Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5D4W
DownloadVisualize
BU of 5d4w by Molmil
Crystal structure of Hsp104
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Putative heat shock protein
Authors:Heuck, A, Schitter-Sollner, S, Clausen, T.
Deposit date:2015-08-09
Release date:2016-12-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis for the disaggregase activity and regulation of Hsp104.
Elife, 5, 2016
6VJT
DownloadVisualize
BU of 6vjt by Molmil
Co-crystals of broadly neutralizing antibody with the linear epitope from Hepatitis B surface antigen
Descriptor: Heavy Chain Fab Fragment of Monoclonal Ab15, Light Chain Fab Fragment of Monoclonal antibody A15, antigenic region 139-148 of Hepatitis B surface antigen protein
Authors:Oren, D.A, Nussenzweig, M.C, Wang, Q.
Deposit date:2020-01-17
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:A Combination of Human Broadly Neutralizing Antibodies against Hepatitis B Virus HBsAg with Distinct Epitopes Suppresses Escape Mutations.
Cell Host Microbe, 28, 2020
1BKD
DownloadVisualize
BU of 1bkd by Molmil
COMPLEX OF HUMAN H-RAS WITH HUMAN SOS-1
Descriptor: H-RAS, SON OF SEVENLESS-1
Authors:Boriack-Sjodin, P.A, Margarit, S.M, Sagi, D.B, Kuriyan, J.
Deposit date:1998-07-06
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of the activation of Ras by Sos.
Nature, 394, 1998
1RZG
DownloadVisualize
BU of 1rzg by Molmil
Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d
Descriptor: ASPARTIC ACID, CYSTEINE, Fab 412d heavy chain, ...
Authors:Huang, C.C, Venturi, M, Majeed, S, Moore, M.J, Phogat, S, Zhang, M.-Y, Dimitrov, D.S, Hendrickson, W.A, Robinson, J, Sodroski, J, Wyatt, R, Choe, H, Farzan, M, Kwong, P.D.
Deposit date:2003-12-24
Release date:2004-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
Proc.Natl.Acad.Sci.USA, 101, 2004
1RZ7
DownloadVisualize
BU of 1rz7 by Molmil
CRYSTAL STRUCTURE OF HUMAN ANTI-HIV-1 GP120-REACTIVE ANTIBODY 48D
Descriptor: Fab 48d heavy chain, Fab 48d light chain, GLYCEROL
Authors:Huang, C.C, Venturi, M, Majeed, S, Moore, M.J, Phogat, S, Zhang, M.-Y, Dimitrov, D.S, Hendrickson, W.A, Robinson, J, Sodroski, J, Wyatt, R, Choe, H, Farzan, M, Kwong, P.D.
Deposit date:2003-12-24
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
Proc.Natl.Acad.Sci.USA, 101, 2004
1RZF
DownloadVisualize
BU of 1rzf by Molmil
Crystal structure of Human anti-HIV-1 GP120-reactive antibody E51
Descriptor: Fab E51 heavy chain, Fab E51 light chain, GLYCEROL, ...
Authors:Huang, C.C, Venturi, M, Majeed, S, Moore, M.J, Phogat, S, Zhang, M.-Y, Dimitrov, D.S, Hendrickson, W.A, Robinson, J, Sodroski, J, Wyatt, R, Choe, H, Farzan, M, Kwong, P.D.
Deposit date:2003-12-24
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
Proc.Natl.Acad.Sci.USA, 101, 2004
1S6B
DownloadVisualize
BU of 1s6b by Molmil
X-ray Crystal Structure of a Complex Formed Between Two Homologous Isoforms of Phospholipase A2 from Naja naja sagittifera: Principle of Molecular Association and Inactivation
Descriptor: ACETIC ACID, CALCIUM ION, PHOSPHATE ION, ...
Authors:Jabeen, T, Sharma, S, Singh, R.K, Kaur, P, Singh, T.P.
Deposit date:2004-01-23
Release date:2004-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a calcium-induced dimer of two isoforms of cobra phospholipase A2 at 1.6 A resolution.
Proteins, 59, 2005
6YVE
DownloadVisualize
BU of 6yve by Molmil
Glycogen phosphorylase b in complex with pelargonidin 3-O-beta-D-glucoside
Descriptor: DIMETHYL SULFOXIDE, Glycogen phosphorylase, muscle form, ...
Authors:Drakou, C.E, Gardeli, C, Tsialtas, I, Alexopoulos, S, Mallouchos, A, Koulas, S, Tsagkarakou, A, Asimakopoulos, D, Leonidas, D.D, Psarra, A.M, Skamnaki, V.T.
Deposit date:2020-04-28
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Affinity Crystallography Reveals Binding of Pomegranate Juice Anthocyanins at the Inhibitor Site of Glycogen Phosphorylase: The Contribution of a Sugar Moiety to Potency and Its Implications to the Binding Mode.
J.Agric.Food Chem., 68, 2020
8AXC
DownloadVisualize
BU of 8axc by Molmil
Crystal structure of mouse Ces2c
Descriptor: Acylcarnitine hydrolase, CHLORIDE ION, NICOTINAMIDE, ...
Authors:Eisner, H, Riegler-Berket, L, Rodriguez Gamez, C, Sagmeister, T, Chalhoub, G, Darnhofer, B, Panikkaveetil Jawaharlal, J, Birner-Gruenberger, R, Pavkov-Keller, T, Haemmerle, G, Schoiswohl, G, Oberer, M.
Deposit date:2022-08-31
Release date:2022-11-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The Crystal Structure of Mouse Ces2c, a Potential Ortholog of Human CES2, Shows Structural Similarities in Substrate Regulation and Product Release to Human CES1.
Int J Mol Sci, 23, 2022
1LF5
DownloadVisualize
BU of 1lf5 by Molmil
Crystal Structure of RasA59G in the GDP-bound Form
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein P21/H-RAS-1
Authors:Hall, B.E, Bar-Sagi, D, Nassar, N.
Deposit date:2002-04-10
Release date:2002-11-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structural Basis for the Transition from Ras-GTP to Ras-GDP
Proc.Natl.Acad.Sci.USA, 99, 2002
1LF0
DownloadVisualize
BU of 1lf0 by Molmil
Crystal Structure of RasA59G in the GTP-bound form
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Hall, B.E, Bar-Sagi, D, Nassar, N.
Deposit date:2002-04-10
Release date:2002-11-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structural Basis for the Transition from Ras-GTP to Ras-GDP
Proc.Natl.Acad.Sci.USA, 99, 2002
6XIQ
DownloadVisualize
BU of 6xiq by Molmil
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Descriptor: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Zhou, Y, Bartesaghi, A, Silva, G.M.
Deposit date:2020-06-21
Release date:2020-08-26
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
1KR3
DownloadVisualize
BU of 1kr3 by Molmil
Crystal Structure of the Metallo beta-Lactamase from Bacteroides fragilis (CfiA) in Complex with the Tricyclic Inhibitor SB-236050.
Descriptor: 7,8-DIHYDROXY-1-METHOXY-3-METHYL-10-OXO-4,10-DIHYDRO-1H,3H-PYRANO[4,3-B]CHROMENE-9-CARBOXYLIC ACID, SODIUM ION, ZINC ION, ...
Authors:Payne, D.J, Hueso-Rodrguez, J.A, Boyd, H, Concha, N.O, Janson, C.A, Gilpin, M, Bateson, J.H, Cheever, C, Niconovich, N.L, Pearson, S, Rittenhouse, S, Tew, D, Dez, E, Prez, P, de la Fuente, J, Rees, M, Rivera-Sagredo, A.
Deposit date:2002-01-08
Release date:2003-01-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of a series of tricyclic natural products as potent broad-spectrum inhibitors of metallo-beta-lactamases
ANTIMICROB.AGENTS CHEMOTHER., 46, 2002
5JLC
DownloadVisualize
BU of 5jlc by Molmil
Structure of CYP51 from the pathogen Candida glabrata
Descriptor: 2-[(2R)-butan-2-yl]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazin-1-yl]phenyl}-2,4-dihydro-3H-1,2,4-triazol-3-one, CHLORIDE ION, Lanosterol 14-alpha demethylase, ...
Authors:Keniya, M.V, Sabherwal, M, Wilson, R.K, Sagatova, A.A, Tyndall, J.D.A, Monk, B.C.
Deposit date:2016-04-26
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Full-Length Lanosterol 14 alpha-Demethylases of Prominent Fungal Pathogens Candida albicans and Candida glabrata Provide Tools for Antifungal Discovery.
Antimicrob.Agents Chemother., 62, 2018
6XIR
DownloadVisualize
BU of 6xir by Molmil
Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
Descriptor: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Zhou, Y, Bartesaghi, A, Silva, G.M.
Deposit date:2020-06-21
Release date:2020-08-26
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
2XYM
DownloadVisualize
BU of 2xym by Molmil
HCV-JFH1 NS5B T385A mutant
Descriptor: PHOSPHATE ION, RNA-DIRECTED RNA POLYMERASE
Authors:Simister, P.C, Caillet-Saguy, C, Bressanelli, S.
Deposit date:2010-11-18
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.774 Å)
Cite:A Comprehensive Structure-Function Comparison of Hepatitis C Virus Strains Jfh1 and J6 Polymerases Reveals a Key Residue Stimulating Replication in Cell Culture Across Genotypes.
J.Virol., 85, 2011
1B53
DownloadVisualize
BU of 1b53 by Molmil
NMR STRUCTURE OF HUMAN MIP-1A D26A, MINIMIZED AVERAGE STRUCTURE
Descriptor: MIP-1A
Authors:Waltho, J.P, Higgins, L.D, Craven, C.J, Tan, P, Dudgeon, T.
