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PDB: 64 results

1SYT
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BU of 1syt by Molmil
Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
Descriptor: BP40, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, J, Prem Kumar, R, Srivastava, D.B, Sharma, S, Singh, T.P.
Deposit date:2004-04-02
Release date:2004-04-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution
to be published
1OWQ
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BU of 1owq by Molmil
Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, signal processing protein
Authors:Kumar, J, Sharma, S, Jasti, J, Bhushan, A, Singh, T.P.
Deposit date:2003-03-29
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
To be Published
7VE5
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BU of 7ve5 by Molmil
C-terminal domain of VraR
Descriptor: DNA-binding response regulator, MAGNESIUM ION, R1-DNA
Authors:Kumar, J.V, Chen, C, Hsu, C.H.
Deposit date:2021-09-08
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
1N76
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BU of 1n76 by Molmil
CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, LACTOFERRIN, ...
Authors:Kumar, J, Weber, W, Munchau, S, Yadav, S, Singh, S.B, Sarvanan, K, Paramsivam, M, Sharma, S, Kaur, P, Bhushan, A, Srinivasan, A, Betzel, C, Singh, T.P.
Deposit date:2002-11-12
Release date:2003-02-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of human seminal lactoferrin at 3.4A resolution
Indian J.Biochem.Biophys., 40, 2003
3U92
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BU of 3u92 by Molmil
Crystal structure of the GluK3 ligand binding domain complex with kainate and zinc: P2221 form
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, CHLORIDE ION, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-10-17
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Zinc Potentiates GluK3 Glutamate Receptor Function by Stabilizing the Ligand Binding Domain Dimer Interface.
Neuron, 76, 2012
3U94
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BU of 3u94 by Molmil
Crystal structure of the GluK3 ligand binding domain complex with glutamate and zinc: P21212 form
Descriptor: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-10-17
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.962 Å)
Cite:Zinc Potentiates GluK3 Glutamate Receptor Function by Stabilizing the Ligand Binding Domain Dimer Interface.
Neuron, 76, 2012
3U93
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BU of 3u93 by Molmil
Crystal structure of the GluK3 ligand binding domain complex with glutamate and zinc: P2221 form
Descriptor: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-10-17
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Zinc Potentiates GluK3 Glutamate Receptor Function by Stabilizing the Ligand Binding Domain Dimer Interface.
Neuron, 76, 2012
3OLZ
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BU of 3olz by Molmil
Crystal structure of the GluK3 (GluR7) ATD dimer at 2.75 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2010-08-26
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structures of the Glutamate Receptor Ion Channel GluK3 and GluK5 Amino-Terminal Domains.
J.Mol.Biol., 404, 2010
3OM0
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BU of 3om0 by Molmil
Crystal structure of the GluK5 (KA2) ATD crystallographic dimer at 1.4 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2010-08-26
Release date:2010-11-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Crystal Structures of the Glutamate Receptor Ion Channel GluK3 and GluK5 Amino-Terminal Domains.
J.Mol.Biol., 404, 2010
3OM1
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BU of 3om1 by Molmil
Crystal structure of the GluK5 (KA2) ATD dimer at 1.7 Angstrom Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2010-08-26
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.677 Å)
Cite:Crystal Structures of the Glutamate Receptor Ion Channel GluK3 and GluK5 Amino-Terminal Domains.
J.Mol.Biol., 404, 2010
3QLV
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BU of 3qlv by Molmil
Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD tetramer assembly
Descriptor: Glutamate receptor, ionotropic kainate 2, ionotropic kainate 5
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-02-03
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:Structure and assembly mechanism for heteromeric kainate receptors.
Neuron, 71, 2011
3QLU
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BU of 3qlu by Molmil
Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD dimer assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-02-03
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structure and assembly mechanism for heteromeric kainate receptors.
Neuron, 71, 2011
7VE6
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BU of 7ve6 by Molmil
