Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HD0
DownloadVisualize
BU of 3hd0 by Molmil
Crystal structure of Tm1865, an Endonuclease V from Thermotoga Maritima
分子名称: Endonuclease V
著者Utepbergenov, D, Cooper, D.R, Derewenda, U, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
登録日2009-05-06
公開日2009-07-14
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Tm1865, an Endonuclease V from Thermotoga Maritima
To be Published
6ES7
DownloadVisualize
BU of 6es7 by Molmil
Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins
分子名称: CREB-binding protein, Nuclear receptor coactivator 3
著者Chi, N.C.
登録日2017-10-19
公開日2018-10-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins.
Sci Adv, 4, 2018
7WUB
DownloadVisualize
BU of 7wub by Molmil
Cryo-EM structure of dodecamer P97
分子名称: 3-[3-cyclopentylsulfanyl-5-[[3-methyl-4-(4-methylsulfonylphenyl)phenoxy]methyl]-1,2,4-triazol-4-yl]pyridine, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Liu, S, Wang, T.
登録日2022-02-08
公開日2022-03-23
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of dodecamer P97 at 2.99 Angstroms resolution
To Be Published
4FZV
DownloadVisualize
BU of 4fzv by Molmil
Crystal structure of the human MTERF4:NSUN4:SAM ternary complex
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Putative methyltransferase NSUN4, ...
著者Guja, K.E, Yakubovskaya, E, Mejia, E, Castano, S, Hambardjieva, E, Choi, W.S, Garcia-Diaz, M.
登録日2012-07-08
公開日2012-10-03
最終更新日2012-11-28
実験手法X-RAY DIFFRACTION (1.9996 Å)
主引用文献Structure of the Essential MTERF4:NSUN4 Protein Complex Reveals How an MTERF Protein Collaborates to Facilitate rRNA Modification.
Structure, 20, 2012
6ES6
DownloadVisualize
BU of 6es6 by Molmil
Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins
分子名称: CID, NCBD
著者Chi, N.C.
登録日2017-10-19
公開日2018-10-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins.
Sci Adv, 4, 2018
2EO0
DownloadVisualize
BU of 2eo0 by Molmil
Crystal Structure of Holliday Junction Resolvase ST1444
分子名称: Hypothetical protein ST1444
著者Sarai, N, Kagawa, W, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-28
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Holliday Junction Resolvase ST1444
To be published
3GA2
DownloadVisualize
BU of 3ga2 by Molmil
Crystal structure of the Endonuclease_V (BSU36170) from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR624
分子名称: Endonuclease V
著者Forouhar, F, Abashidze, M, Hussain, M, Seetharaman, J, Janjua, H, Fang, Y, Xiao, R, Cunningham, K, Ma, L.-C, Owens, L, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-02-16
公開日2009-02-24
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Endonuclease_V (BSU36170) from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR624
To be Published
4DQM
DownloadVisualize
BU of 4dqm by Molmil
Revealing a marine natural product as a novel agonist for retinoic acid receptors with a unique binding mode and antitumor activity
分子名称: (5S)-4-[(3E,7E)-4,8-dimethyl-10-(2,6,6-trimethylcyclohex-1-en-1-yl)deca-3,7-dien-1-yl]-5-hydroxyfuran-2(5H)-one, Nuclear receptor coactivator 1, Retinoic acid receptor alpha
著者Wang, S, Wang, Z, Lin, S, Zheng, W, Wang, R, Jin, S, Chen, J, Jin, L, Li, Y.
登録日2012-02-16
公開日2012-10-03
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Revealing a natural marine product as a novel agonist for retinoic acid receptors with a unique binding mode and inhibitory effects on cancer cells.
Biochem.J., 446, 2012
6ES5
DownloadVisualize
BU of 6es5 by Molmil
Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins
分子名称: CID, NCBD
著者Chi, N.C.
登録日2017-10-19
公開日2018-10-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins.
Sci Adv, 4, 2018
6AOC
DownloadVisualize
BU of 6aoc by Molmil
Crystal Structure of an N-Hydroxythienopyrimidine-2,4-dione RNase H Active Site Inhibitor with Multiple Binding Modes to HIV Reverse Transcriptase
分子名称: 1,2-ETHANEDIOL, 6-benzyl-3-hydroxythieno[2,3-d]pyrimidine-2,4(1H,3H)-dione, MANGANESE (II) ION, ...
