PDB: 98041 resultsInfo pagesStatus searchChemie searchBIRD

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1RG2	Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTA Descriptor: 4-(2R-AMINO-1-HYDROXYETHYL)PHENOL, 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL, 5'-D(*AP*GP*TP*A)-3', ... Authors: Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G. Deposit date: 2003-11-11 Release date: 2004-03-02 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes. J.Med.Chem., 47, 2004
3H0G	RNA Polymerase II from Schizosaccharomyces pombe Descriptor: DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Spahr, H, Calero, G, Bushnell, D.A, Kornberg, R.D. Deposit date: 2009-04-09 Release date: 2009-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.65 Å) Cite: Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution. Proc.Natl.Acad.Sci.USA, 106, 2009
1R6U	Crystal structure of an active fragment of human tryptophanyl-tRNA synthetase with cytokine activity Descriptor: GLYCEROL, TRYPTOPHANYL-5'AMP, Tryptophanyl-tRNA synthetase Authors: Yang, X.-L, Otero, F.J, Skene, R.J, McRee, D.E, Ribas de Pouplana, L, Schimmel, P. Deposit date: 2003-10-16 Release date: 2004-01-06 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Functional and crystal structure analysis of active site adaptations of a potent anti-angiogenic human tRNA synthetase Structure, 15, 2007
1AWD	FERREDOXIN [2FE-2S] OXIDIZED FORM FROM CHLORELLA FUSCA Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN Authors: Sheldrick, G.M. Deposit date: 1997-10-01 Release date: 1998-01-14 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystal structure determination at 1.4 A resolution of ferredoxin from the green alga Chlorella fusca Structure Fold.Des., 7, 1999
1UKH	Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125 Descriptor: 11-mer peptide from C-jun-amino-terminal kinase interacting protein 1, Mitogen-activated protein kinase 8 isoform 4 Authors: Heo, Y.-S, Kim, Y.K, Sung, B.-J, Lee, H.S, Lee, J.I, Seo, C.I, Park, S.-Y, Kim, J.H, Hyun, Y.-L, Jeon, Y.H, Ro, S, Lee, T.G, Cho, J.M, Hwang, K.Y, Yang, C.-H. Deposit date: 2003-08-23 Release date: 2004-08-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125 Embo J., 23, 2004
1ULZ	Crystal structure of the biotin carboxylase subunit of pyruvate carboxylase Descriptor: pyruvate carboxylase n-terminal domain Authors: Kondo, S, Nakajima, Y, Sugio, S, Yong-Biao, J, Sueda, S, Kondo, H. Deposit date: 2003-09-18 Release date: 2004-03-09 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure of the biotin carboxylase subunit of pyruvate carboxylase from Aquifex aeolicus at 2.2 A resolution. Acta Crystallogr.,Sect.D, 60, 2004
1UKI	Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125 Descriptor: 11-mer peptide from C-jun-amino-terminal kinase interacting protein 1, 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE, mitogen-activated protein kinase 8 isoform 4 Authors: Heo, Y.-S, Kim, Y.K, Sung, B.-J, Lee, H.S, Lee, J.I, Seo, C.I, Park, S.-Y, Kim, J.H, Hyun, Y.-L, Jeon, Y.H, Ro, S, Lee, T.G, Cho, J.M, Hwang, K.Y, Yang, C.-H. Deposit date: 2003-08-23 Release date: 2004-08-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125 Embo J., 23, 2004
3LZM	STRUCTURAL STUDIES OF MUTANTS OF T4 LYSOZYME THAT ALTER HYDROPHOBIC STABILIZATION Descriptor: T4 LYSOZYME Authors: Wilson, K, Faber, R, Dao-Pin, S, Matthews, B.W. Deposit date: 1989-05-01 Release date: 1990-01-15 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural studies of mutants of T4 lysozyme that alter hydrophobic stabilization. J.Biol.Chem., 264, 1989
1ROS	Crystal structure of MMP-12 complexed to 2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl-4-(4-ethoxy[1,1-biphenyl]-4-yl)-4-oxobutanoic acid Descriptor: 2-[2-(1,3-DIOXO-1,3-DIHYDRO-2H-ISOINDOL-2-YL)ETHYL]-4-(4'-ETHOXY-1,1'-BIPHENYL-4-YL)-4-OXOBUTANOIC ACID, CALCIUM ION, Macrophage metalloelastase, ... Authors: Morales, R, Perrier, S, Florent, J.M, Beltra, J, Dufour, S, De Mendez, I, Manceau, P, Tertre, A, Moreau, F, Compere, D, Dublanchet, A.C, O'Gara, M. Deposit date: 2003-12-02 Release date: 2004-12-07 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structures of novel non-peptidic, non-zinc chelating inhibitors bound to MMP-12. J.Mol.Biol., 341, 2004
1RGU	The crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTG Descriptor: 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL, 5'-D(*AP*GP*TP*G)-3', SPERMINE, ... Authors: Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G. Deposit date: 2003-11-13 Release date: 2004-03-02 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes. J.Med.Chem., 47, 2004
1IWD	Proposed Amino Acid Sequence and the 1.63 Angstrom X-ray Crystal Structure of a Plant Cysteine Protease Ervatamin B: Insight into the Structural Basis of its Stability and Substrate Specificity. Descriptor: ERVATAMIN B, THIOSULFATE Authors: Chakrabarti, C, Biswas, S, Dattagupta, J.K. Deposit date: 2002-05-02 Release date: 2003-05-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Proposed amino acid sequence and the 1.63 A X-ray crystal structure of a plant cysteine protease, ervatamin B: Some insights into the structural basis of its stability and substrate specificity Proteins, 51, 2003
1SIV	THREE-DIMENSIONAL STRUCTURE OF A SIV PROTEASE(SLASH)INHIBITOR COMPLEX. IMPLICATIONS FOR THE DESIGN OF HIV-1 AND HIV-2 PROTEASE INHIBITORS Descriptor: SIV PROTEASE, methyl N-{(4S,5S)-5-[(L-alanyl-L-alanyl)amino]-4-hydroxy-6-phenylhexanoyl}-L-valyl-L-valinate Authors: Zhao, B, Abdel-Meguid, S. Deposit date: 1993-08-24 Release date: 1994-01-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Three-dimensional structure of a simian immunodeficiency virus protease/inhibitor complex. Implications for the design of human immunodeficiency virus type 1 and 2 protease inhibitors. Biochemistry, 32, 1993
1XMW	CD3 EPSILON AND DELTA ECTODOMAIN FRAGMENT COMPLEX IN SINGLE-CHAIN CONSTRUCT Descriptor: Chimeric CD3 mouse Epsilon and sheep Delta Ectodomain Fragment Complex Authors: Sun, Z.-Y.J, Kim, S.T, Kim, I.C, Fahmy, A, Reinherz, E.L, Wagner, G. Deposit date: 2004-10-04 Release date: 2004-11-30 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Solution structure of the CD3epsilondelta ectodomain and comparison with CD3epsilongamma as a basis for modeling T cell receptor topology and signaling. Proc.Natl.Acad.Sci.Usa, 101, 2004
1S5O	Structural and Mutational Characterization of L-carnitine Binding to Human carnitine Acetyltransferase Descriptor: CARNITINE, carnitine acetyltransferase isoform 2 Authors: Govindasamy, L, Kukar, T, Lian, W, Pedersen, B, Gu, Y, Agbandje-Mckenna, M, Jin, S, Mckenna, R, Wu, D. Deposit date: 2004-01-21 Release date: 2004-02-03 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural and mutational characterization of l-carnitine binding to human carnitine acetyltransferase. J.Struct.Biol., 146, 2004
1WMA	Crystal structure of human CBR1 in complex with Hydroxy-PP Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3-(4-AMINO-1-TERT-BUTYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-3-YL)PHENOL, ... Authors: Rauh, D, Bateman, R, Shokat, K.M. Deposit date: 2004-07-06 Release date: 2005-04-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.24 Å) Cite: An unbiased cell morphology-based screen for new, biologically active small molecules Plos Biol., 3, 2005
1DST	MUTANT OF FACTOR D WITH ENHANCED CATALYTIC ACTIVITY Descriptor: FACTOR D Authors: Narayana, S.V.L, Volanakis, J.E. Deposit date: 1995-09-13 Release date: 1996-07-11 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of a complement factor D mutant expressing enhanced catalytic activity. J.Biol.Chem., 270, 1995
