Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8G04
DownloadVisualize
BU of 8g04 by Molmil
Structure of signaling thrombopoietin-MPL receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombopoietin, Thrombopoietin receptor, ...
著者Tsutsumi, N, Jude, K.M, Gati, C, Garcia, K.C.
登録日2023-01-31
公開日2023-08-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the thrombopoietin-MPL receptor complex is a blueprint for biasing hematopoiesis.
Cell, 186, 2023
8FZA
DownloadVisualize
BU of 8fza by Molmil
Class I type III preQ1 riboswitch from E. coli
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, MANGANESE (II) ION, PreQ1 Riboswitch (30-MER)
著者Wedekind, J.E, Schroeder, G.M, Jenkins, J.L.
登録日2023-01-27
公開日2023-08-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and function analysis of a type III preQ 1 -I riboswitch from Escherichia coli reveals direct metabolite sensing by the Shine-Dalgarno sequence.
J.Biol.Chem., 299, 2023
8FR7
DownloadVisualize
BU of 8fr7 by Molmil
A hinge glycan regulates spike bending and impacts coronavirus infectivity
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pintilie, G, Wilson, E, Chmielewski, D, Schmid, M.F, Jin, J, Chen, M, Singharoy, A, Chiu, W.
登録日2023-01-06
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献A hinge glycan regulates spike bending and impacts coronavirus infectivity
To Be Published
8QWM
DownloadVisualize
BU of 8qwm by Molmil
Structure of p53 cancer mutant Y205C
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, L(+)-TARTARIC ACID, ...
著者Balourdas, D.I, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2023-10-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis of p53 inactivation by cavity-creating cancer mutations and its implications for the development of mutant p53 reactivators.
Cell Death Dis, 15, 2024
8CYF
DownloadVisualize
BU of 8cyf by Molmil
WhiB3 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA
分子名称: CACODYLATE ION, DNA (5'-D(*CP*AP*CP*CP*AP*CP*AP*AP*CP*CP*GP*AP*TP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*AP*AP*AP*TP*CP*GP*GP*TP*TP*GP*TP*GP*GP*T)-3'), ...
著者Wan, T, Zhang, L.M.
登録日2022-05-23
公開日2023-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural basis of DNA binding by the WhiB-like transcription factor WhiB3 in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2023
8CZZ
DownloadVisualize
BU of 8czz by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with Temsavir, 8ANC195, and 10-1074
分子名称: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, Y, Pozharski, E, Tolbert, W, Pazgier, M.
登録日2022-05-25
公開日2023-05-31
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
7SX3
DownloadVisualize
BU of 7sx3 by Molmil
Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 1/2
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kschonsak, M, Chua, H.C, Weidling, C, Chakouri, N, Noland, C.L, Schott, K, Chang, T, Tam, C, Patel, N, Arthur, C.P, Leitner, A, Ben-Johny, M, Ciferri, C, Pless, S.A, Payandeh, J.
登録日2021-11-22
公開日2021-12-29
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural architecture of the human NALCN channelosome.
Nature, 603, 2022
6UYM
DownloadVisualize
BU of 6uym by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v6 redesigned core from genotype 1a bound to broadly neutralizing antibody AR3C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
著者Tzarum, N, Wilson, I.A, Zhu, J.
登録日2019-11-13
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.848 Å)
主引用文献Proof of concept for rational design of hepatitis C virus E2 core nanoparticle vaccines.
Sci Adv, 6, 2020
7SX4
DownloadVisualize
BU of 7sx4 by Molmil
Human NALCN-FAM155A-UNC79-UNC80 channelosome with CaM bound, conformation 2/2
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kschonsak, M, Chua, H.C, Weidling, C, Chakouri, N, Noland, C.L, Schott, K, Chang, T, Tam, C, Patel, N, Arthur, C.P, Leitner, A, Ben-Johny, M, Ciferri, C, Pless, S.A, Payandeh, J.
登録日2021-11-22
公開日2021-12-29
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural architecture of the human NALCN channelosome.
Nature, 603, 2022
7SQM
DownloadVisualize
BU of 7sqm by Molmil
Discovery and Preclinical Pharmacology of INE963, A Potent and Fast-Acting Blood-Stage Antimalarial with a High Barrier to Resistance and Potential for Single-Dose Cure in Uncomplicated Malaria
分子名称: 1-[(4S)-5-(2,4-difluorophenyl)imidazo[2,1-b][1,3,4]thiadiazol-2-yl]-4-methylpiperidin-4-amine, GLYCEROL, Serine/threonine-protein kinase haspin
著者Shu, W, Yokokawa, F.
登録日2021-11-05
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Failure of artesunate-mefloquine combination therapy for uncompli-cated Plasmodium falciparum malaria in southern Cambodia.
Malar. J., 2009, 8, 10, 2009
8QZH
DownloadVisualize
BU of 8qzh by Molmil
Crystal structure of apo-PptT from Mycobacterium tuberculosis
分子名称: 4'-phosphopantetheinyl transferase PptT, ACETATE ION, MAGNESIUM ION
著者Gavalda, S, Carivenc, C, Mourey, L, Pedelacq, J.D.
登録日2023-10-27
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Catalytic Cycle of Type II 4'-Phosphopantetheinyl Transferases
Acs Catalysis, 14, 2024
8F7Z
DownloadVisualize
BU of 8f7z by Molmil
VRC34.01_mm28 bound to fusion peptide
分子名称: HIV-1 Env Fusion Peptide, VRC34_m228 Light Chain, VRC34_mm28 Heavy Chain
著者Olia, A.S, Kwong, P.D.
登録日2022-11-21
公開日2023-11-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
8QQI
DownloadVisualize
BU of 8qqi by Molmil
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
分子名称: DNA gyrase subunit A, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Ghilarov, D, Martin, N.I, van der Stelt, M.
登録日2023-10-04
公開日2024-06-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Discovery of isoquinoline sulfonamides as allosteric gyrase inhibitors with activity against fluoroquinolone-resistant bacteria.
Nat.Chem., 2024
6VGD
DownloadVisualize
BU of 6vgd by Molmil
Crystal structure of the DNA binding domain (DBD) of human FLI1 and the complex of the DBD of human Runx2 with core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
分子名称: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
著者Hou, C, Tsodikov, O.V.
登録日2020-01-07
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
8QWP
DownloadVisualize
BU of 8qwp by Molmil
Structure of p53 cancer mutant Y236C
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, L(+)-TARTARIC ACID, ...
著者Balourdas, D.I, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2023-10-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of p53 inactivation by cavity-creating cancer mutations and its implications for the development of mutant p53 reactivators.
Cell Death Dis, 15, 2024
6UQG
DownloadVisualize
BU of 6uqg by Molmil
Human HCN1 channel Y289D mutant
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
著者Lee, C.-H, MacKinnon, R.
登録日2019-10-19
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Voltage Sensor Movements during Hyperpolarization in the HCN Channel.
Cell, 179, 2019
6UQR
DownloadVisualize
BU of 6uqr by Molmil
Complex of IgE and Ligelizumab
分子名称: IgE, Ligelizumab, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Tarchevskaya, S.S, Kleinboelting, S, Jardetzky, T.S.
登録日2019-10-21
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.6502912 Å)
主引用文献The mechanistic and functional profile of the therapeutic anti-IgE antibody ligelizumab differs from omalizumab.
Nat Commun, 11, 2020
8F8M
DownloadVisualize
BU of 8f8m by Molmil
LRH-1 bound to small molecule Tet and fragment of coactivator Tif2
分子名称: (1~{R},3~{a}~{R},6~{a}~{R})-4-phenyl-3~{a}-(1-phenylethenyl)-5-[9-(1~{H}-1,2,3,4-tetrazol-5-yl)nonyl]-2,3,6,6~{a}-tetrahydro-1~{H}-pentalen-1-ol, Nuclear receptor coactivator 2, Nuclear receptor subfamily 5 group A member 2
著者Cato, M.L, Ortlund, E.A.
登録日2022-11-22
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Isosteric improvements to liver receptor homolog-1 small molecule modulators
To Be Published
6UTC
DownloadVisualize
BU of 6utc by Molmil
Intra-chain disulfide bonded ToxR periplasmic domain from Vibrio vulnificus
分子名称: SULFATE ION, Transcriptional activator ToxR
著者Midgett, C.R, Swindell, R.A, Kull, F.J.
登録日2019-10-29
公開日2020-06-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.249 Å)
主引用文献A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts.
Sci Rep, 10, 2020
7SSM
DownloadVisualize
BU of 7ssm by Molmil
Crystal structure of human STING R232 in complex with compound 11
分子名称: 2-({[(8R)-pyrazolo[1,5-a]pyrimidine-3-carbonyl]amino}methyl)-1-benzofuran-7-carboxylic acid, Stimulator of interferon genes protein
著者Sack, J.S, Critton, D.A.
登録日2021-11-11
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Discovery of Non-Nucleotide Small-Molecule STING Agonists via Chemotype Hybridization.
J.Med.Chem., 65, 2022
8FYG
DownloadVisualize
BU of 8fyg by Molmil
Crystal structure of Hyaluronate lyase A from Cutibacterium acnes
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Hyaluronate lyase
著者Katiki, M, McNally, R, Chatterjee, A, Hajam, I.A, Liu, G.Y, Murali, R.
登録日2023-01-26
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Functional divergence of a bacterial enzyme promotes healthy or acneic skin.
Nat Commun, 14, 2023
8DI7
DownloadVisualize
BU of 8di7 by Molmil
CMY-2
分子名称: Beta-lactamase, SULFATE ION
著者Ahmadvand, P, Call, D.R.
登録日2022-06-28
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural characterization of CMY-2 and its interactions with ampicillin and the cephalosporins - ceftiofur, DFC, DFC-dimer, DFC-cysteine, and nitrocefin
To Be Published
8FHS
DownloadVisualize
BU of 8fhs by Molmil
Human L-type voltage-gated calcium channel Cav1.2 in the presence of amiodarone and sofosbuvir at 3.3 Angstrom resolution
分子名称: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gao, S, Yao, X, Yan, N.
登録日2022-12-15
公開日2023-12-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for human Ca v 1.2 inhibition by multiple drugs and the neurotoxin calciseptine.
Cell, 186, 2023
7TA5
DownloadVisualize
BU of 7ta5 by Molmil
Crystal structure of cyanophycin synthetase 2 from Gloeothece citriformis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, D(-)-TARTARIC ACID, ...
著者Sharon, I, Schmeing, T.M.
登録日2021-12-20
公開日2022-03-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and Function of the beta-Asp-Arg Polymerase Cyanophycin Synthetase 2.
Acs Chem.Biol., 17, 2022
8FNX
DownloadVisualize
BU of 8fnx by Molmil
Crystal structure of Hyaluronate lyase B from Cutibacterium acnes
分子名称: GLYCEROL, Hyaluronate lyase, PHOSPHATE ION
著者Katiki, M, McNally, R, Chatterjee, A, Hajam, I.A, Liu, G.Y, Murali, R.
登録日2022-12-28
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional divergence of a bacterial enzyme promotes healthy or acneic skin.
Nat Commun, 14, 2023

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon