 Angstroms To Be Published
4Z9S	Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin Descriptor: MALONIC ACID, THIOCYANATE ION, Ubiquitin-40S ribosomal protein S27a Authors: Levin-Kravets, O, Prag, G. Deposit date: 2015-04-11 Release date: 2015-07-29 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Tetrameric Assembly of Monoubiquitin Accurately Mimics the Lys11 Polyubiquitin Chain Structure. Biochemistry, 54, 2015
4UG0	STRUCTURE OF THE HUMAN 80S RIBOSOME Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S RIBOSOMAL PROTEIN, ... Authors: Khatter, H, Myasnikov, A.G, Natchiar, S.K, Klaholz, B.P. Deposit date: 2015-03-20 Release date: 2015-06-10 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of the human 80S ribosome NATURE, 520, 2015
2N13	Complex structure of MyUb (1080-1122) of human Myosin VI with K63-diUb Descriptor: Ubiquitin, Unconventional myosin-VI Authors: He, F, Walters, K. Deposit date: 2015-03-20 Release date: 2016-03-09 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains. Cell Rep, 14, 2016
5AJ0	Cryo electron microscopy of actively translating human polysomes (POST state). Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Behrmann, E, Loerke, J, Budkevich, T.V, Yamamoto, K, Schmidt, A, Penczek, P.A, Vos, M.R, Burger, J, Mielke, T, Scheerer, P, Spahn, C.M.T. Deposit date: 2015-02-19 Release date: 2015-05-20 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural Snapshots of Actively Translating Human Ribosomes Cell(Cambridge,Mass.), 161, 2015

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