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5LXV
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BU of 5lxv by Molmil
Crystal structure of Ruminococcus flavefaciens scaffoldin C cohesin in complex with a dockerin from an uncharacterized CBM-containing protein
Descriptor: CALCIUM ION, Carbohydrate-binding protein WP_009985128, Scaffoldin C
Authors:Najmudin, S, Bule, P, Fontes, C.M.G.A.
Deposit date:2016-09-22
Release date:2016-10-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Single Binding Mode Integration of Hemicellulose-degrading Enzymes via Adaptor Scaffoldins in Ruminococcus flavefaciens Cellulosome.
J. Biol. Chem., 291, 2016
4RIV
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BU of 4riv by Molmil
A Carbonic Anhydrase IX Mimic in Complex with Saccharin
Descriptor: 1,2-BENZISOTHIAZOL-3(2H)-ONE 1,1-DIOXIDE, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Mahon, B.P, McKenna, R.
Deposit date:2014-10-07
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Saccharin: A lead compound for structure-based drug design of carbonic anhydrase IX inhibitors.
Bioorg.Med.Chem., 23, 2015
5LZY
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BU of 5lzy by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
7TNH
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BU of 7tnh by Molmil
Crystal structure of CSF1R kinase domain in complex with DP-6233
Descriptor: 2,2-dimethyl-N-[(6-methyl-5-{[2-(1-methyl-1H-pyrazol-4-yl)pyridin-4-yl]oxy}pyridin-2-yl)carbamoyl]propanamide, CHLORIDE ION, Macrophage colony-stimulating factor 1 receptor,Fibroblast growth factor receptor 1 chimera, ...
Authors:Edwards, T.E, Arakaki, T.L, Chun, L, Flynn, D.L.
Deposit date:2022-01-21
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of acyl ureas as highly selective small molecule CSF1R kinase inhibitors.
Bioorg.Med.Chem.Lett., 74, 2022
8TFF
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BU of 8tff by Molmil
PorX with BeF3 phosphate analog
Descriptor: ACETATE ION, BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, ...
Authors:Saran, A, Zeytuni, N.
Deposit date:2023-07-11
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:PorX with BeF3 phosphate analog
To Be Published
8TM0
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BU of 8tm0 by Molmil
Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class I polypeptide-related sequence A, ...
Authors:Rupert, P.B, Strong, R.
Deposit date:2023-07-27
Release date:2024-04-17
Method:X-RAY DIFFRACTION (3.83 Å)
Cite:Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
6FRD
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BU of 6frd by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-637
Descriptor: 1-cycloheptyl-3-{4-methoxy-3-[(2-methoxyphenyl)methoxy]phenyl}-4,4-dimethyl-4,5-dihydro- 1H-pyrazol-5-one, FORMIC ACID, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-02-15
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-637
To be published
6IPA
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BU of 6ipa by Molmil
C-terminal EMAP II-like domain of p43 refined against twinned data
Descriptor: aminoacyl-tRNA synthetase-interacting multifunctional protein p43
Authors:Manickam, Y, Harlos, K, Gupta, S, Sharma, A.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structures of the two domains that constitute the Plasmodium vivax p43 protein.
Acta Crystallogr D Struct Biol, 76, 2020
3ADB
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BU of 3adb by Molmil
Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 1)
Descriptor: L-seryl-tRNA(Sec) kinase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Itoh, Y, Chiba, S, Sekine, S, Yokoyama, S.
Deposit date:2010-01-18
Release date:2010-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for the Major Role of O-Phosphoseryl-tRNA Kinase in the UGA-Specific Encoding of Selenocysteine
Mol.Cell, 39, 2010
6IEM
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BU of 6iem by Molmil
Argininosuccinate lyase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15-PENTAOXAHEPTADECANE, Argininosuccinate lyase, ...
Authors:Paul, A, Mishra, A, Surolia, A, Vijayan, M.
Deposit date:2018-09-14
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies on M. tuberculosis argininosuccinate lyase and its liganded complex: Insights into catalytic mechanism.
IUBMB Life, 71, 2019
6IPW
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BU of 6ipw by Molmil
Crystal structure of CqsB2 from Streptomyces exfoliatus in complex with the product, 1-(2-hydroxypropyl)-2-methyl-carbazole-3,4-dione
Descriptor: 2-methyl-1-[(2R)-2-oxidanylpropyl]-9H-carbazole-3,4-dione, CqsB2
Authors:Tomita, T, Kobayashi, M, Nishiyama, M, Kuzuyama, T.
Deposit date:2018-11-05
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An Unprecedented Cyclization Mechanism in the Biosynthesis of Carbazole Alkaloids in Streptomyces.
Angew.Chem.Int.Ed.Engl., 58, 2019
8TEF
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BU of 8tef by Molmil
PorX primitive monoclinic crystal form
Descriptor: MAGNESIUM ION, Response regulator receiver protein, SULFATE ION
Authors:Saran, A, Zeytuni, N.
Deposit date:2023-07-06
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:PorX primitive monoclinic crystal form
To Be Published
8TLZ
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BU of 8tlz by Molmil
Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
Descriptor: (2S)-2-hydroxybutanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Rupert, P.B, Strong, R.
Deposit date:2023-07-27
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
8T28
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BU of 8t28 by Molmil
The crystal structure of SrtC2 sortase from Actinomyces oris
Descriptor: CHLORIDE ION, Class C sortase, PHOSPHATE ION
Authors:Osipiuk, J, Chang, C, Ton-That, H.L, Ton-That, H, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-06-05
Release date:2024-04-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase.
J.Biol.Chem., 300, 2024
8THP
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BU of 8thp by Molmil
PorX phosphatase null mutant (T271V)
Descriptor: CALCIUM ION, GLYCEROL, Response regulator receiver protein
Authors:Saran, A, Zeytuni, N.
Deposit date:2023-07-17
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:PorX phosphatase null mutant (T271V)
To Be Published
8TM2
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BU of 8tm2 by Molmil
Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Rupert, P.B, Strong, R.
Deposit date:2023-07-27
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
8TV6
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BU of 8tv6 by Molmil
SARS-CoV-2 Mac1 in complex with MDOLL-0169
Descriptor: (1R,6R)-6-{[3-(methoxycarbonyl)-5,6,7,8-tetrahydro-4H-cyclohepta[b]thiophen-2-yl]carbamoyl}cyclohex-3-ene-1-carboxylic acid, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Wazir, S, Maksimainen, M, Lehtio, L.
Deposit date:2023-08-17
Release date:2024-04-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Discovery of 2-Amide-3-methylester Thiophenes that Target SARS-CoV-2 Mac1 and Repress Coronavirus Replication, Validating Mac1 as an Antiviral Target.
J.Med.Chem., 67, 2024
1FJ3
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BU of 1fj3 by Molmil
THERMOLYSIN (50% ACETONE SOAKED)
Descriptor: ACETONE, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:English, A.C, Groom, C.R, Hubbard, R.E.
Deposit date:2000-08-07
Release date:2001-04-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Experimental and computational mapping of the binding surface of a crystalline protein.
Protein Eng., 14, 2001
5LEZ
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BU of 5lez by Molmil
Human 20S proteasome complex with Oprozomib in Mg-Acetate at 2.2 Angstrom
Descriptor: ACETATE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
Deposit date:2016-06-30
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
8TRY
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BU of 8try by Molmil
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor X20348
Descriptor: N-{(2S,3S)-4-[3-(dimethylamino)-1,2,4-oxadiazol-5-yl]-3-hydroxy-1-phenylbutan-2-yl}-4-(2-methylbutan-2-yl)benzene-1-sulfonamide, Polyketide synthase Pks13, SULFATE ION
Authors:Krieger, I.V, Sacchettini, J.C.
Deposit date:2023-08-10
Release date:2024-04-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Inhibitors of the Thioesterase Activity of Mycobacterium tuberculosis Pks13 Discovered Using DNA-Encoded Chemical Library Screening.
Acs Infect Dis., 10, 2024
1FR8
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BU of 1fr8 by Molmil
CRYSTAL STRUCTURE OF THE BOVINE BETA 1,4 GALACTOSYLTRANSFERASE (B4GALT1) CATALYTIC DOMAIN COMPLEXED WITH URIDINE DIPHOSPHOGALACTOSE
Descriptor: BETA 1,4 GALACTOSYLTRANSFERASE, GALACTOSE-URIDINE-5'-DIPHOSPHATE
Authors:Gastinel, L.N, Cambillau, C, Bourne, Y.
Deposit date:2000-09-07
Release date:2000-09-20
Last modified:2021-07-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the bovine beta4galactosyltransferase catalytic domain and its complex with uridine diphosphogalactose.
EMBO J., 18, 1999
8TR4
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BU of 8tr4 by Molmil
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor X20404
Descriptor: 4-(2-{(4M)-4-[(6M)-6-(2,5-dimethoxyphenyl)pyridin-3-yl]-1H-1,2,3-triazol-1-yl}ethyl)-N,N-dimethylbenzamide, Polyketide synthase Pks13, SULFATE ION
Authors:Krieger, I.V, Sacchettini, J.C.
Deposit date:2023-08-09
Release date:2024-04-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibitors of the Thioesterase Activity of Mycobacterium tuberculosis Pks13 Discovered Using DNA-Encoded Chemical Library Screening.
Acs Infect Dis., 10, 2024
6HKZ
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BU of 6hkz by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a inhibitor RNA 2-49-1
Descriptor: (2~{S})-2-[[(2~{S})-6-[2-[(6-fluoranylpyridin-3-yl)carbonylamino]ethyl-phenyl-amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Motlova, L, Novakova, Z, Barinka, C.
Deposit date:2018-09-09
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:2-Aminoadipic Acid-C(O)-Glutamate Based Prostate-Specific Membrane Antigen Ligands for Potential Use as Theranostics.
ACS Med Chem Lett, 9, 2018
8T41
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BU of 8t41 by Molmil
Crystal structure of aminopeptidase N from Mycobacterium tuberculosis
Descriptor: Aminopeptidase N, MAGNESIUM ION, ZINC ION
Authors:Park, H.W, Moss, D.L, Landry, S.J.
Deposit date:2023-06-08
Release date:2024-04-17
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of aminopeptidase N from Mycobacterium tuberculosis
To Be Published
7TY3
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BU of 7ty3 by Molmil
Crystal Structure of SETD2 Bound to an Indole-based Inhibitor
Descriptor: 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETD2, N-[(1R,3R)-3-(4-acetylpiperazin-1-yl)cyclohexyl]-4-fluoro-7-methyl-1H-indole-2-carboxamide, ...
Authors:Farrow, N.A.
Deposit date:2022-02-11
Release date:2022-08-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational-Design-Driven Discovery of EZM0414: A Selective, Potent SETD2 Inhibitor for Clinical Studies.
Acs Med.Chem.Lett., 13, 2022

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