Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3E8K
DownloadVisualize
BU of 3e8k by Molmil
Crystal structure of HK97 Prohead II
分子名称: Major capsid protein
著者Gertsman, I, Speir, J, Johnson, J.E.
登録日2008-08-20
公開日2009-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献An unexpected twist in viral capsid maturation.
Nature, 458, 2009
3DSC
DownloadVisualize
BU of 3dsc by Molmil
Crystal structure of P. furiosus Mre11 DNA synaptic complex
分子名称: DNA (5'-D(P*DCP*DAP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DTP*DTP*DGP*DCP*DTP*DTP*DGP*DTP*DGP*DAP*DC)-3'), DNA double-strand break repair protein mre11
著者Williams, R.S, Moncalian, G, Shin, D.S, Tainer, J.A.
登録日2008-07-11
公開日2008-10-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair.
Cell(Cambridge,Mass.), 135, 2008
3DAB
DownloadVisualize
BU of 3dab by Molmil
Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain
分子名称: Cellular tumor antigen p53, Mdm4 protein
著者Popowicz, G.M, Czarna, A, Holak, T.A.
登録日2008-05-29
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain.
Cell Cycle, 7, 2008
4RQI
DownloadVisualize
BU of 4rqi by Molmil
Structure of TRF2/RAP1 secondary interaction binding site
分子名称: GLYCEROL, MAGNESIUM ION, Telomeric repeat-binding factor 2, ...
著者Miron, S, Guimaraes, B, Gaullier, G, Giraud-Panis, M.-J, Gilson, E, Le Du, M.-H.
登録日2014-11-03
公開日2016-02-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4405 Å)
主引用文献A higher-order entity formed by the flexible assembly of RAP1 with TRF2.
Nucleic Acids Res., 44, 2016
1HJ3
DownloadVisualize
BU of 1hj3 by Molmil
Cytochrome cd1 Nitrite Reductase, dioxygen complex
分子名称: GLYCEROL, HEME C, HEME D, ...
著者Sjogren, T, Hajdu, J.
登録日2001-01-08
公開日2001-01-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
1IH9
DownloadVisualize
BU of 1ih9 by Molmil
NMR Structure of Zervamicin IIB (peptaibol antibiotic) Bound to DPC Micelles
分子名称: ZERVAMICIN IIB
著者Shenkarev, Z.O, Balasheva, T.A, Efremov, R.G, Yakimenko, Z.A, Ovchinnikova, T.V, Raap, J, Arseniev, A.S.
登録日2001-04-19
公開日2002-02-13
最終更新日2012-12-12
実験手法SOLUTION NMR
主引用文献Spatial Structure of Zervamicin Iib Bound to Dpc Micelles: Implications for Voltage-Gating.
Biophys.J., 82, 2002
2DKH
DownloadVisualize
BU of 2dkh by Molmil
Crystal structure of 3-hydroxybenzoate hydroxylase from Comamonas testosteroni, in complex with the substrate
分子名称: 3-HYDROXYBENZOIC ACID, 3-hydroxybenzoate hydroxylase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Hiromoto, T, Fujiwara, S, Hosokawa, K, Yamaguchi, H.
登録日2006-04-11
公開日2006-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of 3-hydroxybenzoate hydroxylase from Comamonas testosteroni has a large tunnel for substrate and oxygen access to the active site
J.Mol.Biol., 364, 2006
5GOX
DownloadVisualize
BU of 5gox by Molmil
Eukaryotic Rad50 Functions as A Rod-shaped Dimer
分子名称: DNA repair protein RAD50, GLYCEROL, ZINC ION
著者Park, Y.B, Hohl, M, Padjasek, M, Jeong, E, Jin, K.S, Krezel, A, Petrini, J.H.J, Cho, Y.
