PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

---

2ZVN	NEMO CoZi domain incomplex with diubiquitin in P212121 space group 分子名称: NF-kappa-B essential modulator, UBC protein 著者 Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I. 登録日 2008-11-12 公開日 2009-03-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation Cell(Cambridge,Mass.), 136, 2009
3C0R	Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin 分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1 著者 Messick, T.E, Marmorstein, R. 登録日 2008-01-21 公開日 2008-02-19 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.315 Å) 主引用文献 Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein J.Biol.Chem., 283, 2008
3BY4	Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin 分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1 著者 Messick, T.E, Marmorstein, R. 登録日 2008-01-15 公開日 2008-02-19 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein J.Biol.Chem., 283, 2008
2C7M	Human Rabex-5 residues 1-74 in complex with Ubiquitin 分子名称: RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR 1, UBIQUITIN, ZINC ION 著者 Penengo, L, Mapelli, M, Murachelli, A.G, Confalioneri, S, Magri, L, Musacchio, A, Di Fiore, P.P, Polo, S, Schneider, T.R. 登録日 2005-11-25 公開日 2006-02-15 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the ubiquitin binding domains of rabex-5 reveals two modes of interaction with ubiquitin. Cell, 124, 2006
2ZVO	NEMO CoZi domain in complex with diubiquitin in C2 space group 分子名称: NF-kappa-B essential modulator, UBC protein 著者 Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I. 登録日 2008-11-12 公開日 2009-03-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation Cell(Cambridge,Mass.), 136, 2009
2AYO	Structure of USP14 bound to ubquitin aldehyde 分子名称: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 14 著者 Hu, M, Li, P, Jeffrey, P.D, Shi, Y. 登録日 2005-09-07 公開日 2005-10-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14. Embo J., 24, 2005
3AI5	Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein 分子名称: 1,2-ETHANEDIOL, yeast enhanced green fluorescent protein,Ubiquitin 著者 Suzuki, N, Wakatsuki, S, Kawasaki, M. 登録日 2010-05-10 公開日 2010-09-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystallization of small proteins assisted by green fluorescent protein Acta Crystallogr.,Sect.D, 66, 2010
2FID	Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin 分子名称: Rab5 GDP/GTP exchange factor, Ubiquitin, ZINC ION 著者 Lee, S, Hurley, J.H. 登録日 2005-12-29 公開日 2006-02-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5 Nat.Struct.Mol.Biol., 13, 2006
2FIF	Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin 分子名称: Rab5 GDP/GTP exchange factor, SULFATE ION, Ubiquitin, ... 著者 Lee, S, Hurley, J.H. 登録日 2005-12-29 公開日 2006-02-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5 Nat.Struct.Mol.Biol., 13, 2006
2DX5	The complex structure between the mouse EAP45-GLUE domain and ubiquitin 分子名称: Ubiquitin, Vacuolar protein sorting protein 36 著者 Hirano, S, Suzuki, N, Slagsvold, T, Kawasaki, M, Trambaiolo, D, Kato, R, Stenmark, H, Wakatsuki, S. 登録日 2006-08-24 公開日 2006-10-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Structural basis of ubiquitin recognition by mammalian Eap45 GLUE domain Nat.Struct.Mol.Biol., 13, 2006
2FNJ	Crystal structure of a B30.2/SPRY domain-containing protein GUSTAVUS in complex with Elongin B and Elongin C 分子名称: CG2944-PF, isoform F, Transcription elongation factor B polypeptide 1, ... 著者 Woo, J.S, Oh, B.H. 登録日 2006-01-11 公開日 2006-03-21 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and functional insights into the B30.2/SPRY domain Embo J., 25, 2006
3LDZ	Crystal structure of human STAM1 VHS domain in complex with ubiquitin 分子名称: Signal transducing adapter molecule 1, Ubiquitin 著者 Ren, X, Hurley, J.H. 登録日 2010-01-13 公開日 2010-03-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 VHS domains of ESCRT-0 cooperate in high-avidity binding to polyubiquitinated cargo. Embo J., 29, 2010
3M63	Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Dsk2 分子名称: PENTAETHYLENE GLYCOL, POTASSIUM ION, Ubiquitin conjugation factor E4, ... 著者 Haenzelmann, P, Schindelin, H. 登録日 2010-03-15 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. J.Biol.Chem., 285, 2010
3M62	Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23 分子名称: PENTAETHYLENE GLYCOL, POTASSIUM ION, UV excision repair protein RAD23, ... 著者 Haenzelmann, P, Schindelin, H. 登録日 2010-03-15 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. J.Biol.Chem., 285, 2010
3MTN	Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor 分子名称: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ... 著者 Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2010-04-30 公開日 2010-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
3MHS	Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde 分子名称: 1,2-ETHANEDIOL, GLYCEROL, Protein SUS1, ... 著者 Samara, N.L, Datta, A.B, Berndsen, C.E, Zhang, X, Yao, T, Cohen, R.E, Wolberger, C. 登録日 2010-04-08 公開日 2010-04-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structural insights into the assembly and function of the SAGA deubiquitinating module. Science, 328, 2010
3NHE	High Resolution Structure (1.26A) of USP2a in Complex with Ubiquitin 分子名称: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 2, ZINC ION 著者 Schormann, N, DeLucas, L.J, Powell McCombs, D. 登録日 2010-06-14 公開日 2010-06-30 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 High resolution structure of USP2a in complex with ubiquitin To be Published
3O65	Crystal structure of a Josephin-ubiquitin complex: Evolutionary restraints on ataxin-3 deubiquitinating activity 分子名称: Putative ataxin-3-like protein, SODIUM ION, Ubiquitin 著者 Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J. 登録日 2010-07-28 公開日 2010-11-24 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of a Josephin-Ubiquitin Complex: EVOLUTIONARY RESTRAINTS ON ATAXIN-3 DEUBIQUITINATING ACTIVITY. J.Biol.Chem., 286, 2011
3OFI	Crystal structure of human insulin-degrading enzyme in complex with ubiquitin 分子名称: 1,4-DIETHYLENE DIOXIDE, Insulin-degrading enzyme, Ubiquitin, ... 著者 Kalas, V, Ralat, L.A, Tang, W.-J. 登録日 2010-08-15 公開日 2010-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Ubiquitin is a novel substrate for human insulin-degrading enzyme. J.Mol.Biol., 406, 2011
3N3K	The catalytic domain of USP8 in complex with a USP8 specific inhibitor 分子名称: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 8, ZINC ION 著者 Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Allali-Hassani, A, Lam, R, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium, Structural Genomics Consortium (SGC) 登録日 2010-05-20 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
3OLM	Structure and Function of a Ubiquitin Binding Site within the Catalytic Domain of a HECT Ubiquitin Ligase 分子名称: E3 ubiquitin-protein ligase RSP5, Ubiquitin 著者 Kim, H.C, Steffen, A, Chen, J, Huibregtse, J.M. 登録日 2010-08-26 公開日 2011-03-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.495 Å) 主引用文献 Structure and function of a HECT domain ubiquitin-binding site. Embo Rep., 12, 2011
3PHX	OTU Domain of Crimean Congo Hemorrhagic Fever Virus in complex with ISG15 分子名称: ACETIC ACID, ETHANAMINE, RNA-directed RNA polymerase L, ... 著者 Akutsu, M, Ye, Y, Virdee, S, Komander, D. 登録日 2010-11-04 公開日 2011-02-02 最終更新日 2014-08-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Molecular basis for ubiquitin and ISG15 cross-reactivity in viral ovarian tumor domains. Proc.Natl.Acad.Sci.USA, 108, 2011
3PGE	Structure of sumoylated PCNA 分子名称: Proliferating cell nuclear antigen, SUMO-modified proliferating cell nuclear antigen 著者 Freudenthal, B.D, Brogie, J.E, Gakhar, L, Washington, T. 登録日 2010-11-01 公開日 2010-12-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structure of SUMO-Modified Proliferating Cell Nuclear Antigen. J.Mol.Biol., 406, 2011
3PHD	Crystal structure of human HDAC6 in complex with ubiquitin 分子名称: Histone deacetylase 6, Polyubiquitin, ZINC ION 著者 Dong, A, Qui, W, Ravichandran, M, Schuetz, A, Loppnau, P, Li, F, Mackenzie, F, Kozieradzki, I, Ouyang, H, Structural Genomics Consortium (SGC) 登録日 2010-11-03 公開日 2011-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Protein Aggregates Are Recruited to Aggresome by Histone Deacetylase 6 via Unanchored Ubiquitin C Termini. J.Biol.Chem., 287, 2012
5ZQ6	SidE-Ubi-ADPr 分子名称: ADENOSINE-5'-DIPHOSPHATE, SidE, Ubiquitin 著者 Wang, Y, Gao, A, Gao, P. 登録日 2018-04-17 公開日 2018-05-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.009 Å) 主引用文献 Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE. Cell, 173, 2018

<12131415161718192021222324252627>