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PDB: 31 results

7CM4
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BU of 7cm4 by Molmil
Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59
Descriptor: 1,2-ETHANEDIOL, IgG heavy chain, IgG light chain, ...
Authors:Kim, Y.G, Jeong, J.H, Bae, J.S, Lee, J.
Deposit date:2020-07-24
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:A therapeutic neutralizing antibody targeting receptor binding domain of SARS-CoV-2 spike protein.
Nat Commun, 12, 2021
4L7M
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BU of 4l7m by Molmil
Crystal structure of the archaeal HEAT-like repeats protein TON_1937 from Thermococcus onnurineus NA1
Descriptor: GLYCEROL, Putative uncharacterized protein
Authors:Kim, Y.G, Jeong, J.H.
Deposit date:2013-06-14
Release date:2013-07-10
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of the archaeal HEAT-like repeats protein TON_1937 from Thermococcus onnurineus NA1
To be Published
4UZ0
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BU of 4uz0 by Molmil
Crystal Structure of apoptosis repressor with CARD (ARC)
Descriptor: GLYCEROL, NUCLEOLAR PROTEIN 3
Authors:Kim, S.H, Jeong, J.H, Jang, T.H, Kim, Y.G, Park, H.H.
Deposit date:2014-09-04
Release date:2015-07-01
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
Sci.Rep., 5, 2015
4UY5
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BU of 4uy5 by Molmil
Crystal structure of Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: ACETATE ION, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD, IMIDAZOLE
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
4UY7
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BU of 4uy7 by Molmil
Crystal structure of Histidine bound Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: HISTIDINE, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
4V3I
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BU of 4v3i by Molmil
Crystal Structure of TssL from Vibrio cholerae.
Descriptor: GLYCEROL, VCA0115
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-10-19
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Crystal structure of the bacterial type VI secretion system component TssL from Vibrio cholerae.
J. Microbiol., 53, 2015
4UY6
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BU of 4uy6 by Molmil
Crystal structure of Histidine and SAH bound Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HISTIDINE, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
2XMO
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BU of 2xmo by Molmil
The crystal structure of Lmo2642
Descriptor: CALCIUM ION, FE (III) ION, LMO2642 PROTEIN, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2010-07-28
Release date:2011-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Analysis of the Lmo2642 Cyclic Nucleotide Phosphodiesterase from Listeria Monocytogenes.
Proteins, 79, 2011
4ARZ
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BU of 4arz by Molmil
The crystal structure of Gtr1p-Gtr2p complexed with GTP-GDP
Descriptor: GTP-BINDING PROTEIN GTR1, GTP-BINDING PROTEIN GTR2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-04-27
Release date:2012-07-25
Last modified:2012-09-05
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Gtr1Pgtp-Gtr2Pgdp Complex Reveals Large Structural Rearrangements Triggered by GTP-to-Gdp Conversion
J.Biol.Chem., 287, 2012
4D2K
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BU of 4d2k by Molmil
Crystal structure of DREP2 CIDE domain
Descriptor: DREP2
Authors:Jang, T.H, Park, H.H, Kim, Y.G, Jeong, J.H.
Deposit date:2014-05-12
Release date:2015-05-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:CIDE domains form functionally important higher-order assemblies for DNA fragmentation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X1U
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BU of 5x1u by Molmil
Structure of the cytosolic domain of DotM derived from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Kwak, M.J, Kim, Y.G, Oh, B.H.
Deposit date:2017-01-26
Release date:2017-06-14
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
3CRC
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BU of 3crc by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
3CRA
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BU of 3cra by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
1SFU
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BU of 1sfu by Molmil
Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA
Descriptor: 34L protein, 5'-D(*T*CP*GP*CP*GP*CP*G)-3'
Authors:Ha, S.C, Van Quyen, D, Wu, C.A, Lowenhaupt, K, Rich, A, Kim, Y.G, Kim, K.K.
Deposit date:2004-02-20
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Proc.Natl.Acad.Sci.USA, 101, 2004
5X90
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BU of 5x90 by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA derived from Legionella pneumophila
Descriptor: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
Authors:Kim, H, Kwak, M.J, Kim, J.D, Kim, Y.G, Oh, B.H.
Deposit date:2017-03-04
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
4K1V
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BU of 4k1v by Molmil
Crystal structure of delta5-3-ketosteroid isomerase containing Y16F and Y57F mutations
Descriptor: Steroid Delta-isomerase
Authors:Cha, H.J, Jang, D.S, Kim, Y.G, Hong, B.H, Woo, J.S, Choi, K.Y.
Deposit date:2013-04-05
Release date:2013-07-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rescue of deleterious mutations by the compensatory Y30F mutation in ketosteroid isomerase
Mol.Cells, 36, 2013
4K1U
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BU of 4k1u by Molmil
Crystal structure of delta5-3-ketosteroid isomerase containing Y16F and Y32F mutations
Descriptor: Steroid Delta-isomerase
Authors:Cha, H.J, Jang, D.S, Kim, Y.G, Hong, B.H, Woo, J.S, Choi, K.Y.
Deposit date:2013-04-05
Release date:2013-07-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rescue of deleterious mutations by the compensatory Y30F mutation in ketosteroid isomerase
Mol.Cells, 36, 2013
3ZG8
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BU of 3zg8 by Molmil
Crystal Structure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form
Descriptor: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.094 Å)
Cite:Crystal Structures of Bifunctional Penicillin-Binding Protein 4 from Listeria Monocytogenes.
Antimicrob.Agents Chemother., 57, 2013
3ZGA
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BU of 3zga by Molmil
Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form
Descriptor: (2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN 4
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Crystal Structures of Bifunctional Penicillin-Binding Protein 4 from Listeria Monocytogenes.
Antimicrob.Agents Chemother., 57, 2013
7C3K
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BU of 7c3k by Molmil
Crystal Structure of mIRGB10
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Immunity-related GTPase family member b10
Authors:Ha, H.J, Jeong, J.H, Kim, Y.G, Park, H.H.
Deposit date:2020-05-12
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of IRGB10 oligomerization and membrane association for pathogen membrane disruption.
Commun Biol, 4, 2021
3ZG9
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BU of 3zg9 by Molmil
Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form
Descriptor: (2R)-5-[(carbamoyloxy)methyl]-2-[(1R)-1-{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}-2-oxoethyl]-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN 4
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2014-01-15
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Crystal Structures of Penicillin-Binding Protein 4 from Listeria Monocytogenes
To be Published
4UOX
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BU of 4uox by Molmil
Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate and putrescine
Descriptor: 1,4-DIAMINOBUTANE, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-06-11
Release date:2014-12-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:Structure of Putrescine Aminotransferase from Escherichia Coli Provides Insights Into the Substrate Specificity Among Class III Aminotransferases.
Plos One, 9, 2014
4UOY
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BU of 4uoy by Molmil
Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate
Descriptor: FORMIC ACID, GLYCEROL, PUTRESCINE AMINOTRANSFERASE, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-06-11
Release date:2014-12-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Structure of Putrescine Aminotransferase from Escherichia Coli Provides Insights Into the Substrate Specificity Among Class III Aminotransferases.
Plos One, 9, 2014
5ZQB
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BU of 5zqb by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Penicillin G bound form
Descriptor: GLYCEROL, Lmo2812 protein, OPEN FORM - PENICILLIN G
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
5ZQD
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Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Cefotaxime bound form
Descriptor: CEFOTAXIME, C3' cleaved, open, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.888 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018

 

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