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PDB: 21 results

5OJW
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S. cerevisiae UBC13 - MMs2 complex
Descriptor: Ubiquitin-conjugating enzyme E2 13, Ubiquitin-conjugating enzyme variant MMS2
Authors:Sharon, I, Rathi, R, Levin-Kravets, O, Attali, I, Prag, G.
Deposit date:2017-07-24
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:S. cerevisiae UBC13 - MMs2 complex
To Be Published
8DQM
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Crystal structure of isoaspartyl aminopeptidase from Roseivivax halodurans DSM 15395
Descriptor: Isoaspartyl aminopeptidase, SODIUM ION
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-07-19
Release date:2023-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Bioinformatics of cyanophycin metabolism genes and characterization of promiscuous isoaspartyl dipeptidases that catalyze the final step of cyanophycin degradation.
Sci Rep, 13, 2023
8DQN
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Crystal structure of isoaspartyl dipeptidase from Leucothrix mucor DSM2157
Descriptor: GLYCEROL, Isoaspartyl dipeptidase, PHOSPHATE ION, ...
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-07-19
Release date:2023-04-26
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bioinformatics of cyanophycin metabolism genes and characterization of promiscuous isoaspartyl dipeptidases that catalyze the final step of cyanophycin degradation.
Sci Rep, 13, 2023
8EIP
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Crystal structure of cyanophycin dipeptide hydrolase CphZ E251A from Acinetobacter baylyi DSM587 in complex with beta-Asp-Arg
Descriptor: (2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid, MANGANESE (II) ION, Succinylglutamate desuccinylase, ...
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-09-15
Release date:2023-03-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Discovery of cyanophycin dipeptide hydrolase enzymes suggests widespread utility of the natural biopolymer cyanophycin.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EIN
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Crystal structure of WT cyanophycin dipeptide hydrolase CphZ from Acinetobacter baylyi DSM587
Descriptor: MANGANESE (II) ION, Succinylglutamate desuccinylase, ZINC ION
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-09-15
Release date:2023-03-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of cyanophycin dipeptide hydrolase enzymes suggests widespread utility of the natural biopolymer cyanophycin.
Proc.Natl.Acad.Sci.USA, 120, 2023
7TXV
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Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 E82Q with ATP and 16x(Asp-Arg)
Descriptor: 16x(Asp-Arg), ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, ...
Authors:Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
Deposit date:2022-02-09
Release date:2022-06-01
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A cryptic third active site in cyanophycin synthetase creates primers for polymerization
Nat Commun, 13, 2022
7TXU
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Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ATP and 16x(Asp-Arg)
Descriptor: 16x(Asp-Arg), ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, ...
Authors:Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
Deposit date:2022-02-09
Release date:2022-06-01
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A cryptic third active site in cyanophycin synthetase creates primers for polymerization
Nat Commun, 13, 2022
7LGQ
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Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ATP and 8x(Asp-Arg)-Asn
Descriptor: 8x(Asp-Arg)-Asn, ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, ...
Authors:Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
Deposit date:2021-01-20
Release date:2021-08-18
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7UQW
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PCC6803 Cyanophycinase S132DAP covalently bound to cyanophycin dimer
Descriptor: (2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid, Cyanophycinase, FORMAMIDE, ...
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-04-20
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of cyanophycinase in complex with a cyanophycin degradation intermediate.
Biochim Biophys Acta Gen Subj, 1866, 2022
7LG5
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Synechocystis sp. UTEX2470 Cyanophycin synthetase 1 with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, MAGNESIUM ION
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2021-01-19
Release date:2021-08-18
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LGJ
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BU of 7lgj by Molmil
Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ADPCP and 8x(Asp-Arg)-NH2
Descriptor: 8x(Asp-Arg)-NH2, Cyanophycin synthase, MAGNESIUM ION, ...
Authors:Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
Deposit date:2021-01-20
Release date:2021-08-18
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LGM
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Cyanophycin synthetase from A. baylyi DSM587 with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase
Authors:Sharon, I, Haque, A.S, Lahiri, I, Leschziner, A, Schmeing, T.M.
Deposit date:2021-01-20
Release date:2021-08-18
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LGN
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Cyanophycin synthetase 1 from T. morbirosei
Descriptor: Cyanophycin synthase
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2021-01-20
Release date:2021-08-18
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7TA5
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BU of 7ta5 by Molmil
Crystal structure of cyanophycin synthetase 2 from Gloeothece citriformis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, D(-)-TARTARIC ACID, ...
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2021-12-20
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and Function of the beta-Asp-Arg Polymerase Cyanophycin Synthetase 2.
Acs Chem.Biol., 17, 2022
7UQV
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BU of 7uqv by Molmil
Pseudobacteroides cellulosolvens pseudo-CphB
Descriptor: Cyanophycinase
Authors:Sharon, I, Schmeing, T.M.
Deposit date:2022-04-20
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of cyanophycinase in complex with a cyanophycin degradation intermediate.
Biochim Biophys Acta Gen Subj, 1866, 2022
7LY4
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BU of 7ly4 by Molmil
Cryo-EM structure of the elongation module of the bacillamide NRPS, BmdB, in complex with the oxidase, BmdC
Descriptor: BmdB, bacillamide NRPS, BmdC, ...
Authors:Sharon, I, Fortinez, C.M, Schmeing, T.M.
Deposit date:2021-03-05
Release date:2022-02-02
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures and function of a tailoring oxidase in complex with a nonribosomal peptide synthetase module.
Nat Commun, 13, 2022
7MLG
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BU of 7mlg by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) Covalently Bound to Compound C63
Descriptor: (2R)-2-[(4-tert-butylphenyl)(ethanesulfonyl)amino]-N-cyclohexyl-2-(pyridin-3-yl)acetamide, 3C-like proteinase
Authors:Sharon, I, Stille, J, Tjutrins, J, Wang, G, Venegas, F.A, Hennecker, C, Rueda, A.M, Miron, C.E, Pinus, S, Labarre, A, Patrascu, M.B, Vlaho, D, Huot, M, Mittermaier, A.K, Moitessier, N, Schmeing, T.M.
Deposit date:2021-04-28
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design, synthesis and in vitro evaluation of novel SARS-CoV-2 3CL pro covalent inhibitors.
Eur.J.Med.Chem., 229, 2021
7MLF
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BU of 7mlf by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) Covalently Bound to Compound C7
Descriptor: 3C-like proteinase, N-(4-tert-butylphenyl)-2-chloro-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]acetamide
Authors:Sharon, I, Stille, J, Tjutrins, J, Wang, G, Venegas, F.A, Hennecker, C, Rueda, A.M, Miron, C.E, Pinus, S, Labarre, A, Patrascu, M.B, Vlaho, D, Huot, M, Mittermaier, A.K, Moitessier, N, Schmeing, T.M.
Deposit date:2021-04-28
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design, synthesis and in vitro evaluation of novel SARS-CoV-2 3CL pro covalent inhibitors.
Eur.J.Med.Chem., 229, 2021
8FXI
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BU of 8fxi by Molmil
Cryo-EM structure of Stanieria sp. CphA2 in complex with ADPCP and 4x(beta-Asp-Arg)
Descriptor: 1-[(4-aminopyrimidin-5-yl)amino]-2,5-anhydro-1-deoxy-6-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]-D-allitol, 4x(beta-Asp-Arg), MAGNESIUM ION, ...
Authors:Markus, L.M, Sharon, I, Strauss, M, Schmeing, T.M.
Deposit date:2023-01-24
Release date:2023-06-14
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and function of a hexameric cyanophycin synthetase 2.
Protein Sci., 32, 2023
8FXH
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BU of 8fxh by Molmil
Cryo-EM structure of Stanieria sp. CphA2
Descriptor: RimK domain-containing protein ATP-grasp
Authors:Markus, L.M, Sharon, I, Strauss, M, Schmeing, T.M.
Deposit date:2023-01-24
Release date:2023-06-14
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure and function of a hexameric cyanophycin synthetase 2.
Protein Sci., 32, 2023
7LY7
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BU of 7ly7 by Molmil
Crystal structure of the elongation module of the bacillamide NRPS, BmdB, in complex with the oxidase BmdC
Descriptor: 5'-{[(2R,3S)-3-amino-2-({2-[(N-{(2R)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-4-sulfanylbutane-1-sulfonyl]amino}-5'-deoxyadenosine, BmdB, Bacillamide NRPS, ...
Authors:Fortinez, C.M, Sharon, I, Schmeing, T.M.
Deposit date:2021-03-05
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structures and function of a tailoring oxidase in complex with a nonribosomal peptide synthetase module.
Nat Commun, 13, 2022

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