著者Kirby, K.A, Sarafianos, S.G.
登録日2017-08-15
公開日2018-08-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design, synthesis and biological evaluations of N-Hydroxy thienopyrimidine-2,4-diones as inhibitors of HIV reverse transcriptase-associated RNase H.
Eur J Med Chem, 141, 2017
2XK9
DownloadVisualize
BU of 2xk9 by Molmil
Structural analysis of checkpoint kinase 2 (Chk2) in complex with inhibitor PV1533
分子名称: CHECKPOINT KINASE 2, N-{4-[(1E)-N-(N-hydroxycarbamimidoyl)ethanehydrazonoyl]phenyl}-7-nitro-1H-indole-2-carboxamide
著者Lountos, G.T, Jobson, A.G, Tropea, J.E, Self, C, Shoemaker, R.H, Pommier, Y, Waugh, D.S.
登録日2010-07-07
公開日2011-07-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Characterization of Inhibitor Complexes with Checkpoint Kinase 2 (Chk2), a Drug Target for Cancer Therapy.
J.Struct.Biol., 176, 2011
6IAM
DownloadVisualize
BU of 6iam by Molmil
Modulating Protein-Protein Interactions with Visible Light Peptide Backbone Switches
分子名称: POTASSIUM ION, SER-ALA-ARG-ALA-XY5-VAL-HIS-LEU-ARG-LYS-SER-ALA, SODIUM ION, ...
著者Werel, L, Essen, L.-O.
登録日2018-11-27
公開日2019-02-06
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Modulating Protein-Protein Interactions with Visible-Light-Responsive Peptide Backbone Photoswitches.
Chembiochem, 20, 2019
2JK3
DownloadVisualize
BU of 2jk3 by Molmil
CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY GSSGSSG LINKER
分子名称: HEMOLYSIN II REGULATORY PROTEIN, SULFATE ION
著者Kovalevskiy, O.V, Solonin, A.S, Antson, A.A.
登録日2008-08-11
公開日2008-08-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Investigation of Transcriptional Regulator Hlyiir: Influence of a Disordered Region on Protein Fold and Dimerization.
Proteins, 78, 2010
5OGB
DownloadVisualize
BU of 5ogb by Molmil
Human Cellular Retinoic Acid Binding Protein II (CRABPII) with bound synthetic retinoid DC360.
分子名称: 4-[2-(4,4-dimethyl-1-propan-2-yl-quinolin-6-yl)ethynyl]benzoic acid, Cellular retinoic acid-binding protein 2
著者Chisholm, D, Tomlinson, C, Whiting, A, Pohl, E.
登録日2017-07-12
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fluorescent Retinoic Acid Analogues as Probes for Biochemical and Intracellular Characterization of Retinoid Signaling Pathways.
Acs Chem.Biol., 14, 2019
3BYH
DownloadVisualize
BU of 3byh by Molmil
Model of actin-fimbrin ABD2 complex
分子名称: Actin, fimbrin ABD2
著者Galkin, V.E, Orlova, A, Cherepanova, O, Lebart, M.C, Egelman, E.H.
登録日2008-01-16
公開日2008-02-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献High-resolution cryo-EM structure of the F-actin-fimbrin/plastin ABD2 complex.
Proc.Natl.Acad.Sci.Usa, 105, 2008
7X4U
DownloadVisualize
BU of 7x4u by Molmil
Crystal structure of ERK2 with an allosteric inhibitor 2
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Yoshida, M, Kinoshita, T.
登録日2022-03-03
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural basis for producing allosteric ERK2 inhibitors
To Be Published
3D55
DownloadVisualize
BU of 3d55 by Molmil
Crystal structure of M. tuberculosis YefM antitoxin
分子名称: SULFATE ION, Uncharacterized protein Rv3357/MT3465
著者Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
登録日2008-05-15
公開日2008-12-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
7XC1
DownloadVisualize
BU of 7xc1 by Molmil
Crystal structure of ERK2 with an allosteric inhibitor 3
分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Yoshida, M, Kinoshita, T.