N-terminal domain of VraR
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator protein VraR
Authors:Kumar, J.V, Chen, C, Hsu, C.H.
Deposit date:2021-09-08
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
7VE4
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BU of 7ve4 by Molmil
C-terminal domain of VraR
Descriptor: DNA-binding response regulator
Authors:Kumar, J.V, Chen, C, Hsu, C.H.
Deposit date:2021-09-08
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
6KZM
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BU of 6kzm by Molmil
GluK3 receptor complex with kainate
Descriptor: Glutamate receptor ionotropic, kainate 3
Authors:Kumar, J, Kumari, J, Burada, A.P.
Deposit date:2019-09-24
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
6L6F
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BU of 6l6f by Molmil
GluK3 receptor complex with UBP301
Descriptor: Glutamate receptor ionotropic, kainate 3
Authors:Kumar, J, Kumari, J, Burada, A.P.
Deposit date:2019-10-28
Release date:2020-03-04
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM.
Int.J.Biol.Macromol., 149, 2020
3H6G
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BU of 3h6g by Molmil
Crystal structure of the GluR6 amino terminal domain dimer assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2009-04-23
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:The N-terminal domain of GluR6-subtype glutamate receptor ion channels.
Nat.Struct.Mol.Biol., 16, 2009
3H6H
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BU of 3h6h by Molmil
Crystal structure of the GluR6 amino terminal domain dimer assembly MPD form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2009-04-23
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:The N-terminal domain of GluR6-subtype glutamate receptor ion channels.
Nat.Struct.Mol.Biol., 16, 2009
6LU9
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BU of 6lu9 by Molmil
Rat ionotropic Glutamate Delta-2 receptor in complex with 7-CKA and Calcium
Descriptor: Glutamate receptor ionotropic, delta-2
Authors:Kumar, J, Burada, A.P.
Deposit date:2020-01-27
Release date:2020-06-17
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The architecture of GluD2 ionotropic delta glutamate receptor elucidated by cryo-EM.
J.Struct.Biol., 211, 2020
3QLT
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BU of 3qlt by Molmil
Crystal structure of a GluK2 (GluR6) glycan wedge homodimer assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor, ionotropic kainate 2
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-02-03
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.988 Å)
Cite:Structure and assembly mechanism for heteromeric kainate receptors.
Neuron, 71, 2011
5ZKA
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BU of 5zka by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
Authors:Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
Deposit date:2018-03-23
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
2ESC
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BU of 2esc by Molmil
Crystal structure of a 40 KDa protective signalling protein from Bovine (SPC-40) at 2.1 A resolution
Descriptor: Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kumar, J, Ethayathulla, A.S, Srivastav, D.B, Sharma, S, Srinivasan, A, Singh, T.P.
Deposit date:2005-10-26
Release date:2005-12-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a bovine secretory signalling glycoprotein (SPC-40) at 2.1 Angstrom resolution.
Acta Crystallogr.,Sect.D, 62, 2006
5Z2G
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BU of 5z2g by Molmil
Crystal Structure of L-amino acid oxidase from venom of Naja atra
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase
Authors:Kumar, J.V, Chien, K.Y, Wu, W.G, Lin, C.C, Chiang, L.C, Lin, T.H.
Deposit date:2018-01-02
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.676 Å)
Cite:Crystal Structure of L-amino acid oxidase from naja atra (Taiwan Cobra)
To Be Published
5ZJM
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BU of 5zjm by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase
Authors:Kumar, J.P, Rao, H, Nayak, V, Subramanian, R.
Deposit date:2018-03-21
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
1ZBW
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BU of 1zbw by Molmil
Crystal structure of the complex formed between signalling protein from goat mammary gland (SPG-40) and a tripeptide Trp-Pro-Trp at 2.8A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1, WPW
Authors:Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
Deposit date:2005-04-09
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the complex formed between signalling protein from goat mammary gland (SPG-40) and a tripeptide Trp-Pro-Trp at 2.8A resolution
to be published

 

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