2L3Y	Solution structure of mouse IL-6 Descriptor: Interleukin-6 Authors: Veverka, V, Redpath, N.T, Carrington, B, Muskett, F.W, Taylor, R.J, Henry, A.J, Carr, M.D. Deposit date: 2010-09-25 Release date: 2011-09-28 Last modified: 2013-01-02 Method: SOLUTION NMR Cite: Conservation of functional sites on interleukin-6 and implications for evolution of signaling complex assembly and therapeutic intervention. J.Biol.Chem., 287, 2012
2LWP	The NMR solution structure of the the ubiquitin homology domain of mouse BAG-1 Descriptor: BAG family molecular chaperone regulator 1 Authors: Huang, H, Yu, C. Deposit date: 2012-08-05 Release date: 2013-06-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The NMR solution structure of the ubiquitin homology domain of Bcl-2-associated athanogene 1 (BAG-1-UBH) from Mus musculus. Biochem.Biophys.Res.Commun., 431, 2013
2BBQ	STRUCTURAL BASIS FOR RECOGNITION OF POLYGLUTAMYL FOLATES BY THYMIDYLATE SYNTHASE Descriptor: 10-PARPARGYL-5,8-DIDEAZAFOLATE-4-GLUTAMIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE Authors: Kamb, A, Finer-Moore, J, Stroud, R.M. Deposit date: 1992-09-16 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for recognition of polyglutamyl folates by thymidylate synthase. Biochemistry, 31, 1992
1ESO	MONOMERIC CU,ZN SUPEROXIDE DISMUTASE FROM ESCHERICHIA COLI Descriptor: COPPER (II) ION, CU, ZN SUPEROXIDE DISMUTASE, ... Authors: Pesce, A, Capasso, C, Battistoni, A, Folcarelli, S, Rotilio, G, Desideri, A, Bolognesi, M. Deposit date: 1997-06-27 Release date: 1998-07-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: Unique structural features of the monomeric Cu,Zn superoxide dismutase from Escherichia coli, revealed by X-ray crystallography. J.Mol.Biol., 274, 1997
2LSK	C-terminal domain of human REV1 in complex with DNA-polymerase H (eta) Descriptor: DNA polymerase eta, DNA repair protein REV1 Authors: Pozhidaeva, A, Pustovalova, Y, Bezsonova, I, Korzhnev, D. Deposit date: 2012-05-01 Release date: 2012-06-27 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR structure and dynamics of the C-terminal domain from human Rev1 and its complex with Rev1 interacting region of DNA polymerase eta. Biochemistry, 51, 2012
2KG0	Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA Descriptor: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F Authors: Allain, F.H.T, Dominguez, C. Deposit date: 2009-03-02 Release date: 2010-06-09 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2KFY	NMR structure of the first qRRM of hnRNP F in complex with AGGGAU G-tract RNA Descriptor: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F Authors: Allain, F.H.T, Dominguez, C. Deposit date: 2009-03-02 Release date: 2010-06-09 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs. Nat.Struct.Mol.Biol., 17, 2010
2JJJ	Endothiapepsin in complex with a gem-diol inhibitor. Descriptor: ENDOTHIAPEPSIN, N~2~-[(2R)-2-benzyl-3-(tert-butylsulfonyl)propanoyl]-N-{(1R)-1-(cyclohexylmethyl)-3,3-difluoro-2,2-dihydroxy-4-[(2-morpholin-4-ylethyl)amino]-4-oxobutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide, SULFATE ION Authors: Coates, L, Tuan, H.-F, Tomanicek, S.J, Kovalevsky, A, Mustyakimov, M, Erskine, P, Cooper, J. Deposit date: 2008-04-09 Release date: 2008-05-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1 Å) Cite: The Catalytic Mechanism of an Aspartic Proteinase Explored with Neutron and X-Ray Diffraction J.Am.Chem.Soc., 130, 2008
2JJI	Endothiapepsin in complex with a gem-diol inhibitor. Descriptor: ENDOTHIAPEPSIN, N~2~-[(2R)-2-benzyl-3-(tert-butylsulfonyl)propanoyl]-N-{(1R)-1-(cyclohexylmethyl)-3,3-difluoro-2,2-dihydroxy-4-[(2-morpholin-4-ylethyl)amino]-4-oxobutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide, SULFATE ION Authors: Coates, L, Tuan, H.-F, Tomanicek, S.J, Kovalevsky, A, Mustyakimov, M, Erskine, P, Cooper, J. Deposit date: 2008-04-09 Release date: 2008-05-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.57 Å) Cite: The Catalytic Mechanism of an Aspartic Proteinase Explored with Neutron and X-Ray Diffraction J.Am.Chem.Soc., 130, 2008

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