登録日2022-03-22
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis for ERK2 allosteric inhibitors.
To Be Published
4DQ2
DownloadVisualize
BU of 4dq2 by Molmil
Structure of staphylococcus aureus biotin protein ligase in complex with biotinol-5'-amp
分子名称: ((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHYL 5-((3AS,4S,6AR)-2-OXO-HEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL)PENTYL HYDROGEN PHOSPHATE, Biotin-[acetyl-CoA-carboxylase] ligase
著者Wilce, M, Yap, M, Pendini, N, Soares de Costa, T, Polyak, S, Tieu, W, Booker, G, Wallace, J.
登録日2012-02-14
公開日2012-04-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Selective inhibition of biotin protein ligase from Staphylococcus aureus.
J.Biol.Chem., 287, 2012
3CTO
DownloadVisualize
BU of 3cto by Molmil
Crystal Structure of M. tuberculosis YefM antitoxin
分子名称: SULFATE ION, Uncharacterized protein Rv3357/MT3465
著者Kumar, P, Issac, B, Dodson, E.J, Turkenberg, J.P, Mande, S.C.
登録日2008-04-14
公開日2008-12-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein
J.Mol.Biol., 383, 2008
2Z1I
DownloadVisualize
BU of 2z1i by Molmil
Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K)
分子名称: Ribonuclease HI
著者You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-08
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues
J.Biochem.(Tokyo), 142, 2007
2Z1J
DownloadVisualize
BU of 2z1j by Molmil
Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K)
分子名称: Ribonuclease HI
著者You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-08
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues
J.Biochem.(Tokyo), 142, 2007
5QXJ
DownloadVisualize
BU of 5qxj by Molmil
PanDDA analysis group deposition -- Crystal Structure of ATAD2 in complex with PC578
分子名称: (3aS,8S,9aS)-10-methyl-4-oxo-1,4,6,8,9,9a-hexahydro-3a,8-epiminocyclohepta[1,2-c:4,5-c']dipyrrole-2(3H)-carbaldehyde, 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, ...
著者Snee, M, Talon, R, Fowley, D, Collins, P, Nelson, A, Arrowsmith, C.H, Bountra, C, Edwards, A, Von-Delft, F.
登録日2020-02-11
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献PanDDA analysis group deposition - Bromodomain of human ATAD2 fragment screening
To Be Published
5QXI
DownloadVisualize
BU of 5qxi by Molmil
PanDDA analysis group deposition -- Crystal Structure of ATAD2 in complex with PC587
分子名称: (4R,4aR,7aS,9R)-3,10-dimethyl-5,6,7,7a,8,9-hexahydro-4H-4a,9-epiminopyrrolo[3',4':5,6]cyclohepta[1,2-d][1,2]oxazol-4-ol, (4R,4aS,7aS,9S)-3,10-dimethyl-5,6,7,7a,8,9-hexahydro-4H-4a,9-epiminopyrrolo[3',4':5,6]cyclohepta[1,2-d][1,2]oxazol-4-ol, 1,2-ETHANEDIOL, ...
著者Snee, M, Talon, R, Fowley, D, Collins, P, Nelson, A, Arrowsmith, C.H, Bountra, C, Edwards, A, Von-Delft, F.
登録日2020-02-11
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献PanDDA analysis group deposition - Bromodomain of human ATAD2 fragment screening
To Be Published
5QXK
DownloadVisualize
BU of 5qxk by Molmil
PanDDA analysis group deposition -- Crystal Structure of ATAD2 in complex with PC581
分子名称: (3aS,8S,9aS)-2-acetyl-10-methyl-2,3,6,8,9,9a-hexahydro-3a,8-epiminocyclohepta[1,2-c:4,5-c']dipyrrol-4(1H)-one, 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, ...
著者Snee, M, Talon, R, Fowley, D, Collins, P, Nelson, A, Arrowsmith, C.H, Bountra, C, Edwards, A, Von-Delft, F.
登録日2020-02-11
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献PanDDA analysis group deposition - Bromodomain of human ATAD2 fragment screening
To Be Published

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon