PDB: 10938 件ウェブページステータス検索Chemie searchBIRD

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3K24	Crystal structure of mature apo-Cathepsin L C25A mutant in complex with Gln-Leu-Ala peptide 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-6)-beta-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin L1, ... 著者 Adams-Cioaba, M.A, Krupa, J.C, Mort, J.S, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2009-09-29 公開日 2010-03-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the recognition and cleavage of histone H3 by cathepsin L. Nat Commun, 2, 2011
2V83	Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide 分子名称: HISTONE H3, VDJ RECOMBINATION-ACTIVATING PROTEIN 2, ZINC ION 著者 Ramon-Maiques, S, Yang, W. 登録日 2007-08-02 公開日 2007-12-11 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Plant Homeodomain Finger of Rag2 Recognizes Histone H3 Methylated at Both Lysine-4 and Arginine-2. Proc.Natl.Acad.Sci.USA, 104, 2007
4I0K	Crystal structure of murine B7-H3 extracellular domain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD276 antigen, SULFATE ION, ... 著者 Vigdorovich, V, Ramagopal, U, Bonanno, J.B, Toro, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN) 登録日 2012-11-16 公開日 2012-12-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.97 Å) 主引用文献 Structure and T cell inhibition properties of B7 family member, B7-H3. Structure, 21, 2013
3AVR	Catalytic fragment of UTX/KDM6A bound with histone H3K27me3 peptide, N-oxyalylglycine, and Ni(II) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Histone H3, ... 著者 Sengoku, T, Yokoyama, S. 登録日 2011-03-07 公開日 2011-10-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.803 Å) 主引用文献 Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A Genes Dev., 25, 2011
2H68	Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex 分子名称: WD-repeat protein 5 著者 Ruthenburg, A.J, Wang, W.-K, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L. 登録日 2006-05-30 公開日 2006-07-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex. Nat.Struct.Mol.Biol., 13, 2006
2RVN	Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed with H3K9me3 peptide 分子名称: 18-mer peptide of Histone H3, Chromobox protein homolog 5 著者 Kawaguchi, A, Nishimura, Y. 登録日 2015-12-18 公開日 2016-03-16 実験手法 SOLUTION NMR 主引用文献 Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail Sci Rep, 6, 2016
6JM9	cryo-EM structure of DOT1L bound to unmodified nucleosome 分子名称: DNA strand I, DNA strand J, Histone H2A, ... 著者 Jang, S, Song, J.J. 登録日 2019-03-07 公開日 2019-05-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Structural basis of recognition and destabilization of the histone H2B ubiquitinated nucleosome by the DOT1L histone H3 Lys79 methyltransferase. Genes Dev., 33, 2019
6JMA	cryo-EM structure of DOT1L bound to H2B ubiquitinated nucleosome 分子名称: DNA I&J, Histone H2A, Histone H2B 1.1, ... 著者 Jang, S, Song, J.J. 登録日 2019-03-07 公開日 2019-05-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (6.8 Å) 主引用文献 Structural basis of recognition and destabilization of the histone H2B ubiquitinated nucleosome by the DOT1L histone H3 Lys79 methyltransferase. Genes Dev., 33, 2019
2L75	Solution structure of CHD4-PHD2 in complex with H3K9me3 分子名称: 14-meric peptide from 1Histone H3.1, Chromodomain-helicase-DNA-binding protein 4, ZINC ION 著者 Mansfield, R.E, Kwan, A.H, Mackay, J.P. 登録日 2010-12-02 公開日 2011-01-19 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Plant Homeodomain (PHD) Fingers of CHD4 Are Histone H3-binding Modules with Preference for Unmodified H3K4 and Methylated H3K9 J.Biol.Chem., 286, 2011
2LGK	NMR Structure of UHRF1 PHD domains in a complex with histone H3 peptide 分子名称: E3 ubiquitin-protein ligase UHRF1, ZINC ION, histone H3 peptide 著者 Wang, C, Shen, J, Yang, Z, Chen, P, Zhao, B, Hu, W, Lan, W, Tong, X, Wu, H, Li, G, Cao, C. 登録日 2011-07-28 公開日 2011-09-28 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Structural basis for site-specific reading of unmodified R2 of histone H3 tail by UHRF1 PHD finger. Cell Res., 21, 2011
2V89	Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide at 1.1A resolution 分子名称: HISTONE H3, VDJ RECOMBINATION-ACTIVATING PROTEIN 2, ZINC ION 著者 Ramon-Maiques, S, Yang, W. 登録日 2007-08-03 公開日 2007-12-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Rag2 Phd Finger Couples Histone H3 Lysine 4 Trimethylation with V(D)J Recombination. Nature, 450, 2007
3G7L	Chromodomain of Chp1 in complex with Histone H3K9me3 peptide 分子名称: ACETIC ACID, Chromo domain-containing protein 1, Histone H3.1/H3.2, ... 著者 Schalch, T, Joshua-Tor, L. 登録日 2009-02-10 公開日 2009-04-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin Mol.Cell, 34, 2009
5CMA	Anti-B7-H3 monoclonal antibody ch8H9 Fab fragment 分子名称: Antibody ch8H9 Fab heavy chain, Antibody ch8H9 Fab light chain 著者 Ahmed, M, Goldgur, Y, Cheng, M, Cheung, N.K. 登録日 2015-07-16 公開日 2015-10-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Humanized Affinity-matured Monoclonal Antibody 8H9 Has Potent Antitumor Activity and Binds to FG Loop of Tumor Antigen B7-H3. J.Biol.Chem., 290, 2015
2LGG	Structure of PHD domain of UHRF1 in complex with H3 peptide 分子名称: E3 ubiquitin-protein ligase UHRF1, ZINC ION, histone H3 peptide 著者 Wang, C, Shen, J, Yang, Z, Chen, P, Zhao, B, Hu, W, Lan, W, Tong, X, Wu, H, Li, G, Cao, C. 登録日 2011-07-26 公開日 2011-09-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for site-specific reading of unmodified R2 of histone H3 tail by UHRF1 PHD finger. Cell Res., 21, 2011
4GY5	Crystal structure of the tandem tudor domain and plant homeodomain of UHRF1 with Histone H3K9me3 分子名称: E3 ubiquitin-protein ligase UHRF1, Peptide from Histone H3.3, ZINC ION 著者 Cheng, J, Yang, Y, Fang, J, Xiao, J, Zhu, T, Chen, F, Wang, P, Xu, Y. 登録日 2012-09-05 公開日 2012-11-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.956 Å) 主引用文献 Structural insight into coordinated recognition of trimethylated histone H3 lysine 9 (H3K9me3) by the plant homeodomain (PHD) and tandem tudor domain (TTD) of UHRF1 (ubiquitin-like, containing PHD and RING finger domains, 1) protein J.Biol.Chem., 288, 2013
3RJ2	Structural and functional characterization of a novel histone H3 binding protein ORF158L from the Singapore grouper iridovirus (SGIV) 分子名称: Putative uncharacterized protein 著者 Chen, L, Liu, Y, Sivaraman, J, Hew, C.L. 登録日 2011-04-15 公開日 2012-02-29 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Novel histone H3 binding protein ORF158L from the Singapore grouper iridovirus J.Virol., 85, 2011
5VNB	YEATS in complex with histone H3 分子名称: 1,2-ETHANEDIOL, H3K23acK27ac peptide, SULFATE ION, ... 著者 Cho, H.J, Cierpicki, T. 登録日 2017-04-29 公開日 2018-09-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 GAS41 Recognizes Diacetylated Histone H3 through a Bivalent Binding Mode. ACS Chem. Biol., 13, 2018
4H75	Crystal structure of human Spindlin1 in complex with a histone H3K4(me3) peptide 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Histone H3, ... 著者 Yang, N, Wang, W, Wang, Y, Wang, M, Zhao, Q, Rao, Z, Zhu, B, Xu, R.M. 登録日 2012-09-20 公開日 2012-10-03 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.098 Å) 主引用文献 Distinct mode of methylated lysine-4 of histone H3 recognition by tandem tudor-like domains of Spindlin1. Proc.Natl.Acad.Sci.USA, 109, 2012
4IGO	Histone H3 Lysine 4 Demethylating rice Rice JMJ703 in complex with alpha-KG 分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, Os05g0196500 protein 著者 Chen, Q.F, Chen, X.S, Wang, Q, Zhang, F.B, Lou, Z.Y, Zhang, Q.F, Zhou, D.X. 登録日 2012-12-17 公開日 2013-04-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis of a histone H3 lysine 4 demethylase required for stem elongation in rice. PLoS Genet., 9, 2013
4IGP	Histone H3 Lysine 4 Demethylating Rice JMJ703 apo enzyme 分子名称: FE (III) ION, Os05g0196500 protein 著者 Chen, Q.F, Chen, X.S, Wang, Q, Zhang, F.B, Lou, Z.Y, Zhang, Q.F, Zhou, D.X. 登録日 2012-12-17 公開日 2013-04-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.003 Å) 主引用文献 Structural basis of a histone H3 lysine 4 demethylase required for stem elongation in rice. PLoS Genet., 9, 2013
4IGQ	Histone H3 Lysine 4 Demethylating Rice JMJ703 in complex with methylated H3K4 substrate 分子名称: FE (III) ION, N-OXALYLGLYCINE, Os05g0196500 protein, ... 著者 Chen, Q.F, Chen, X.S, Wang, Q, Zhang, F.B, Lou, Z.Y, Zhang, Q.F, Zhou, D.X. 登録日 2012-12-17 公開日 2013-04-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural basis of a histone H3 lysine 4 demethylase required for stem elongation in rice. PLoS Genet., 9, 2013
2KVM	Solution structure of the CBX7 chromodomain in complex with a H3K27me2 peptide 分子名称: Chromobox protein homolog 7, histone H3 peptide (residues 15-30) with dimethylated lysine 27 著者 Yap, K.L, Zeng, L, Zhou, M. 登録日 2010-03-17 公開日 2010-06-30 最終更新日 2020-02-05 実験手法 SOLUTION NMR 主引用文献 Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a. Mol.Cell, 38, 2010
2VPB	Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex 分子名称: B-CELL CLL/LYMPHOMA 9 PROTEIN, PYGOPUS HOMOLOG 1, SODIUM ION, ... 著者 Fiedler, M, Sanchez-Barrena, M.J, Nekrasov, M, Mieszczanek, J, Rybin, V, Muller, J, Evans, P, Bienz, M. 登録日 2008-02-27 公開日 2008-06-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell, 30, 2008
2VP7	Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex 分子名称: B-CELL CLL/LYMPHOMA 9 PROTEIN, PYGOPUS HOMOLOG 1, SULFATE ION, ... 著者 Fiedler, M, Sanchez-Barrena, M.J, Nekrasov, M, Mieszczanek, J, Rybin, V, Muller, J, Evans, P, Bienz, M. 登録日 2008-02-26 公開日 2008-06-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell, 30, 2008
2VPD	Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex 分子名称: B-CELL CLL/LYMPHOMA 9 PROTEIN, PYGOPUS HOMOLOG 1, ZINC ION 著者 Fiedler, M, Sanchez-Barrena, M.J, Nekrasov, M, Mieszczanek, J, Rybin, V, Muller, J, Evans, P, Bienz, M. 登録日 2008-02-27 公開日 2008-06-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell, 30, 2008

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