登録日2016-07-30
公開日2017-02-01
最終更新日2017-03-15
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Eukaryotic Rad50 functions as a rod-shaped dimer
Nat. Struct. Mol. Biol., 24, 2017
1HJ5
DownloadVisualize
BU of 1hj5 by Molmil
Cytochrome cd1 Nitrite Reductase, reoxidised enzyme
分子名称: GLYCEROL, HEME C, HEME D, ...
著者Sjogren, T, Hajdu, J.
登録日2001-01-08
公開日2001-01-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
1HJ4
DownloadVisualize
BU of 1hj4 by Molmil
Cytochrome cd1 Nitrite Reductase, x-ray reduced dioxygen complex
分子名称: GLYCEROL, HEME C, HEME D, ...
著者Sjogren, T, Hajdu, J.
登録日2001-01-08
公開日2001-01-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
5HPD
DownloadVisualize
BU of 5hpd by Molmil
Solution Structure of TAZ2-p53TAD
分子名称: CREB-binding protein,Cellular tumor antigen p53 fusion protein, ZINC ION
著者Krois, A.S, Ferreon, J.C, Martinez-Yamout, M.A, Dyson, H.J, Wright, P.E.
登録日2016-01-20
公開日2016-03-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Recognition of the disordered p53 transactivation domain by the transcriptional adapter zinc finger domains of CREB-binding protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HOU
DownloadVisualize
BU of 5hou by Molmil
Solution Structure of p53TAD-TAZ1
分子名称: Cellular tumor antigen p53,CREB-binding protein fusion protein, ZINC ION
著者Krois, A.S, Ferreon, J.C, Martinez-Yamout, M.A, Dyson, H.J, Wright, P.E.
登録日2016-01-19
公開日2016-03-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Recognition of the disordered p53 transactivation domain by the transcriptional adapter zinc finger domains of CREB-binding protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
1LB7
DownloadVisualize
BU of 1lb7 by Molmil
IGF-F1-1, A PEPTIDE ANTAGONIST OF IGF-1
分子名称: IGF-1 ANTAGONIST F1-1
著者Deshayes, K, Schaffer, M.L, Skelton, N.J, Nakamura, G.R, Kadkhodayan, S, Sidhu, S.S.
登録日2002-04-02
公開日2002-06-19
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Rapid identification of small binding motifs with high-throughput phage display: discovery of peptidic antagonists of IGF-1 function.
Chem.Biol., 9, 2002
5GHD
DownloadVisualize
BU of 5ghd by Molmil
SOLUTION STRUCTURE OF LYS39 ACETYLATED HUMAN SUMO1
分子名称: Small ubiquitin-related modifier 1
著者Naik, M.T, Naik, N, Shih, H, Huang, T.
登録日2016-06-19
公開日2017-06-07
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Structures of Human Sumo
To Be Published
2AZM
DownloadVisualize
BU of 2azm by Molmil
Crystal structure of the MDC1 brct repeat in complex with the histone tail of gamma-H2AX
分子名称: GAMMA-H2AX HISTONE, Mediator of DNA damage checkpoint protein 1
著者Clapperton, J.A, Stucki, M, Mohammad, D, Yaffe, M.B, Jackson, S.P, Smerdon, S.J.
登録日2005-09-12
公開日2006-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献MDC1 Directly Binds Phosphorylated Histone H2AX to Regulate Cellular Responses to DNA Double-Strand Breaks
Cell(Cambridge,Mass.), 123, 2005
6Z1C
DownloadVisualize
BU of 6z1c by Molmil
Crystal structure of Arabidopsis thaliana CK2-alpha-1 in complex with TTP-22
分子名称: 3-[5-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]sulfanylpropanoic acid, CHLORIDE ION, Casein kinase II subunit alpha-1
著者Demulder, M, Loris, R, De Veylder, L.
登録日2020-05-13
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Arabidopsis casein kinase 2 triggers stem cell exhaustion under Al toxicity and phosphate deficiency through activating the DNA damage response pathway.
Plant Cell, 33, 2021
8R1G
DownloadVisualize
BU of 8r1g by Molmil
Dimeric ternary structure of E6AP-E6-p53
分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ...
著者Sandate, C.R, Chakrabory, D, Kater, L, Kempf, G, Thoma, N.H.
登録日2023-11-01
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Monomeric E6AP-E6-p53 ternary complex
To Be Published
8R1F
DownloadVisualize
BU of 8r1f by Molmil
Monomeric E6AP-E6-p53 ternary complex
分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ...
著者Sandate, C.R, Chakraborty, D, Kater, L, Kempf, G, Thoma, N.H.
登録日2023-11-01
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Monomeric E6AP-E6-p53 ternary complex
To Be Published
8R62
DownloadVisualize
BU of 8r62 by Molmil
Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition
分子名称: 7-(4,7-diazaspiro[2.5]octan-7-yl)-2-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-1~{H}-pyrido[1,2-a]pyrimidin-4-one, RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
著者Malard, F, Campagne, S.
登録日2023-11-20
公開日2024-03-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design.
Nucleic Acids Res., 52, 2024
4GAC
DownloadVisualize
BU of 4gac by Molmil
High resolution structure of mouse aldehyde reductase (AKR1a4) in its apo-form
分子名称: 1,2-ETHANEDIOL, Alcohol dehydrogenase [NADP(+)], CITRATE ANION
著者Faucher, F, Jia, Z.
登録日2012-07-25
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献High-resolution structure of AKR1a4 in the apo form and its interaction with ligands.
Acta Crystallogr.,Sect.F, 68, 2012
6ZWK
DownloadVisualize
BU of 6zwk by Molmil
Crystal structure of the phosphorylated C-terminal tail of histone H2AX in complex with a specific nanobody (C6 gammaXbody)
分子名称: CHLORIDE ION, Histone H2AX, SODIUM ION, ...
著者McEwen, A.G, Moeglin, E, Desplancq, D, Weiss, E, Poterszman, A.
登録日2020-07-28
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A Novel Nanobody Precisely Visualizes Phosphorylated Histone H2AX in Living Cancer Cells under Drug-Induced Replication Stress.
Cancers (Basel), 13, 2021
7AI0
DownloadVisualize
BU of 7ai0 by Molmil
Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 1)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, ...
著者Magnussen, H.M, Huang, D.T.
登録日2020-09-25
公開日2021-01-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant.
J.Mol.Biol., 433, 2021
7AI1
DownloadVisualize
BU of 7ai1 by Molmil
Crystal structure of human MDM2-G443T RING domain homodimer bound to UbcH5B-Ub (Crystal form 2)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, ...
著者Magnussen, H.M, Huang, D.T.
登録日2020-09-25
公開日2021-01-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Identification of a Catalytic Active but Non-Aggregating MDM2 RING Domain Variant.
J.Mol.Biol., 433, 2021
7AKH
DownloadVisualize
BU of 7akh by Molmil
Structure of DYRK2 in complex with compound 58
分子名称: 4-[3-[(2~{S})-2-(6-bromanylpyridin-2-yl)oxypropyl]-2-methyl-imidazo[4,5-b]pyridin-5-yl]pyridine-2,6-diamine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 2
著者Dokurno, P, Surgenor, A.E, Kotschy, A.
登録日2020-10-01
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure-Guided Discovery of Potent and Selective DYRK1A Inhibitors.
J.Med.Chem., 64, 2021
7AKF
DownloadVisualize
BU of 7akf by Molmil
Structure of DYRK2 in complex with compound 50
分子名称: 4-(2,3-dimethyl-1-benzofuran-5-yl)pyridine-2,6-diamine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 2
著者Dokurno, P, Surgenor, A.E, Kotschy, A.
登録日2020-09-30
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Guided Discovery of Potent and Selective DYRK1A Inhibitors.
J.Med.Chem., 64, 2021

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon