Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7SPN
DownloadVisualize
BU of 7spn by Molmil
Crystal structure of IS11, a thermophilic esterase
Descriptor: IS11
Authors:Stogios, P.J, Evdokimova, E, Khusnutdinova, A, Yakunin, A.F, Savchenko, A.
Deposit date:2021-11-02
Release date:2022-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Crystal structure of IS11, a thermophilic esterase
To Be Published
7TB7
DownloadVisualize
BU of 7tb7 by Molmil
Crystal structure of D179N KPC-2 beta-lactamase
Descriptor: CITRIC ACID, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:van den Akker, F, Alsenani, T.
Deposit date:2021-12-21
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Structural Characterization of the D179N and D179Y Variants of KPC-2 beta-Lactamase: Omega-Loop Destabilization as a Mechanism of Resistance to Ceftazidime-Avibactam.
Antimicrob.Agents Chemother., 66, 2022
7TBX
DownloadVisualize
BU of 7tbx by Molmil
Crystal structure of D179Y KPC-2 beta-lactamase
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC
Authors:van den Akker, F, Alsenani, T.
Deposit date:2021-12-22
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structural Characterization of the D179N and D179Y Variants of KPC-2 beta-Lactamase: Omega-Loop Destabilization as a Mechanism of Resistance to Ceftazidime-Avibactam.
Antimicrob.Agents Chemother., 66, 2022
7TC1
DownloadVisualize
BU of 7tc1 by Molmil
Crystal structure of D179N KPC-2 beta-lactamase in complex with vaborbactam
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, PHOSPHATE ION, Vaborbactam
Authors:van den Akker, F, Alsenani, T.
Deposit date:2021-12-22
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structural Characterization of the D179N and D179Y Variants of KPC-2 beta-Lactamase: Omega-Loop Destabilization as a Mechanism of Resistance to Ceftazidime-Avibactam.
Antimicrob.Agents Chemother., 66, 2022
7TI0
DownloadVisualize
BU of 7ti0 by Molmil
Structure of CTX-M-15 bound to RPX-7063 at 1.5A
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Clifton, M.C, Abendroth, J, Hecker, S.J, Edwards, T.E.
Deposit date:2022-01-12
Release date:2022-05-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Broad-spectrum cyclic boronate beta-lactamase inhibitors featuring an intramolecular prodrug for oral bioavailability.
Bioorg.Med.Chem., 62, 2022
7TI1
DownloadVisualize
BU of 7ti1 by Molmil
Structure of AmpC bound to RPX-7063 at 2.0A
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Clifton, M.C, Abendroth, J, Edwards, T.E, Hecker, S.J.
Deposit date:2022-01-12
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broad-spectrum cyclic boronate beta-lactamase inhibitors featuring an intramolecular prodrug for oral bioavailability.
Bioorg.Med.Chem., 62, 2022
7TI2
DownloadVisualize
BU of 7ti2 by Molmil
Structure of KPC-2 bound to RPX-7063 at 1.75A
Descriptor: 1,2-ETHANEDIOL, Carbapenem-hydrolyzing beta-lactamase KPC, {(3R,7S)-2-hydroxy-3-[2-(thiophen-2-yl)acetamido]-2,3,4,7-tetrahydro-1,2-oxaborepin-7-yl}acetic acid
Authors:Clifton, M.C, Fairman, J.W, Edwards, T.E, Hecker, S.J.
Deposit date:2022-01-12
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Broad-spectrum cyclic boronate beta-lactamase inhibitors featuring an intramolecular prodrug for oral bioavailability.
Bioorg.Med.Chem., 62, 2022
7TPU
DownloadVisualize
BU of 7tpu by Molmil
Crystal structure of a chitinase-modifying protein from Fusarium vanettenii (Fvan-cmp)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-lactamase domain-containing protein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Dowling, N.V, Naumann, T.A, Price, N.P.J, Rose, D.R.
Deposit date:2022-01-26
Release date:2023-02-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Crystal structure of a polyglycine hydrolase determined using a RoseTTAFold model.
Acta Crystallogr D Struct Biol, 79, 2023
7U1B
DownloadVisualize
BU of 7u1b by Molmil
Crystal structure of EstG in complex with tantalum cluster
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, Beta-lactamase domain-containing protein, ...
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2022-02-20
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:EstG is a novel esterase required for cell envelope integrity in Caulobacter.
Curr.Biol., 33, 2023
7U1C
DownloadVisualize
BU of 7u1c by Molmil
Structure of EstG crystalized with SO4 and Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase domain-containing protein, SODIUM ION, ...
Authors:Gabelli, S.B, Chen, Z.
Deposit date:2022-02-20
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:EstG is a novel esterase required for cell envelope integrity in Caulobacter.
Curr.Biol., 33, 2023
7U48
DownloadVisualize
BU of 7u48 by Molmil
Clavulanic acid-CTX-M-15
Descriptor: (E)-5-hydroxy-3-oxo-N-(3-oxopropylidene)-L-norvaline, Beta-lactamase, GLYCEROL, ...
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
7U49
DownloadVisualize
BU of 7u49 by Molmil
DFC-CTX-M-15
Descriptor: (2R,4S,5R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-(methoxyimino)acetyl]amino}-2-oxoethyl]-5-(sulfanylmethyl)-1,3-thiazinane-4-carboxylic acid, Beta-lactamase
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
7U4B
DownloadVisualize
BU of 7u4b by Molmil
Ampicillin-CTX-M-15
Descriptor: (2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
7U57
DownloadVisualize
BU of 7u57 by Molmil
apo-CTX-M-15
Descriptor: Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-03-01
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
7U6Q
DownloadVisualize
BU of 7u6q by Molmil
TEM-1 beta-lactamase
Descriptor: Beta-lactamase, SULFATE ION
Authors:Ji, Z, Boxer, S.G, Mathews, I.I.
Deposit date:2022-03-04
Release date:2022-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein Electric Fields Enable Faster and Longer-Lasting Covalent Inhibition of beta-Lactamases.
J.Am.Chem.Soc., 144, 2022
7U70
DownloadVisualize
BU of 7u70 by Molmil
Crystal Structure of CTX-M-14 with compound 2
Descriptor: 3-fluoro-N-[(1R,3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-inden-1-yl]benzamide, Beta-lactamase
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-07
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U8S
DownloadVisualize
BU of 7u8s by Molmil
Crystal Structure of KPC-2 with compound 2
Descriptor: 3-fluoro-N-[(1R,3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-inden-1-yl]benzamide, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-09
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7U9B
DownloadVisualize
BU of 7u9b by Molmil
Crystal structure of indoline 7 with KPC-2
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, [(3S)-3-(1H-tetrazol-5-yl)-2,3-dihydro-1H-indol-1-yl][3-(trifluoromethyl)phenyl]methanone
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-10
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7UA7
DownloadVisualize
BU of 7ua7 by Molmil
Crystal structure of indoline 9 with KPC-2
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, GLYCEROL, tert-butyl {(3R)-3-[(1H-tetrazol-5-yl)carbamoyl]-1-[3-(trifluoromethyl)benzoyl]-2,3-dihydro-1H-indol-3-yl}carbamate
Authors:Akhtar, A, Chen, Y.
Deposit date:2022-03-11
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.247 Å)
Cite:Probing the binding hot spots of KPC-2 carbapenemase using reversible tetrazole-based inhibitors
To Be Published
7UDA
DownloadVisualize
BU of 7uda by Molmil
Structure of the EstG
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase domain-containing protein, SODIUM ION
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2022-03-18
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:EstG is a novel esterase required for cell envelope integrity in Caulobacter.
Curr.Biol., 33, 2023
7UL6
DownloadVisualize
BU of 7ul6 by Molmil
CryoEM structure of full-length dimeric ClbP
Descriptor: Beta-lactamase
Authors:Velilla, J.A, Walsh Jr, R.M, Gaudet, R.
Deposit date:2022-04-04
Release date:2022-09-28
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
7ULW
DownloadVisualize
BU of 7ulw by Molmil
CryoEM structure of human LACTB filament
Descriptor: Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Bennett, J.A, Steward, L.R, Aydin, H.
Deposit date:2022-04-05
Release date:2022-12-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of the human LACTB filament reveals the mechanisms of assembly and membrane binding.
Plos Biol., 20, 2022
7UON
DownloadVisualize
BU of 7uon by Molmil
CTX-M-14 Y105W mutant
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Judge, A, Hu, L, Sankaran, B, Van Riper, J, Prasad, B.V.V, Palzkill, T.
Deposit date:2022-04-13
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M beta-lactamase.
Commun Biol, 6, 2023
7UTB
DownloadVisualize
BU of 7utb by Molmil
KPC-2 CARBAPENEMASE IN COMPLEX WITH THE BORONIC ACID INHIBITOR MB_076
Descriptor: Carbapenem-hydrolyzing beta-lactamase KPC, [(1~{R})-1-[2-[(5-azanyl-1,3,4-thiadiazol-2-yl)sulfanyl]ethanoylamino]-2-(4-carboxy-1,2,3-triazol-1-yl)ethyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron
Authors:van den Akker, F, Alsenani, T.A.
Deposit date:2022-04-26
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Boronic Acid Transition State Inhibitors as Potent Inactivators of KPC and CTX-M beta-Lactamases: Biochemical and Structural Analyses.
Antimicrob.Agents Chemother., 67, 2023
7V1Y
DownloadVisualize
BU of 7v1y by Molmil
Serine beta-lactamase-like protein LACTB in complex with inhibitor
Descriptor: ALA-ALA-B3S, Serine beta-lactamase-like protein LACTB, mitochondrial
Authors:Zhang, M.H, Yang, M.J.
Deposit date:2021-08-07
Release date:2022-02-16
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis for the catalytic activity of filamentous human serine beta-lactamase-like protein LACTB.
Structure, 30, 2022

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon