SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome

Summary for 4ZUX

DescriptorHistone H3.2, Histone H4, Histone H2A type 1, ... (12 entities in total)
Functional Keywordsdub, deubiquitinase, usp, chromatin, eraser, nucleosome, modified histone, macromolecular complex, hydrolase-dna complex, hydrolase/dna
Biological sourceXenopus laevis (African clawed frog)
Cellular locationNucleus P84233 P62799 P06897 P02281 P50102 A6ZWK1 P53165
Nucleus, nucleoplasm Q6WNK7
Ubiquitin: Cytoplasm  P0CG47
Total number of polymer chains40
Total molecular weight784450.18
Morgan, M.,Wolberger, C. (deposition date: 2015-05-17, release date: 2016-02-24, Last modification date: 2016-03-09)
Primary citation
Morgan, M.T.,Haj-Yahya, M.,Ringel, A.E.,Bandi, P.,Brik, A.,Wolberger, C.
Structural basis for histone H2B deubiquitination by the SAGA DUB module.
Science, 351:725-728, 2016
PubMed: 26912860 (PDB entries with the same primary citation)
DOI: 10.1126/science.aac5681
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.260110.8%4.3%1.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution