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PDB: 90 results

8CT0
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BU of 8ct0 by Molmil
Crystal structure of FAD reductase CtcQ from Kitasatospora aureofaciens in complex with FAD and NAD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin reductase (NADH), ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2022-05-13
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structures and complex formation of halogenase CtcP and FAD reductase CtcQ from the chlortetracycline biosynthetic pathway
To Be Published
5JVW
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BU of 5jvw by Molmil
Crystal structure of mithramycin analogue MTM SA-Trp in complex with a 10-mer DNA AGAGGCCTCT.
Descriptor: DNA (5'-D(*AP*GP*AP*GP*GP*CP*CP*TP*CP*T)-3'), Plicamycin, mithramycin analogue MTM SA-Trp, ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2016-05-11
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of mithramycin analogues bound to DNA and implications for targeting transcription factor FLI1.
Nucleic Acids Res., 44, 2016
5JVT
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BU of 5jvt by Molmil
Crystal structure of the DNA binding domain of transcription factor FLI1 in complex with an 11-mer DNA GACCGGAAGTG
Descriptor: DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), Friend leukemia integration 1 transcription factor, ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2016-05-11
Release date:2016-09-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of mithramycin analogues bound to DNA and implications for targeting transcription factor FLI1.
Nucleic Acids Res., 44, 2016
6DWT
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BU of 6dwt by Molmil
Crystal structure of double-stranded DNA GAGGCCTC, crystals grown in Mg2+
Descriptor: DNA (5'-D(*GP*AP*GP*GP*CP*CP*TP*C)-3'), MAGNESIUM ION
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2018-06-27
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
6DXJ
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BU of 6dxj by Molmil
Crystal structure of double-stranded DNA GAGGCCTC; crystals grown in Zn2+
Descriptor: DNA (5'-D(*GP*AP*GP*GP*CP*CP*TP*C)-3'), ZINC ION
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2018-06-29
Release date:2019-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
6DY9
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BU of 6dy9 by Molmil
Crystal structure of double-stranded DNA GGGATCCC; crystals grown in Zn2+
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*C)-3'), ZINC ION
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2018-07-01
Release date:2019-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
4RV9
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BU of 4rv9 by Molmil
Crystal structure of MtmC in complex with SAH
Descriptor: ACETATE ION, CHLORIDE ION, D-mycarose 3-C-methyltransferase, ...
Authors:Hou, C, Chen, J.-M, Rohr, J, Tsodikov, O.V.
Deposit date:2014-11-25
Release date:2015-02-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into MtmC, a Bifunctional Ketoreductase-Methyltransferase Involved in the Assembly of the Mithramycin Trisaccharide Chain.
Biochemistry, 54, 2015
6DY5
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BU of 6dy5 by Molmil
Crystal structure of double-stranded DNA AGGGATCCCT in complex with Zn2+
Descriptor: DNA (5'-D(*AP*GP*GP*GP*AP*TP*CP*CP*CP*T)-3'), SPERMIDINE, ZINC ION
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2018-07-01
Release date:2019-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Utilizing guanine coordinated Zn2+ to determine DNA crystal structures by single-wavelength anomalous diffraction
Acta Crystallogr.,Sect.D, 75, 2019
6OVQ
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BU of 6ovq by Molmil
Crystal structure of mithramycin 3-side chain keto-reductase MtmW
Descriptor: GLYCEROL, Putative Side chain reductase
Authors:Hou, C, Yu, X, Rohr, J, Tsodikov, O.V.
Deposit date:2019-05-08
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of a Cryptic Intermediate in Late Steps of Mithramycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 59, 2020
6OW0
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BU of 6ow0 by Molmil
Crystal structure of mithramycin 3-side chain keto-reductase MtmW in complex with NAD+ and PEG
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, MtmW, ...
Authors:Hou, C, Yu, X, Rohr, J, Tsodikov, O.V.
Deposit date:2019-05-08
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Discovery of a Cryptic Intermediate in Late Steps of Mithramycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 59, 2020
6OVX
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BU of 6ovx by Molmil
Crystal structure of mithramycin 3-side chain keto-reductase MtmW in complex with NAD+, P422 form
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative side chain reductase
Authors:Hou, C, Yu, X, Rohr, J, Tsodikov, O.V.
Deposit date:2019-05-08
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a Cryptic Intermediate in Late Steps of Mithramycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 59, 2020
5E8I
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BU of 5e8i by Molmil
Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with a 10-mer DNA ACCGGAAGTG
Descriptor: CALCIUM ION, DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2015-10-14
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural Basis for Dimerization and DNA Binding of Transcription Factor FLI1.
Biochemistry, 54, 2015
7SZ6
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BU of 7sz6 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-3
Descriptor: Portal protein
Authors:Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-25
Release date:2022-03-30
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (6.24 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7SZ4
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BU of 7sz4 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-2
Descriptor: Portal protein
Authors:Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-25
Release date:2022-03-30
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
7SXK
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BU of 7sxk by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - Full Length
Descriptor: Portal protein
Authors:Hou, C.F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-23
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
6VG2
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BU of 6vg2 by Molmil
Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with 16-mer DNA CAGAGGATGTGGCTTC
Descriptor: DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP*GP*CP*TP*TP*C)-3'), Friend leukemia integration 1 transcription factor
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-01-07
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VGG
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BU of 6vgg by Molmil
Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), and mithramycin, in complex with 16mer DNA CAGAGGATGTGGCTTC
Descriptor: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2020-01-08
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.31 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
5JW0
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BU of 5jw0 by Molmil
Crystal structure of mithramycin analogue MTM SA-Phe in complex with a 10-mer DNA AGGGTACCCT
Descriptor: DNA (5'-D(P*AP*GP*GP*GP*TP*AP*CP*CP*CP*T)-3'), Plicamycin, mithramycin analogue MTM SA-Phe, ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2016-05-11
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of mithramycin analogues bound to DNA and implications for targeting transcription factor FLI1.
Nucleic Acids Res., 44, 2016
5JW2
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BU of 5jw2 by Molmil
Crystal structure of mithramycin analogue MTM SA-Phe in complex with a 10-mer DNA AGGGATCCCT
Descriptor: DNA (5'-D(*AP*GP*GP*GP*AP*TP*CP*CP*CP*T)-3'), Plicamycin, mithramycin analogue MTM SA-Phe, ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2016-05-11
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of mithramycin analogues bound to DNA and implications for targeting transcription factor FLI1.
Nucleic Acids Res., 44, 2016
7SYA
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BU of 7sya by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - Full Length
Descriptor: Portal protein
Authors:Hou, C.F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-11-24
Release date:2022-04-20
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
6VGD
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BU of 6vgd by Molmil
Crystal structure of the DNA binding domain (DBD) of human FLI1 and the complex of the DBD of human Runx2 with core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
Descriptor: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-01-07
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VGE
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BU of 6vge by Molmil
Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
Descriptor: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-01-07
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.25 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VG8
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BU of 6vg8 by Molmil
Crystal structure of the DNA binding domains of human FLI1 and Runx2 in complex with 16-mer DNA CAGAGGATGTGGCTTC
Descriptor: DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), Friend leukemia integration 1 transcription factor, ...
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-01-07
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.31 Å)
Cite:Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
5E8G
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BU of 5e8g by Molmil
Crystal structure of the DNA binding domain of human transcription factor FLI1
Descriptor: COBALT (II) ION, Friend leukemia integration 1 transcription factor
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2015-10-14
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Dimerization and DNA Binding of Transcription Factor FLI1.
Biochemistry, 54, 2015
4Z2Y
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BU of 4z2y by Molmil
Crystal structure of methyltransferase CalO6
Descriptor: CalO6, MERCURY (II) ION
Authors:Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2015-03-30
Release date:2015-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of O-methyltransferase CalO6 from the calicheamicin biosynthetic pathway: a case of challenging structure determination at low resolution.
Bmc Struct.Biol., 15, 2015

 

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