PDB: 1500 件ウェブページステータス検索Chemie searchBIRD

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2M8D	Structure of SRSF1 RRM2 in complex with the RNA 5'-UGAAGGAC-3' 分子名称: RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3'), Serine/arginine-rich splicing factor 1 著者 Clery, A, Sinha, R, Anczukow, O, Corrionero, A, Moursy, A, Daubner, G, Valcarcel, J, Krainer, A.R, Allain, F.H.T. 登録日 2013-05-17 公開日 2013-07-10 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Isolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition. Proc.Natl.Acad.Sci.USA, 110, 2013
2MXW	Solution NMR Structure of the OCRE Domain of RBM10 分子名称: RNA-binding protein 10 著者 Martin, B.T, Geralt, M, Serrano, P, Wuthrich, K, Joint Center for Structural Genomics (JCSG) 登録日 2015-01-20 公開日 2015-04-01 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR Structure of the OCRE Domain of RBM10 To be Published
3J6Y	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Koh, C.S, Brilot, A.F, Grigorieff, N, Korostelev, A.A. 登録日 2014-04-16 公開日 2014-06-11 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center. Proc.Natl.Acad.Sci.USA, 111, 2014
2MXV	NMR structure of the first Zinc Finger domain of RBM10 分子名称: RNA-binding protein 10, ZINC ION 著者 Serrano, P, Wuthrich, K, Geralt, M, Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) 登録日 2015-01-16 公開日 2015-01-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR structure of the first Zinc Finger domain of RBM10 To be Published
3K0J	Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module 分子名称: MAGNESIUM ION, RNA (87-MER), THIAMINE DIPHOSPHATE, ... 著者 Kulshina, N, Edwards, T.E, Ferre-D'Amare, A.R. 登録日 2009-09-24 公開日 2009-12-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Thermodynamic analysis of ligand binding and ligand binding-induced tertiary structure formation by the thiamine pyrophosphate riboswitch. Rna, 16, 2010
6HHQ	Crystal structure of compound C45 bound to the yeast 80S ribosome 分子名称: (3~{R})-3-[(1~{S})-2-[(1~{S},4~{a}~{R},6~{S},7~{S},8~{a}~{R})-6,7-bis(chloranyl)-5,5,8~{a}-trimethyl-2-methylidene-3,4,4~{a},6,7,8-hexahydro-1~{H}-naphthalen-1-yl]-1-oxidanyl-ethyl]pyrrolidine-2,5-dione, 18S ribosomal RNA, 25S ribosomal RNA, ... 著者 Pellegrino, S, Vanderwal, C.D, Yusupov, M. 登録日 2018-08-28 公開日 2019-02-20 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.10000038 Å) 主引用文献 Understanding the role of intermolecular interactions between lissoclimides and the eukaryotic ribosome. Nucleic Acids Res., 47, 2019
6HMO	Solution structure of the RNA duplex formed by the 5'-end of U1snRNA and the 5'-splice site of SMN2 exon7 in complex with the SMN-C5 splicing modifier 分子名称: 2-(8-fluoranyl-2-methyl-imidazo[1,2-a]pyridin-6-yl)-7-(4-methylpiperazin-1-yl)pyrido[1,2-a]pyrimidin-4-one, RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3') 著者 Campagne, S, Allain, F.H. 登録日 2018-09-12 公開日 2019-08-14 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis of a small molecule targeting RNA for a specific splicing correction. Nat.Chem.Biol., 15, 2019
4ITS	Crystal structure of the catalytic domain of human Pus1 with MES in the active site 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, tRNA pseudouridine synthase A, ... 著者 Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M. 登録日 2013-01-18 公開日 2013-06-05 最終更新日 2013-10-23 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities. J.Mol.Biol., 425, 2013
4IQM	Crystal structure of the catalytic domain of human Pus1 分子名称: tRNA pseudouridine synthase A, mitochondrial 著者 Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M. 登録日 2013-01-11 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities. J.Mol.Biol., 425, 2013
3J6X	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Koh, C.S, Brilot, A.F, Grigorieff, N, Korostelev, A.A. 登録日 2014-04-16 公開日 2014-06-11 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.1 Å) 主引用文献 Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center. Proc.Natl.Acad.Sci.USA, 111, 2014
3J77	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Svidritskiy, E, Brilot, A.F, Koh, C.S, Grigorieff, N, Korostelev, A.A. 登録日 2014-05-29 公開日 2014-08-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.2 Å) 主引用文献 Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations. Structure, 22, 2014
6I7O	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition. 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Cheng, J, Becker, T, Beckmann, R. 登録日 2018-11-16 公開日 2019-01-16 最終更新日 2019-03-13 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways. EMBO J., 38, 2019
6HD7	Cryo-EM structure of the ribosome-NatA complex 分子名称: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 5.8S rRNA, 5S rRNA, ... 著者 Knorr, A.G, Becker, T, Beckmann, R. 登録日 2018-08-17 公開日 2018-12-19 最終更新日 2019-01-16 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation. Nat. Struct. Mol. Biol., 26, 2019
2K8Q	NMR Structure of Shq1p N-terminal domain 分子名称: Protein SHQ1 著者 Godin, K.S, Varani, G. 登録日 2008-09-18 公開日 2009-05-05 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The box H/ACA snoRNP assembly factor Shq1p is a chaperone protein homologous to Hsp90 cochaperones that binds to the Cbf5p enzyme J.Mol.Biol., 390, 2009
3KTP	Structural basis of GW182 recognition by poly(A)-binding protein 分子名称: Polyadenylate-binding protein 1, Trinucleotide repeat-containing gene 6C protein 著者 Kozlov, G, Gehring, K. 登録日 2009-11-25 公開日 2010-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis of binding of P-body-associated proteins GW182 and ataxin-2 by the Mlle domain of poly(A)-binding protein. J.Biol.Chem., 285, 2010
3IWN	Co-crystal structure of a bacterial c-di-GMP riboswitch 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), C-di-GMP riboswitch, U1 small nuclear ribonucleoprotein A 著者 Kulshina, N, Baird, N.J, Ferre-D'Amare, A.R. 登録日 2009-09-02 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch. Nat.Struct.Mol.Biol., 16, 2009
3J78	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Svidritskiy, E, Brilot, A.F, Koh, C.S, Grigorieff, N, Korostelev, A.A. 登録日 2014-05-29 公開日 2014-08-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations. Structure, 22, 2014
3JCT	Cryo-em structure of eukaryotic pre-60S ribosomal subunits 分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ... 著者 Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N. 登録日 2016-03-09 公開日 2016-06-01 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.08 Å) 主引用文献 Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes Nature, 534, 2016
3KUJ	Crystal structure of C-terminal domain of PABPC1 in complex with binding region of eRF3a 分子名称: GSPT1 protein, Polyadenylate-binding protein 1, SULFATE ION 著者 Kozlov, G, Gehring, K. 登録日 2009-11-27 公開日 2010-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Molecular basis of eRF3 recognition by the MLLE domain of poly(A)-binding protein. Plos One, 5, 2010
3KUS	Crystal structure of the MLLE domain of poly(A)-binding protein in complex with the binding region of Paip2 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, PAIP2 protein, ... 著者 Kozlov, G, Gehring, K. 登録日 2009-11-27 公開日 2010-02-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein. J.Mol.Biol., 397, 2010
3KUI	Crystal structure of C-terminal domain of PABPC1 in complex with binding region of eRF3a 分子名称: GSPT1 protein, Polyadenylate-binding protein 1, SULFATE ION, ... 著者 Kozlov, G, Gehring, K. 登録日 2009-11-27 公開日 2010-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular basis of eRF3 recognition by the MLLE domain of poly(A)-binding protein. Plos One, 5, 2010
3KUR	Crystal structure of the MLLE domain of poly(A)-binding protein 分子名称: CHLORIDE ION, Polyadenylate-binding protein 1 著者 Kozlov, G, Gehring, K. 登録日 2009-11-27 公開日 2010-02-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein. J.Mol.Biol., 397, 2010
2PE8	Crystal structure of the UHM domain of human SPF45 (free form) 分子名称: Splicing factor 45 著者 Corsini, L, Basquin, J, Hothorn, M, Sattler, M. 登録日 2007-04-02 公開日 2007-06-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 U2AF-homology motif interactions are required for alternative splicing regulation by SPF45. Nat.Struct.Mol.Biol., 14, 2007
3LPY	Crystal structure of the RRM domain of CyP33 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Peptidyl-prolyl cis-trans isomerase E, SULFATE ION 著者 Wang, Z, Patel, D.J. 登録日 2010-02-07 公開日 2010-07-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression. Cell(Cambridge,Mass.), 141, 2010
3KUT	Crystal structure of the MLLE domain of poly(A)-binding protein in complex with the binding region of Paip2 分子名称: CHLORIDE ION, PAIP2 protein, Polyadenylate-binding protein 1 著者 Kozlov, G, Gehring, K. 登録日 2009-11-27 公開日 2010-02-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein. J.Mol.Biol., 397, 2010

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