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3I7S
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BU of 3i7s by Molmil
Dihydrodipicolinate synthase mutant - K161A - with the substrate pyruvate bound in the active site.
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P.
Deposit date:2009-07-08
Release date:2010-04-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase?
Biochimie, 92, 2010
5HWJ
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BU of 5hwj by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase
Descriptor: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2016-01-29
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
6RAB
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BU of 6rab by Molmil
Ruminococcus gnavus sialic acid aldolase Wild Type
Descriptor: Putative N-acetylneuraminate lyase
Authors:Owen, C.D, Bell, A, Juge, N, Walsh, M.A.
Deposit date:2019-04-05
Release date:2019-09-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut.
Nat Microbiol, 4, 2019
6RD1
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BU of 6rd1 by Molmil
Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant in complex with sialic acid
Descriptor: 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, Putative N-acetylneuraminate lyase
Authors:Owen, C.D, Bell, A, Juge, N, Walsh, M.A.
Deposit date:2019-04-12
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut.
Nat Microbiol, 4, 2019
6RB7
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BU of 6rb7 by Molmil
Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Owen, C.D, Bell, A, Juge, N, Walsh, M.A.
Deposit date:2019-04-09
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut.
Nat Microbiol, 4, 2019
5F1V
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BU of 5f1v by Molmil
biomimetic design results in a potent allosteric inhibitor of dihydrodipicolinate synthase from Campylobacter jejuni
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Conly, C.J.T, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2015-11-30
Release date:2016-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biomimetic Design Results in a Potent Allosteric Inhibitor of Dihydrodipicolinate Synthase from Campylobacter jejuni.
J.Am.Chem.Soc., 138, 2016
5F1U
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BU of 5f1u by Molmil
biomimetic design results in a potent allosteric inhibitor of dihydrodipicolinate synthase from Campylobacter jejuni
Descriptor: (2R,5R)-2,5-diamino-2,5-bis(4-aminobutyl)hexanedioic acid, 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ...
Authors:Conly, C.J.T, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2015-11-30
Release date:2016-02-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Biomimetic Design Results in a Potent Allosteric Inhibitor of Dihydrodipicolinate Synthase from Campylobacter jejuni.
J.Am.Chem.Soc., 138, 2016
5HWN
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BU of 5hwn by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate
Descriptor: FORMIC ACID, GLYCEROL, PYRUVIC ACID, ...
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2016-01-29
Release date:2016-03-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
8U91
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BU of 8u91 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (Apo, Orthorhombic P form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, N-acetylneuraminate lyase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (Apo, Orthorhombic P form)
To be published
8U92
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BU of 8u92 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound, Orthorhombic P form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound, Orthorhombic P form)
To be published
8U90
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BU of 8u90 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (Apo, hexagonal form)
Descriptor: CHLORIDE ION, GLYCEROL, IODIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (Apo, hexagonal form)
To be published
8U93
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BU of 8u93 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (PEG bound)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (PEG bound)
To be published
8U8W
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BU of 8u8w by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate and halides bound)
Descriptor: CHLORIDE ION, GLYCEROL, IODIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate and halides bound)
To be published
6UE0
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BU of 6ue0 by Molmil
Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION
Authors:Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P.
Deposit date:2019-09-20
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens.
Febs Lett., 594, 2020
3HIJ
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BU of 3hij by Molmil
Crystal structure of dihydrodipicolinate synthase from Bacillus anthracis in complex with its substrate, pyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, SODIUM ION
Authors:Voss, J.E, Scally, S.W, Dobson, R.C.J, Perugini, M.A.
Deposit date:2009-05-20
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Substrate-mediated Stabilization of a Tetrameric Drug Target Reveals Achilles Heel in Anthrax.
J.Biol.Chem., 285, 2010
2YXG
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BU of 2yxg by Molmil
Crystal structure of Dihyrodipicolinate Synthase (dapA)
Descriptor: Dihydrodipicolinate synthase
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-26
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of dihydrodipicolinate synthase from Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 65, 2009
4AHQ
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BU of 4ahq by Molmil
Crystal Structure of N-acetylneuraminic acid lyase mutant K165C from Staphylococcus aureus
Descriptor: N-ACETYLNEURAMINATE LYASE
Authors:Timms, N, Polyakova, A, Windle, C.L, Trinh, C.H, Nelson, A, Trinh, A.R, Berry, A.
Deposit date:2012-02-06
Release date:2013-01-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights Into the Recovery of Aldolase Activity in N-Acetylneuraminic Acid Lyase by Replacement of the Catalytically Active Lysine with Gamma-Thialysine by Using a Chemical Mutagenesis Strategy.
Chembiochem, 14, 2013
2XFW
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BU of 2xfw by Molmil
Structure of the E192N mutant of E. coli N-acetylneuraminic acid lyase in complex with pyruvate in crystal form III
Descriptor: N-ACETYLNEURAMINIC ACID LYASE, PENTAETHYLENE GLYCOL, PYRUVIC ACID
Authors:Campeotto, I, Murshudov, G.N, Bolt, A.H, Trinh, C.H, Phillips, S.E.V, Nelson, A, Pearson, A.R, Berry, A.
Deposit date:2010-05-28
Release date:2010-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Insights Into Substrate Specificity in Variants of N-Acetylneuraminic Acid Lyase Produced by Directed Evolution.
To be Published
4AHO
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BU of 4aho by Molmil
Crystal Structure of N-acetylneuraminic acid lyase from Staphylococcus aureus with the chemical modification thia-lysine at position 165
Descriptor: CHLORIDE ION, N-ACETYLNEURAMINATE LYASE
Authors:Timms, N, Polyakova, A, Windle, C.L, Trinh, C.H, Nelson, A, Trinh, A.R, Berry, A.
Deposit date:2012-02-06
Release date:2013-01-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights Into the Recovery of Aldolase Activity in N-Acetylneuraminic Acid Lyase by Replacement of the Catalytically Active Lysine with Gamma-Thialysine by Using a Chemical Mutagenesis Strategy.
Chembiochem, 14, 2013
4AMA
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BU of 4ama by Molmil
Crystal Structure of N-acetylneuraminic acid lyase from Staphylococcus aureus with the chemical modification thia-lysine at position 165 in complex with pyruvate
Descriptor: N-ACETYLNEURAMINATE LYASE
Authors:Timms, N, Polyakova, A, Windle, C.L, Trinh, C.H, Nelson, A, Pearson, A.R, Berry, A.
Deposit date:2012-03-08
Release date:2013-01-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into the recovery of aldolase activity in N-acetylneuraminic acid lyase by replacement of the catalytically active lysine with gamma-thialysine by using a chemical mutagenesis strategy.
Chembiochem, 14, 2013
4BWL
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BU of 4bwl by Molmil
Structure of the Y137A mutant of E. coli N-acetylneuraminic acid lyase in complex with pyruvate, N-acetyl-D-mannosamine and N- acetylneuraminic acid
Descriptor: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, N-ACETYLNEURAMINATE LYASE, ...
Authors:Campeotto, I, Phillips, S.E.V, Pearson, A.R, Nelson, A, Berry, A.
Deposit date:2013-07-03
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Reaction Mechanism of N-Acetylneuraminic Acid Lyase Revealed by a Combination of Crystallography, Qm/Mm Simulation and Mutagenesis.
Acs Chem.Biol., 9, 2014
4AHP
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BU of 4ahp by Molmil
Crystal Structure of Wild Type N-acetylneuraminic acid lyase from Staphylococcus aureus
Descriptor: CHLORIDE ION, N-ACETYLNEURAMINATE LYASE
Authors:Timms, N, Polyakova, A, Windle, C.L, Trinh, C.H, Nelson, A, Trinh, A.R, Berry, A.
Deposit date:2012-02-06
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights Into the Recovery of Aldolase Activity in N-Acetylneuraminic Acid Lyase by Replacement of the Catalytically Active Lysine with Gamma-Thialysine by Using a Chemical Mutagenesis Strategy.
Chembiochem, 14, 2013
2OJP
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BU of 2ojp by Molmil
The crystal structure of a dimeric mutant of Dihydrodipicolinate synthase from E.coli- DHDPS-L197Y
Descriptor: Dihydrodipicolinate synthase, GLYCEROL
Authors:Griffin, M.D.W, Dobson, R.C.J, Antonio, L, Perugini, M.A, Jameson, G.B, Gerrard, J.A.
Deposit date:2007-01-13
Release date:2008-01-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolution of quaternary structure in a homotetrameric enzyme.
J.Mol.Biol., 380, 2008
2YDA
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BU of 2yda by Molmil
Sulfolobus sulfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F, A198F variant
Descriptor: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Crennell, S.J, Royer, S.F, Angelopoulou, M, Hough, D.W, Danson, M.J, Bull, S.D.
Deposit date:2011-03-18
Release date:2012-03-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Sulfolobus Sulfataricus 2-Keto-3-Deoxygluconate Aldolase
To be Published
2NUW
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BU of 2nuw by Molmil
2-keto-3-deoxygluconate aldolase from Sulfolobus acidocaldarius, native structure at 1.8 A resolution
Descriptor: 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase, MAGNESIUM ION
Authors:van Eerde, A, Dijkstra, B.W.
Deposit date:2006-11-10
Release date:2007-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical and structural exploration of the catalytic capacity of Sulfolobus KDG aldolases
Biochem.J., 403, 2007

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数据于2024-10-09公开中

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