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2I56
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BU of 2i56 by Molmil
Crystal structure of L-Rhamnose Isomerase from Pseudomonas stutzeri with L-Rhamnose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, ZINC ION
著者Yoshida, H, Yamada, M, Takada, G, Izumori, K, Kamitori, S.
登録日2006-08-24
公開日2006-12-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The Structures of l-Rhamnose Isomerase from Pseudomonas stutzeri in Complexes with l-Rhamnose and d-Allose Provide Insights into Broad Substrate Specificity
J.Mol.Biol., 365, 2007
7LGJ
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BU of 7lgj by Molmil
Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ADPCP and 8x(Asp-Arg)-NH2
分子名称: 8x(Asp-Arg)-NH2, Cyanophycin synthase, MAGNESIUM ION, ...
著者Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
登録日2021-01-20
公開日2021-08-18
最終更新日2021-10-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
5LNH
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BU of 5lnh by Molmil
Structure of full length Unliganded CodY from Bacillus subtilis
分子名称: GTP-sensing transcriptional pleiotropic repressor CodY, SULFATE ION
著者Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
登録日2016-08-04
公開日2017-01-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
7E17
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BU of 7e17 by Molmil
Structure of dimeric uPAR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Urokinase plasminogen activator surface receptor
著者Cai, Y, Huang, M.
登録日2021-02-01
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Crystal structure and cellular functions of uPAR dimer
Nat Commun, 13, 2022
7C39
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BU of 7c39 by Molmil
Crystal structure of AofleA from Arthrobotrys oligospora in complex with methylated L-fucose
分子名称: AoflcA, CITRIC ACID, GLYCEROL, ...
著者Liu, M, Cheng, X, Wang, J, Zhang, M, Wang, M.
登録日2020-05-11
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora.
Int.J.Biol.Macromol., 164, 2020
3J1W
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BU of 3j1w by Molmil
A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
分子名称: Protein PrgH
著者Sgourakis, N.G, Worrall, L.J, Strynadka, N.C.J, Baker, D.
登録日2012-07-10
公開日2013-05-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013
7LME
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BU of 7lme by Molmil
SARS-CoV-2 3CLPro in complex with N-[4-[[2-(benzotriazol-1-yl)acetyl]-(3-thienylmethyl)amino]phenyl]cyclopropanecarboxamide
分子名称: 3C-like proteinase, ~{N}-[4-[2-(benzotriazol-1-yl)ethanoyl-(thiophen-3-ylmethyl)amino]phenyl]cyclopropanecarboxamide
著者Goins, C.M, Arya, T, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
5LOK
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BU of 5lok by Molmil
X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with cytidine and cytosine at 1.11 A resolution
分子名称: 1,2-ETHANEDIOL, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, 6-AMINOPYRIMIDIN-2(1H)-ONE, ...
著者Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Dontsova, M.V, Betzel, C, Mikhailov, A.M.
登録日2016-08-09
公開日2017-08-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.109 Å)
主引用文献X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with cytidine and cytosine at 1.11 A resolution
To Be Published
2HYB
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BU of 2hyb by Molmil
Crystal Structure of Hexameric DsrEFH
分子名称: DsrH, Intracellular sulfur oxidation protein dsrF, Putative sulfurtransferase dsrE
著者Shin, D.H, Connie, H, Schulte, A, Dahl, C, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2006-08-04
公開日2007-07-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of hexameric DsrEFH
To be Published
7LGU
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BU of 7lgu by Molmil
Structure of human prestin in the presence of NaCl
分子名称: CHLORIDE ION, CHOLESTEROL, DECANE, ...
著者Ge, J, Gouaux, E.
登録日2021-01-21
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Molecular mechanism of prestin electromotive signal amplification.
Cell, 184, 2021
7E7F
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BU of 7e7f by Molmil
Human CYP11B1 mutant in complex with metyrapone
分子名称: CHOLIC ACID, Cytochrome P450 11B1, mitochondrial, ...
著者Mukai, K, Sugimoto, H, Reiko, S, Matsuura, T, Hishiki, T, Kagawa, N.
登録日2021-02-26
公開日2022-01-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Spatially restricted substrate-binding site of cortisol-synthesizing CYP11B1 limits multiple hydroxylations and hinders aldosterone synthesis.
Curr Res Struct Biol, 3, 2021
2I8U
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BU of 2i8u by Molmil
GDP-mannose mannosyl hydrolase-calcium-GDP product complex
分子名称: CALCIUM ION, GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE
著者Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
登録日2006-09-03
公開日2007-06-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
7EA2
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BU of 7ea2 by Molmil
crystal structure of NAP1 FIR in complex with RB1CC1 Claw domain
分子名称: 5-azacytidine-induced protein 2,RB1-inducible coiled-coil protein 1, CITRATE ANION, DI(HYDROXYETHYL)ETHER, ...
著者Fu, T, Pan, L.
登録日2021-03-06
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural and biochemical advances on the recruitment of the autophagy-initiating ULK and TBK1 complexes by autophagy receptor NDP52.
Sci Adv, 7, 2021
3BGP
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BU of 3bgp by Molmil
Human Pim-1 complexed with a benzoisoxazole inhibitor VX1
分子名称: 4-[3-(4-chlorophenyl)-2,1-benzisoxazol-5-yl]pyrimidin-2-amine, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Jacobs, M.D.
登録日2007-11-27
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Docking study yields four novel inhibitors of the protooncogene pim-1 kinase.
J.Med.Chem., 51, 2008
5LQP
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BU of 5lqp by Molmil
Cryo-EM reconstruction of bacteriophage AP205 virus-like particles.
分子名称: Coat protein
著者Diebolder, C.A, Rumnieks, J, Tars, K, Koning, R.I.
登録日2016-08-17
公開日2016-12-14
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structure of AP205 Coat Protein Reveals Circular Permutation in ssRNA Bacteriophages.
J. Mol. Biol., 428, 2016
3K90
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BU of 3k90 by Molmil
The Abscisic acid receptor PYR1 in complex with Abscisic Acid
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ACETIC ACID, GLYCEROL, ...
著者Dupeux, F.D, Santiago, J, Rodriguez, P.L, Marquez, J.A.
登録日2009-10-15
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The abscisic acid receptor PYR1 in complex with abscisic acid.
Nature, 462, 2009
2ON6
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BU of 2on6 by Molmil
Crystal structure of human purine nucleoside phosphorylase mutant H257F with Imm-H
分子名称: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, Purine nucleoside phosphorylase
著者Rinaldo-Matthis, A, Murkin, A.S, Almo, S.C, Schramm, V.L.
登録日2007-01-23
公開日2007-05-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase
Biochemistry, 46, 2007
7E9Y
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BU of 7e9y by Molmil
Crystal structure of eLACCO1
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, CALCIUM ION, Lactate-binding periplasmic protein TTHA0766,Lactate-binding periplasmic protein TTHA0766
著者Wen, Y, Campbell, R.E, Lemieux, M.J, Nasu, Y.
登録日2021-03-05
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A genetically encoded fluorescent biosensor for extracellular L-lactate.
Nat Commun, 12, 2021
2OM0
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BU of 2om0 by Molmil
Structure of human insulin in presence of urea at pH 6.5
分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ...
著者Norrman, M, Schluckebier, G.
登録日2007-01-20
公開日2007-12-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH.
Bmc Struct.Biol., 7, 2007
5LVD
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BU of 5lvd by Molmil
Thermolysin in complex with inhibitor (JC67)
分子名称: (2~{S})-4-methyl-2-[[(2~{S})-3-oxidanyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]propanoyl]amino]pentanoic acid, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Krimmer, S.G, Cramer, J, Heine, A, Klebe, G.
登録日2016-09-14
公開日2017-08-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献How Nothing Boosts Affinity: Hydrophobic Ligand Binding to the Virtually Vacated S1' Pocket of Thermolysin.
J. Am. Chem. Soc., 139, 2017
2I1D
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BU of 2i1d by Molmil
DPC micelle-bound NMR structures of Tritrp1
分子名称: 13-mer from Prophenin-1 containing WWW
著者Schibli, D.J, Nguyen, L.T.
登録日2006-08-14
公開日2006-11-28
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structure-function analysis of tritrpticin analogs: potential relationships between antimicrobial activities, model membrane interactions, and their micelle-bound NMR structures
Biophys.J., 91, 2006
3J3X
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BU of 3j3x by Molmil
Independent reconstruction of Mm-cpn cryo-EM density map from half dataset in the closed state (training map)
分子名称: Chaperonin
著者DiMaio, F, Zhang, J, Chiu, W, Baker, D.
登録日2013-05-02
公開日2013-05-29
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM model validation using independent map reconstructions.
Protein Sci., 22, 2013
2ONC
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BU of 2onc by Molmil
Crystal structure of human DPP-4
分子名称: 2-({2-[(3R)-3-AMINOPIPERIDIN-1-YL]-4-OXOQUINAZOLIN-3(4H)-YL}METHYL)BENZONITRILE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Feng, J, Zhang, Z, Wallace, M.B, Stafford, J.A, Kaldor, S.W, Kassel, D.B, Navre, M, Shi, L, Skene, R.J, Asakawa, T, Takeuchi, K, Xu, R, Webb, D.R, Gwaltney, S.L.
登録日2007-01-23
公開日2008-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Discovery of alogliptin: a potent, selective, bioavailable, and efficacious inhibitor of dipeptidyl peptidase IV.
J.Med.Chem., 50, 2007
7DU4
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BU of 7du4 by Molmil
The structure of the M.tb MazF-mt9 toxin in complex with a fragment of cognate antitoxin
分子名称: Probable endoribonuclease MazF7, peptide
著者Xie, W, Chen, R.
登録日2021-01-08
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Mechanistic Insight into the Peptide Binding Modes to Two M. tb MazF Toxins.
Toxins, 13, 2021
2OOV
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Crystal Structure of Hansenula polymorpha amine oxidase to 1.7 Angstroms
分子名称: COPPER (II) ION, GLYCEROL, PHOSPHATE ION, ...
著者Johnson, B.J, Wilmot, C.M.
登録日2007-01-26
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Exploring molecular oxygen pathways in Hansenula polymorpha copper-containing amine oxidase
J.Biol.Chem., 282, 2007

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