6YVA
 
 | | PLpro-C111S with mISG15 | | Descriptor: | Replicase polyprotein 1a, Ubiquitin-like protein ISG15, ZINC ION | | Authors: | Shin, D, Dikic, I. | | Deposit date: | 2020-04-28 | | Release date: | 2020-05-13 | | Last modified: | 2024-01-24 | | Method: | X-RAY DIFFRACTION (3.18 Å) | | Cite: | Papain-like protease regulates SARS-CoV-2 viral spread and innate immunity.
Nature, 587, 2020
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6YK8
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8GOK
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1ECY
 | | PROTEASE INHIBITOR ECOTIN | | Descriptor: | ECOTIN, alpha-D-glucopyranose, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, ... | | Authors: | Shin, D.H, Suh, S.W. | | Deposit date: | 1996-08-06 | | Release date: | 1997-02-12 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (2.19 Å) | | Cite: | Crystal structure analyses of uncomplexed ecotin in two crystal forms: implications for its function and stability.
Protein Sci., 5, 1996
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1ECZ
 | | PROTEASE INHIBITOR ECOTIN | | Descriptor: | ECOTIN, octyl beta-D-glucopyranoside | | Authors: | Shin, D.H, Suh, S.W. | | Deposit date: | 1996-08-06 | | Release date: | 1997-02-12 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (2.68 Å) | | Cite: | Crystal structure analyses of uncomplexed ecotin in two crystal forms: implications for its function and stability.
Protein Sci., 5, 1996
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7WHC
 | | Crystal structure of SARS-CoV-2 3CLpro catalytic domain | | Descriptor: | 3C-like proteinase nsp5 | | Authors: | Shin, D.H, Jo, S.R. | | Deposit date: | 2021-12-30 | | Release date: | 2022-06-15 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.269 Å) | | Cite: | Dimerization Tendency of 3CLpros of Human Coronaviruses Based on the X-ray Crystal Structure of the Catalytic Domain of SARS-CoV-2 3CLpro.
Int J Mol Sci, 23, 2022
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1YTK
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8HHD
 | | Crystal structure of PaMurU | | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Nucleotidyl transferase, SULFATE ION | | Authors: | Shin, D.H, Jo, S.R, Kim, M.S. | | Deposit date: | 2022-11-16 | | Release date: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.27 Å) | | Cite: | Crystal structure of PAMurU
To Be Published
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2BA2
 | | Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae | | Descriptor: | Hypothetical UPF0134 protein MPN010 | | Authors: | Shin, D.H, Kim, J.-S, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2005-10-13 | | Release date: | 2006-03-07 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae.
Protein Sci., 15, 2006
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1YTE
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1YTD
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4L05
 | | Cu/Zn superoxide dismutase from Brucella abortus | | Descriptor: | COPPER (I) ION, COPPER (II) ION, GLYCEROL, ... | | Authors: | Shin, D.S, Didonato, M, Pratt, A.J, Bruns, C.K, Cabelli, D.E, Kroll, J.S, Belzer, C.A, Tabatabai, L.B, Tainer, J.A, Getzoff, E.D. | | Deposit date: | 2013-05-30 | | Release date: | 2013-10-23 | | Last modified: | 2023-09-20 | | Method: | X-RAY DIFFRACTION (1.098 Å) | | Cite: | Structural, Functional, and Immunogenic Insights on Cu,Zn Superoxide Dismutase Pathogenic Virulence Factors from Neisseria meningitidis and Brucella abortus.
J.Bacteriol., 197, 2015
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3F7K
 | | X-ray Crystal Structure of an Alvinella pompejana Cu,Zn Superoxide Dismutase- Hydrogen Peroxide Complex | | Descriptor: | COPPER (I) ION, COPPER (II) ION, Copper,Zinc Superoxide Dismutase, ... | | Authors: | Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A. | | Deposit date: | 2008-11-09 | | Release date: | 2009-02-10 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.35 Å) | | Cite: | Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
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3F7L
 | | X-ray Crystal Structure of Alvinella pompejana Cu,Zn Superoxide Dismutase | | Descriptor: | ACETIC ACID, COPPER (I) ION, COPPER (II) ION, ... | | Authors: | Shin, D.S, DiDonato, M, Barondeau, D.P, Getzoff, E.D, Tainer, J.A. | | Deposit date: | 2008-11-09 | | Release date: | 2009-02-10 | | Last modified: | 2023-09-06 | | Method: | X-RAY DIFFRACTION (0.99 Å) | | Cite: | Superoxide Dismutase from the Eukaryotic Thermophile Alvinella pompejana: Structures, Stability, Mechanism, and Insights into Amyotrophic Lateral Sclerosis.
J.Mol.Biol., 385, 2009
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1JX7
 | | Crystal structure of ychN protein from E.coli | | Descriptor: | HYPOTHETICAL PROTEIN YCHN | | Authors: | Shin, D.H, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2001-09-05 | | Release date: | 2002-09-07 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Crystal structure of a conserved hypothetical protein from Escherichia coli
J.STRUCT.FUNCT.GENOM., 2, 2002
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2I14
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1MZL
 | | MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN | | Descriptor: | MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN | | Authors: | Shin, D.H, Lee, J.Y, Hwang, K.Y, Kim, K.K, Suh, S.W. | | Deposit date: | 1995-01-26 | | Release date: | 1996-08-01 | | Last modified: | 2018-03-21 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedlings.
Structure, 3, 1995
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1T70
 | | Crystal structure of a novel phosphatase from Deinococcus radiodurans | | Descriptor: | Phosphatase | | Authors: | Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2004-05-07 | | Release date: | 2004-12-07 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans.
Proteins, 70, 2008
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2HYB
 | | Crystal Structure of Hexameric DsrEFH | | Descriptor: | DsrH, Intracellular sulfur oxidation protein dsrF, Putative sulfurtransferase dsrE | | Authors: | Shin, D.H, Connie, H, Schulte, A, Dahl, C, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2006-08-04 | | Release date: | 2007-07-03 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal structure of hexameric DsrEFH
To be Published
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2I15
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2HY5
 | | Crystal structure of DsrEFH | | Descriptor: | DsrH, Intracellular sulfur oxidation protein dsrF, Putative sulfurtransferase dsrE | | Authors: | Shin, D.H, Schulte, A, Dahl, C, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2006-08-04 | | Release date: | 2006-09-19 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | Crystal structure of DsrEFH
To be Published
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2I1O
 | | Crystal Structure of a Nicotinate Phosphoribosyltransferase from Thermoplasma acidophilum | | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ... | | Authors: | Shin, D.H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2006-08-14 | | Release date: | 2006-08-29 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal Structure of a zinc ion bound Nicotinate Phosphoribosyltransferase from Thermoplasma acidophilum
To be Published
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1T6X
 | | Crystal structure of ADP bound TM379 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, riboflavin kinase/FMN adenylyltransferase | | Authors: | Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2004-05-07 | | Release date: | 2004-08-10 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.29 Å) | | Cite: | Crystal structure of ADP bound FAD synthetase
To be Published
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1T6Z
 | | Crystal structure of riboflavin bound TM379 | | Descriptor: | RIBOFLAVIN, riboflavin kinase/FMN adenylyltransferase | | Authors: | Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2004-05-07 | | Release date: | 2004-08-10 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal structure of ADP bound FAD synthetase
To be Published
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1T6Y
 | | Crystal structure of ADP, AMP, and FMN bound TM379 | | Descriptor: | ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, ... | | Authors: | Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2004-05-07 | | Release date: | 2004-08-10 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Crystal structure of ADP bound FAD synthetase
To be Published
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