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PDB: 318 results

7M6C
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Crystal structure of PLA2 from snake venom of peruvian Bothrops atrox
Descriptor: Basic phospholipase A2, LAURIC ACID
Authors:Leonardo, D.A, Chojnowski, G, Simpkin, A, Seifert-Davila, W, Vivas-Ruiz, D.E, Keegan, R, Rigden, D.
Deposit date:2021-03-25
Release date:2022-01-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM
Iucrj, 9, 2022
4RFP
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Crystal structure of a acidic PLA2 from Trimeresurus stejnegeri venom
Descriptor: Acidic phospholipase A2 5, DI(HYDROXYETHYL)ETHER
Authors:Zeng, F, Niu, L, Li, X, Teng, M.
Deposit date:2014-09-26
Release date:2014-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a acidic PLA2 from Trimeresurus stejnegeri venom
To be Published
1HN4
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PROPHOSPHOLIPASE A2 DIMER COMPLEXED WITH MJ33, SULFATE, AND CALCIUM
Descriptor: 1-HEXADECYL-3-TRIFLUOROETHYL-SN-GLYCERO-2-PHOSPHATE METHANE, CALCIUM ION, PROPHOSPHOLIPASE A2, ...
Authors:Epstein, T.M, Pan, Y.H, Jain, M.K, Bahnson, B.J.
Deposit date:2000-12-06
Release date:2001-12-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The basis for k(cat) impairment in prophospholipase A(2) from the anion-assisted dimer structure.
Biochemistry, 40, 2001
7LYE
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Myotoxin I from Bothrops moojeni co-crystallized with synthetic inhibitor Varespladib (LY315920)
Descriptor: ({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog BomoTx
Authors:Salvador, G.H.M, Borges, R.J, Fontes, M.R.M.
Deposit date:2021-03-06
Release date:2021-05-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.758 Å)
Cite:The synthetic varespladib molecule is a multi-functional inhibitor for PLA 2 and PLA 2 -like ophidic toxins.
Biochim Biophys Acta Gen Subj, 1865, 2021
3JR8
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BU of 3jr8 by Molmil
Crystal Structure of BthTX-II (Asp49-PLA2 from Bothrops jararacussu snake venom) with calcium ions
Descriptor: CALCIUM ION, Phospholipase A2 bothropstoxin-2
Authors:Borges, R.J, dos Santos, J.I, Fontes, M.R.M.
Deposit date:2009-09-08
Release date:2010-09-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural, functional, and bioinformatics studies reveal a new snake venom homologue phospholipase A2 class.
Proteins, 79, 2011
4UY1
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Novel pyrazole series of group X Secretory Phospholipase A2 (sPLA2-X) inhibitors
Descriptor: 5-(2,5-DIMETHYL-3-THIENYL)-1H-PYRAZOLE-3-CARBOXAMIDE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sandmark, J, Oster, L, Hallberg, K, Bodin, C, Chen, H.
Deposit date:2014-08-28
Release date:2014-10-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Novel Pyrazole Series of Group X Secreted Phospholipase A2 Inhibitor (Spla2X) Via Fragment Based Virtual Screening
Bioorg.Med.Chem.Lett., 24, 2014
5Y5E
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Crystal structure of phospholipase A2 with inhibitor
Descriptor: 2-[2-methyl-3-oxamoyl-1-[[2-(trifluoromethyl)phenyl]methyl]indol-4-yl]oxyethanoic acid, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Hou, S, Xu, J, Xu, T, Liu, J.
Deposit date:2017-08-08
Release date:2018-06-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for functional selectivity and ligand recognition revealed by crystal structures of human secreted phospholipase A2group IIE
Sci Rep, 7, 2017
4WTB
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BthTX-I, a svPLA2s-like toxin, complexed with zinc ions
Descriptor: Basic phospholipase A2 homolog bothropstoxin-1, CHLORIDE ION, SULFATE ION, ...
Authors:Borges, R.J, Fontes, M.R.M.
Deposit date:2014-10-29
Release date:2015-11-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Functional and structural studies of a Phospholipase A2-like protein complexed to zinc ions: Insights on its myotoxicity and inhibition mechanism.
Biochim. Biophys. Acta, 1861, 2017
8DND
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Crystal structure of Bothrops pirajai Piratoxin-I (PrTX-I) and synthetic inhibitor Varespladib (LY315920)
Descriptor: ({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid, Basic phospholipase A2 homolog piratoxin-1, SULFATE ION
Authors:Salvador, G.H.M, Fontes, M.R.M.
Deposit date:2022-07-11
Release date:2023-08-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.018 Å)
Cite:Structural basis of the myotoxic inhibition of the Bothrops pirajai PrTX-I by the synthetic varespladib.
Biochimie, 207, 2023
7ROX
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BU of 7rox by Molmil
BthTX-I complexed with inhibitor MMV
Descriptor: 12-methoxy-Nb-methylvoachalotine, Basic phospholipase A2 homolog bothropstoxin-I
Authors:Borges, R.J, De Marino, I, Uson, I, Fontes, M.R.M.
Deposit date:2021-08-02
Release date:2022-11-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of a snake venom phospholipase A 2 -like protein complexed to an inhibitor from Tabernaemontana catharinensis.
Biochimie, 206, 2023
6TMY
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Crystal structure of isoform CBd of the basic phospholipase A2 subunit of crotoxin from Crotalus durissus terrificus
Descriptor: CHLORIDE ION, Phospholipase A2 crotoxin basic subunit CBc, SODIUM ION, ...
Authors:Nemecz, D, Ostrowski, M, Saul, F.A, Faure, G.
Deposit date:2019-12-05
Release date:2020-12-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Isoform CBd of the Basic Phospholipase A 2 Subunit of Crotoxin: Description of the Structural Framework of CB for Interaction with Protein Targets.
Molecules, 25, 2020
6KQU
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BU of 6kqu by Molmil
Crystal structure of phospholipase A2
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Hou, S, Xu, T, Liu, J.
Deposit date:2019-08-18
Release date:2020-08-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Residue Asn21 acts as a switch for calcium binding to modulate the enzymatic activity of human phospholipase A2 group IIE.
Biochimie, 176, 2020
4YZ7
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BU of 4yz7 by Molmil
Crystal structure of Piratoxin I (PrTX-I) complexed to aristolochic acid
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 9-HYDROXY ARISTOLOCHIC ACID, Basic phospholipase A2 homolog piratoxin-1, ...
Authors:Fernandes, C.A.H, Fontes, M.R.M.
Deposit date:2015-03-24
Release date:2015-08-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9589 Å)
Cite:Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids.
Plos One, 10, 2015
6G5J
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Secreted phospholipase A2 type X in complex with ligand
Descriptor: (3~{R})-3-[3-[2-aminocarbonyl-6-(trifluoromethyloxy)indol-1-yl]phenyl]butanoic acid, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sandmark, J, Oster, L.
Deposit date:2018-03-29
Release date:2018-09-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design of Selective sPLA2-X Inhibitor (-)-2-{2-[Carbamoyl-6-(trifluoromethoxy)-1H-indol-1-yl]pyridine-2-yl}propanoic Acid.
ACS Med Chem Lett, 9, 2018
5TFV
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Crystal Structure of MT-I isolated from Bothrops asper venom.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Basic phospholipase A2 myotoxin III
Authors:Salvador, G.H.M, dos Santos, J.I, Fontes, M.R.M.
Deposit date:2016-09-26
Release date:2017-10-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of a phospholipase A2 from Bothrops asper venom: Insights into a new putative "myotoxic cluster".
Biochimie, 133, 2017
4DBK
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Crystal structure of porcine pancreatic phospholipase A2 complexed with berberine
Descriptor: BERBERINE, CALCIUM ION, Phospholipase A2, ...
Authors:Naveen, C.D, Abhilash, J, Prasanth, G.K, Sadasivan, C, Haridas, M.
Deposit date:2012-01-16
Release date:2012-01-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of porcine pancreatic phospholipase A2 complexed with berberine
To be Published
5G3N
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Discovery of a novel secreted phospholipase A2 (sPLA2) inhibitor.
Descriptor: 3-(5'-BENZYL-2'-CARBAMOYLBIPHENYL-3-YL)PROPANOIC ACID, CALCIUM ION, FORMIC ACID, ...
Authors:Sandmark, J, Bodin, C, Hallberg, K.
Deposit date:2016-04-29
Release date:2016-09-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of Azd2716: A Novel Secreted Phospholipase A2 (Spla2) Inhibitor for the Treatment of Coronary Artery Disease
Acs Med.Chem.Lett., 7, 2016
5G3M
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Discovery of a novel secreted phospholipase A2 (sPLA2) inhibitor.
Descriptor: 4-BENZYLBENZAMIDE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sandmark, J, Bodin, C, Hallberg, K.
Deposit date:2016-04-29
Release date:2016-09-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of Azd2716: A Novel Secreted Phospholipase A2 (Spla2) Inhibitor for the Treatment of Coronary Artery Disease
Acs Med.Chem.Lett., 7, 2016
7RJI
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BthTX-II variant b, from Bothrops jararacussu venom, complexed with stearic acid
Descriptor: BthTX-IIb, SODIUM ION, STEARIC ACID, ...
Authors:Borges, R.J, Fontes, M.R.M.
Deposit date:2021-07-21
Release date:2022-01-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:BthTX-II from Bothrops jararacussu venom has variants with different oligomeric assemblies: An example of snake venom phospholipases A 2 versatility.
Int.J.Biol.Macromol., 191, 2021
7RJZ
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BthTX-II variant a, from Bothrops jararacussu venom, complexed with benzoic acid
Descriptor: BENZOIC ACID, BthTX-IIa
Authors:Borges, R.J, Fontes, M.R.M.
Deposit date:2021-07-21
Release date:2022-01-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:BthTX-II from Bothrops jararacussu venom has variants with different oligomeric assemblies: An example of snake venom phospholipases A 2 versatility.
Int.J.Biol.Macromol., 191, 2021
4E4C
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BU of 4e4c by Molmil
Crystal structure of Notexin at 1.8 A resolution
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Phospholipase A2, SULFATE ION
Authors:Ullah, A, Spencer, P, Murakami, M.T, Arni, R.K.
Deposit date:2012-03-12
Release date:2012-03-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High resolution structure of Notexin
To be Published
4YU7
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Crystal structure of Piratoxin I (PrTX-I) complexed to caffeic acid
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog piratoxin-1, CAFFEIC ACID, ...
Authors:Fernandes, C.A.H, Fontes, M.R.M.
Deposit date:2015-03-18
Release date:2015-08-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.647 Å)
Cite:Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids.
Plos One, 10, 2015
4YV5
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BU of 4yv5 by Molmil
Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Basic phospholipase A2 homolog 2, ...
Authors:Salvador, G.H.M, Fontes, M.R.M.
Deposit date:2015-03-19
Release date:2015-10-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
6MQF
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Myotoxin II from Bothrops moojeni complexed with Acetylsalicylic acid
Descriptor: 2-(ACETYLOXY)BENZOIC ACID, Basic phospholipase A2 homolog 2, DIMETHYL SULFOXIDE
Authors:Salvador, G.H.M, Fontes, M.R.M.
Deposit date:2018-10-09
Release date:2019-03-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.693 Å)
Cite:Search for efficient inhibitors of myotoxic activity induced by ophidian phospholipase A2-like proteins using functional, structural and bioinformatics approaches.
Sci Rep, 9, 2019
6MQD
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Myotoxin II from Bothrops moojeni complexed with Rosmarinic Acid
Descriptor: (2R)-3-(3,4-dihydroxyphenyl)-2-{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}propanoic acid, Basic phospholipase A2 homolog 2
Authors:Salvador, G.H.M, Fontes, M.R.M.
Deposit date:2018-10-09
Release date:2019-03-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Search for efficient inhibitors of myotoxic activity induced by ophidian phospholipase A2-like proteins using functional, structural and bioinformatics approaches.
Sci Rep, 9, 2019

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