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3J1W
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A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
Descriptor: Protein PrgH
Authors:Sgourakis, N.G, Worrall, L.J, Strynadka, N.C.J, Baker, D.
Deposit date:2012-07-10
Release date:2013-05-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013
3CT0
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BU of 3ct0 by Molmil
Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Morphogenesis protein 1
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2008-04-11
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3J2A
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BU of 3j2a by Molmil
Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
Descriptor: 16S rRNA
Authors:Guo, Q, Goto, S, Chen, Y, Muto, A, Himeno, H, Deng, H, Lei, J, Gao, N.
Deposit date:2012-09-28
Release date:2013-01-16
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (13.1 Å)
Cite:Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM and general features of the assembly process
Nucleic Acids Res., 41, 2013
3CT6
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BU of 3ct6 by Molmil
Crystal structure of DhaM of L. lactis
Descriptor: PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM
Authors:Zurbriggen, A.
Deposit date:2008-04-11
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:X-ray Structures of the Three Lactococcus lactis Dihydroxyacetone Kinase Subunits and of a Transient Intersubunit Complex.
J.Biol.Chem., 283, 2008
3JWW
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BU of 3jww by Molmil
Structure of endothelial nitric oxide synthase heme domain complexed with N1-[(3'S,4'S)-4'-((6"-amino-4"-methylpyridin-2"-yl)methyl)pyrrolidin-3'-yl]-N2- (3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLIC ACID, ...
Authors:Delker, S.L, Li, H, Poulos, T.L.
Deposit date:2009-09-18
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model.
J.Am.Chem.Soc., 132, 2010
3J2W
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BU of 3j2w by Molmil
Electron cryo-microscopy of Chikungunya virus
Descriptor: Capsid protein, Glycoprotein E1, Glycoprotein E2
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3J6J
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BU of 3j6j by Molmil
3.6 Angstrom resolution MAVS filament generated from helical reconstruction
Descriptor: Mitochondrial antiviral-signaling protein
Authors:Wu, B, Peisley, A, Li, Z, Egelman, E, Walz, T, Penczek, P, Hur, S.
Deposit date:2014-03-13
Release date:2014-07-30
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
3CKW
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BU of 3ckw by Molmil
Crystal structure of sterile 20-like kinase 3 (MST3, STK24)
Descriptor: MERCURY (II) ION, Serine/threonine-protein kinase 24
Authors:Antonysamy, S.S, Burley, S.K, Buchanan, S, Chau, F, Feil, I, Wu, L, Sauder, J.M, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-17
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of sterile 20-like kinase 3 (MST3, STK24).
To be Published
3JX5
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BU of 3jx5 by Molmil
Structure of rat neuronal nitric oxide synthase D597N/M336V mutant heme domain in complex with N1-{(3'S,4'R)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-{(3S,4R)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine, ...
Authors:Delker, S.L, Li, H, Poulos, T.L.
Deposit date:2009-09-18
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model.
J.Am.Chem.Soc., 132, 2010
3JXS
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BU of 3jxs by Molmil
Crystal structure of XG34, an evolved xyloglucan binding CBM
Descriptor: ACETATE ION, CALCIUM ION, Xylanase
Authors:Divne, C, Tan, T.-C, Brumer, H, Gullfot, F.
Deposit date:2009-09-21
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of XG-34, an evolved xyloglucan-specific carbohydrate-binding module.
Proteins, 78, 2009
3CWA
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BU of 3cwa by Molmil
Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base Pair
Descriptor: DNA (5'-D(*(8OG)P*DAP*DCP*DAP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3'), DNA-3-methyladenine glycosylase 2
Authors:Bowman, B.R, Lee, S, Wang, S, Verdine, G.L.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the E. coli DNA Glycosylase AlkA Bound to the Ends of Duplex DNA: A System for the Structure Determination of Lesion-Containing DNA.
Structure, 16, 2008
3JYC
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BU of 3jyc by Molmil
Crystal structure of the eukaryotic strong inward-rectifier K+ channel Kir2.2 at 3.1 Angstrom resolution
Descriptor: Inward-rectifier K+ channel Kir2.2, POTASSIUM ION
Authors:Tao, X.
Deposit date:2009-09-21
Release date:2010-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal structure of the eukaryotic strong inward-rectifier K+ channel Kir2.2 at 3.1 A resolution.
Science, 326, 2009
3J6U
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BU of 3j6u by Molmil
Cryo-EM structure of Dengue virus serotype 3 in complex with human antibody 5J7 Fab
Descriptor: Fab 5J7 heavy chain, Fab 5J7 light chain, envelope protein, ...
Authors:Fibriansah, G, Tan, J.L, Smith, S.A, de Alwis, R, Ng, T.-S, Kostyuchenko, V.A, Kukkaro, P, de Silva, A.M, Crowe Jr, J.E, Lok, S.-M.
Deposit date:2014-03-26
Release date:2015-03-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:A highly potent human antibody neutralizes dengue virus serotype 3 by binding across three surface proteins.
Nat Commun, 6, 2015
3JZH
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BU of 3jzh by Molmil
EED-H3K79me3
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Xu, C, Bian, C.B, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-23
Release date:2009-12-15
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
3JZR
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BU of 3jzr by Molmil
Human MDM2 liganded with a 12mer peptide inhibitor (pDI6W)
Descriptor: E3 ubiquitin-protein ligase Mdm2, pDI6W peptide (12mer)
Authors:Schonbrunn, E, Phan, J.
Deposit date:2009-09-24
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based design of high affinity peptides inhibiting the interaction of p53 with MDM2 and MDMX.
J.Biol.Chem., 285, 2010
3J8Y
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BU of 3j8y by Molmil
High-resolution structure of ATP analog-bound kinesin on microtubules
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Shang, Z, Zhou, K, Xu, C, Csencsits, R, Cochran, J.C, Sindelar, C.V.
Deposit date:2014-11-20
Release date:2014-12-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (5 Å)
Cite:High-resolution structures of kinesin on microtubules provide a basis for nucleotide-gated force-generation.
Elife, 3, 2014
3CO0
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BU of 3co0 by Molmil
Substrate Complex of Fluoride-sensitive Engineered Subtilisin SUBT_BACAM
Descriptor: Subtilisin BPN', ZINC ION
Authors:Gallagher, D.T, Bryan, P.N.
Deposit date:2008-03-26
Release date:2008-10-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of a switchable subtilisin complexed with a substrate and with the activator azide.
Biochemistry, 48, 2009
3COD
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BU of 3cod by Molmil
Crystal Structure of T90A/D115A mutant of Bacteriorhodopsin
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Joh, N.H, Min, A, Faham, S, Bowie, J.U.
Deposit date:2008-03-27
Release date:2008-04-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins.
Nature, 453, 2008
3J97
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BU of 3j97 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State II)
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
Deposit date:2014-12-05
Release date:2015-01-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
3K1H
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BU of 3k1h by Molmil
Crystal structure of HP1076 from H.pylori
Descriptor: Putative uncharacterized protein
Authors:Lam, W.W.L, Ling, T.K.W, Woo, E.J, Au, S.W.N.
Deposit date:2009-09-28
Release date:2010-06-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Molecular interaction of flagellar export chaperone FliS and cochaperone HP1076 in Helicobacter pylori
Faseb J., 24, 2010
3D4V
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BU of 3d4v by Molmil
Crystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base Pair
Descriptor: 5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(FMG)P*DTP*DGP*DCP*DC)-3', 5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3', DNA-3-methyladenine glycosylase 2
Authors:Lee, S, Bowman, B.R, Wang, S, Verdine, G.L.
Deposit date:2008-05-15
Release date:2008-09-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Synthesis and structure of duplex DNA containing the genotoxic nucleobase lesion N7-methylguanine.
J.Am.Chem.Soc., 130, 2008
3CPF
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BU of 3cpf by Molmil
Crystal structure of human eukaryotic translation initiation factor EIF5A
Descriptor: Eukaryotic translation initiation factor 5A-1, UNKNOWN ATOM OR ION
Authors:Nedyalkova, L, Tong, Y, Tempel, W, Hong, B, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-03-31
Release date:2008-04-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human eIF5A1: insight into functional similarity of human eIF5A1 and eIF5A2.
Proteins, 75, 2009
3K2B
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BU of 3k2b by Molmil
Crystal structure of photosynthetic A4 isoform glyceraldehyde-3-phosphate dehydrogenase complexed with NAD, from Arabidopsis thaliana
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Fermani, S, Falini, G, Thumiger, A, Sparla, F, Marri, L, Trost, P.
Deposit date:2009-09-29
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase (isoform A4) from Arabidopsis thaliana in complex with NAD
Acta Crystallogr.,Sect.F, 66, 2010
3K3C
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BU of 3k3c by Molmil
The N-terminal PAS domain crystal structure of Rv1364c from Mycobacterium tuberculosis at 1.62
Descriptor: GLYCEROL, PALMITIC ACID, Protein Rv1364c/MT1410, ...
Authors:King-Scott, J, Tucker, P.A.
Deposit date:2009-10-02
Release date:2010-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The N-terminal PAS domain crystal structure of Rv1364c from Mycobacterium tuberculosis at 1.62
To be Published
3CPT
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BU of 3cpt by Molmil
MP1-p14 Scaffolding complex
Descriptor: Mitogen-activated protein kinase kinase 1-interacting protein 1, Mitogen-activated protein-binding protein-interacting protein
Authors:Schrag, J.D, Cygler, M, Munger, C, Magloire, A.
Deposit date:2008-04-01
Release date:2008-07-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex.
J.Mol.Biol., 379, 2008

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