Deposit date:1999-01-11
Release date:1999-07-22
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Identification of amino acid residues critical for aggregation of human CC chemokines macrophage inflammatory protein (MIP)-1alpha, MIP-1beta, and RANTES. Characterization of active disaggregated chemokine variants.
J.Biol.Chem., 274, 1999
1B50
DownloadVisualize
BU of 1b50 by Molmil
NMR STRUCTURE OF HUMAN MIP-1A D26A, 10 STRUCTURES
Descriptor: MIP-1A
Authors:Waltho, J.P, Higgins, L.D, Craven, C.J, Tan, P, Dudgeon, T.
Deposit date:1999-01-11
Release date:1999-07-22
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Identification of amino acid residues critical for aggregation of human CC chemokines macrophage inflammatory protein (MIP)-1alpha, MIP-1beta, and RANTES. Characterization of active disaggregated chemokine variants.
J.Biol.Chem., 274, 1999
4KIL
DownloadVisualize
BU of 4kil by Molmil
7-(4-fluorophenyl)-3-hydroxyquinolin-2(1H)-one bound to influenza 2009 H1N1 endonuclease
Descriptor: 1,2-ETHANEDIOL, 7-(4-fluorophenyl)-3-hydroxyquinolin-2(1H)-one, MANGANESE (II) ION, ...
Authors:Bauman, J.D, Patel, D, Das, K, Arnold, E.
Deposit date:2013-05-02
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:3-Hydroxyquinolin-2(1H)-ones As Inhibitors of Influenza A Endonuclease.
ACS Med Chem Lett, 4, 2013
8CMK
DownloadVisualize
BU of 8cmk by Molmil
Transportin-3 TNPO3 in complex with RSY region of CIRBP
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, Cold-inducible RNA-binding protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Q, Sagmeister, T, Pavkov-Keller, T, Madl, T.
Deposit date:2023-02-20
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:Tyrosine mediated nuclear import of CIRBP reveals a flexible NLS recognition by TNPO3
To Be Published
6AZY
DownloadVisualize
BU of 6azy by Molmil
Crystal structure of Hsp104 R328M/R757M mutant from Calcarisporiella thermophila
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein Hsp104
Authors:Michalska, K, Bigelow, L, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2017-09-13
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.
Structure, 27, 2019
8EC6
DownloadVisualize
BU of 8ec6 by Molmil
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Descriptor: Isoform 2 of Glutaminase kidney isoform, mitochondrial, PHOSPHATE ION
Authors:Ambrosio, A.L, Dias, S.M, Quesnay, J.E, Portugal, R.V, Cassago, A, van Heel, M.G, Islam, Z, Rodrigues, C.T.
Deposit date:2022-09-01
Release date:2023-09-20
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular mechanism of glutaminase activation through filamentation and the role of filaments in mitophagy protection.
Nat.Struct.Mol.Biol., 30, 2023
5EAF
DownloadVisualize
BU of 5eaf by Molmil
Saccharomyces cerevisiae CYP51 complexed with the plant pathogen inhibitor Fluquinconazole
Descriptor: 3-(2,4-dichlorophenyl)-6-fluoranyl-2-(1,2,4-triazol-1-yl)quinazolin-4-one, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tyndall, J.D.A, Sabherwal, M, Sagatova, A.A, Keniya, M.V, Wilson, R.K, Woods, M.V, Monk, B.C.
Deposit date:2015-10-16
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and Functional Elucidation of Yeast Lanosterol 14 alpha-Demethylase in Complex with Agrochemical Antifungals.
PLoS ONE, 11, 2016
5EAB
DownloadVisualize
BU of 5eab by Molmil
Saccharomyces cerevisiae CYP51 complexed with the plant pathogen inhibitor S-tebuconazole
Descriptor: (3~{S})-1-(4-chlorophenyl)-4,4-dimethyl-3-(1,2,4-triazol-1-ylmethyl)pentan-3-ol, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tyndall, J.D.A, Sabherwal, M, Sagatova, A.A, Keniya, M.V, Wilson, R.K, Woods, M.V, Monk, B.C.
Deposit date:2015-10-16
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Functional Elucidation of Yeast Lanosterol 14 alpha-Demethylase in Complex with Agrochemical Antifungals.
PLoS ONE, 11, 2016
8HTB
DownloadVisualize
BU of 8htb by Molmil
Staphylococcus aureus FtsZ 12-316 complexed with TXH9179
Descriptor: 3-[(6-ethynyl-[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Bryan, E, Ferrer-Gonzalez, E, Sagong, H.Y, Fujita, J, Mark, L, Kaul, M, LaVoie, E.J, Matsumura, H, Pilch, D.S.
Deposit date:2022-12-21
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural and Antibacterial Characterization of a New Benzamide FtsZ Inhibitor with Superior Bactericidal Activity and In Vivo Efficacy Against Multidrug-Resistant Staphylococcus aureus.
Acs Chem.Biol., 18, 2023

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon