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PDB: 19 results

4QIL
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BU of 4qil by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA
Descriptor: 5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3', CALCIUM ION, Roquin-1
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
4QIK
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BU of 4qik by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Descriptor: 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3', CHLORIDE ION, GLYCEROL, ...
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
4QOZ
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BU of 4qoz by Molmil
Crystal structure of the histone mRNA stem-loop, stem-loop binding protein (phosphorylated), and 3'hExo ternary complex
Descriptor: 3'-5' exoribonuclease 1, Histone RNA hairpin-binding protein, histone mRNA stem-loop
Authors:Tan, D, Tong, L.
Deposit date:2014-06-21
Release date:2014-07-23
Last modified:2014-08-06
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
7XRC
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BU of 7xrc by Molmil
Crystal Structure of the dimeric Brn2 (Pou3f2) POU domain bound to palindromic MORE DNA
Descriptor: More palindromic Oct factor Recognition Element (MORE), POU domain protein
Authors:Tan, D.S.Y, Jauch, R.
Deposit date:2022-05-10
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The homeodomain of Oct4 is a dimeric binder of methylated CpG elements.
Nucleic Acids Res., 51, 2023
4IZD
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BU of 4izd by Molmil
Crystal structure of DmdD E121A in complex with MMPA-CoA
Descriptor: 3-methylmercaptopropionate-CoA (MMPA-CoA), Enoyl-CoA hydratase/isomerase family protein
Authors:Tan, D, Tong, L.
Deposit date:2013-01-29
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of DmdD, a Crotonase Superfamily Enzyme That Catalyzes the Hydration and Hydrolysis of Methylthioacryloyl-CoA.
Plos One, 8, 2013
4IZC
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BU of 4izc by Molmil
Crystal structure of DmdD E121A in complex with MTA-CoA
Descriptor: Enoyl-CoA hydratase/isomerase family protein, methylthioacryloyl-CoA
Authors:Tan, D, Tong, L.
Deposit date:2013-01-29
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of DmdD, a Crotonase Superfamily Enzyme That Catalyzes the Hydration and Hydrolysis of Methylthioacryloyl-CoA.
Plos One, 8, 2013
4L8R
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BU of 4l8r by Molmil
Structure of mrna stem-loop, human stem-loop binding protein and 3'hexo ternary complex
Descriptor: 3'-5' exoribonuclease 1, HISTONE MRNA STEM-LOOP, Histone RNA hairpin-binding protein
Authors:Tan, D, Tong, L.
Deposit date:2013-06-17
Release date:2013-07-10
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Histone Mrna Stem-Loop, Human Stem-Loop Binding Protein, and 3'Hexo Ternary Complex.
Science, 339, 2013
4IZB
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BU of 4izb by Molmil
Crystal structure of DmdD, a crotonase superfamily enzyme that catalyzes the hydration and hydrolysis of methylthioacryloyl-CoA
Descriptor: Enoyl-CoA hydratase/isomerase family protein
Authors:Tan, D, Tong, L.
Deposit date:2013-01-29
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Crystal Structure of DmdD, a Crotonase Superfamily Enzyme That Catalyzes the Hydration and Hydrolysis of Methylthioacryloyl-CoA.
Plos One, 8, 2013
7M1X
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BU of 7m1x by Molmil
Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z
Descriptor: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ...
Authors:Tan, D, Lewis, T.
Deposit date:2021-03-15
Release date:2021-09-29
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of chromatin regulation by histone variant H2A.Z.
Nucleic Acids Res., 49, 2021
3EDL
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BU of 3edl by Molmil
Kinesin13-Microtubule Ring complex
Descriptor: 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE, Beta tubulin, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tan, D, Rice, W.J, Sosa, H.
Deposit date:2008-09-03
Release date:2009-01-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (28 Å)
Cite:Structure of the kinesin13-microtubule ring complex.
Structure, 16, 2008
6P7W
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BU of 6p7w by Molmil
Structure of the K. lactis CBF3 core - Ndc10 D1 complex
Descriptor: Cep3, Ctf13, Ndc10, ...
Authors:Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
Deposit date:2019-06-06
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
6P7V
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BU of 6p7v by Molmil
Structure of the K. lactis CBF3 core
Descriptor: Cep3, Ctf13, Skp1
Authors:Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
Deposit date:2019-06-06
Release date:2019-09-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
6P7X
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BU of 6p7x by Molmil
Structure of the K. lactis CBF3 core - Ndc10 D1D2 complex
Descriptor: Cep3, Ctf13, Ndc10, ...
Authors:Lee, P.D, Wei, H, Tan, D, Harrison, S.C.
Deposit date:2019-06-06
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol., 431, 2019
5H64
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BU of 5h64 by Molmil
Cryo-EM structure of mTORC1
Descriptor: Regulatory-associated protein of mTOR, Serine/threonine-protein kinase mTOR, Target of rapamycin complex subunit LST8
Authors:Yang, H, Wang, J, Liu, M, Chen, X, Huang, M, Tan, D, Dong, M, Wong, C.C.L, Wang, J, Xu, Y, Wang, H.
Deposit date:2016-11-10
Release date:2017-01-25
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:4.4 angstrom Resolution Cryo-EM structure of human mTOR Complex 1
Protein Cell, 7, 2016
5G06
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BU of 5g06 by Molmil
Cryo-EM structure of yeast cytoplasmic exosome
Descriptor: EXOSOME COMPLEX COMPONENT CSL4, EXOSOME COMPLEX COMPONENT MTR3, EXOSOME COMPLEX COMPONENT RRP4, ...
Authors:Liu, J.J, Niu, C.Y, Wu, Y, Tan, D, Wang, Y, Ye, M.D, Liu, Y, Zhao, W.W, Zhou, K, Liu, Q.S, Dai, J.B, Yang, X.R, Dong, M.Q, Huang, N, Wang, H.W.
Deposit date:2016-03-17
Release date:2016-06-15
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryoem Structure of Yeast Cytoplasmic Exosome Complex.
Cell Res., 26, 2016
7CV4
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BU of 7cv4 by Molmil
Quadruplex-duplex hybrid structure in the PIM1 gene, Form 2
Descriptor: DNA (26-MER)
Authors:Winnerdy, F.R, Tan, D.T.J, Lim, K.W, Phan, A.T.
Deposit date:2020-08-25
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Coexistence of two quadruplex-duplex hybrids in the PIM1 gene.
Nucleic Acids Res., 48, 2020
3J2U
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BU of 3j2u by Molmil
Kinesin-13 KLP10A HD in complex with CS-tubulin and a microtubule
Descriptor: Kinesin-like protein Klp10A, Tubulin alpha-1A chain, Tubulin beta-2B chain
Authors:Asenjo, A.B, Chatterjee, C, Tan, D, DePaoli, V, Rice, W.J, Diaz-Avalos, R, Silvestry, M, Sosa, H.
Deposit date:2013-01-10
Release date:2013-03-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Structural model for tubulin recognition and deformation by Kinesin-13 microtubule depolymerases.
Cell Rep, 3, 2013
3JCT
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BU of 3jct by Molmil
Cryo-em structure of eukaryotic pre-60S ribosomal subunits
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N.
Deposit date:2016-03-09
Release date:2016-06-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes
Nature, 534, 2016
7CV3
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BU of 7cv3 by Molmil
Quadruplex-duplex hybrid structure in the PIM1 gene, Form 1
Descriptor: PIM1 promoter, Form 1
Authors:Winnerdy, F.R, Tan, D.J.Y, Lim, K.W, Phan, A.T.
Deposit date:2020-08-25
Release date:2020-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Coexistence of two quadruplex-duplex hybrids in the PIM1 gene.
Nucleic Acids Res., 48, 2020

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