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PDB: 74 件

8WIM
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Crystal structure of Jingmen tick virus RNA-dependent RNA polymerase (D307 construct)
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Jingmen tick virus NSP1, ...
著者Wang, X, Jing, X, Deng, F, Gong, P.
登録日2023-09-24
公開日2024-01-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献A jingmenvirus RNA-dependent RNA polymerase structurally resembles the flavivirus counterpart but with different features at the initiation phase.
Nucleic Acids Res., 52, 2024
8WU3
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BU of 8wu3 by Molmil
Crystal structure of RNA-dependent RNA polymerases from Alongshan virus
分子名称: RNA polymerase
著者Liu, Z.Y, Han, P, Peng, Q, Qi, J.X.
登録日2023-10-20
公開日2024-02-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structures of RNA-dependent RNA polymerases from Jingmen tick virus and Alongshan virus
HLIFE, 2, 2024
8WU2
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BU of 8wu2 by Molmil
Crystal structure of RNA-dependent RNA polymerases from Jingmen tick virus
分子名称: RNA polymerase, SELENIUM ATOM
著者Liu, Z, Han, P, Peng, Q, Qi, J.
登録日2023-10-20
公開日2024-02-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of RNA-dependent RNA polymerases from Jingmen tick virus and Alongshan virus
HLIFE, 2, 2024
2HCS
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BU of 2hcs by Molmil
Crystal structure of RNA dependant RNA polymerase domain of West Nile virus
分子名称: RNA-directed RNA polymerase (NS5), ZINC ION
著者Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2006-06-18
公開日2007-02-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
2HFZ
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BU of 2hfz by Molmil
Crystal structure of RNA dependent RNA polymerase domain from West Nile virus
分子名称: MAGNESIUM ION, RNA-directed RNA polymerase(NS5), ZINC ION
著者Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
登録日2006-06-26
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
2J7W
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Dengue virus NS5 RNA dependent RNA polymerase domain complexed with 3' dGTP
分子名称: DI(HYDROXYETHYL)ETHER, GUANOSINE-5'-TRIPHOSPHATE, POLYPROTEIN, ...
著者Yap, T.L, Xu, T, Chen, Y.L, Malet, H, Egloff, M.P, Canard, B, Vasudevan, S.G, Lescar, J.
登録日2006-10-17
公開日2007-03-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the Dengue Virus RNA- Dependent RNA Polymerase Catalytic Domain at 1.85 Angstrom Resolution.
J.Virol., 81, 2007
2J7U
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Dengue virus NS5 RNA dependent RNA polymerase domain
分子名称: CHLORIDE ION, MAGNESIUM ION, RNA DEPENDENT RNA POLYMERASE, ...
著者Yap, T.L, Xu, T, Chen, Y.L, Malet, H, Egloff, M.P, Canard, B, Vasudevan, S.G, Lescar, J.
登録日2006-10-17
公開日2007-03-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of the Dengue Virus RNA- Dependent RNA Polymerase Catalytic Domain at 1.85 Angstrom Resolution.
J.Virol., 81, 2007
5TFR
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BU of 5tfr by Molmil
Crystal structure of Zika Virus NS5 protein
分子名称: Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Longenecker, K.L, Upadhyay, A.K.
登録日2016-09-26
公開日2016-10-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystal structure of full-length Zika virus NS5 protein reveals a conformation similar to Japanese encephalitis virus NS5.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5TMH
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Structure of Zika virus NS5
分子名称: GLYCEROL, Polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Wang, B, Tan, X, Song, J.
登録日2016-10-12
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.278 Å)
主引用文献The structure of Zika virus NS5 reveals a conserved domain conformation.
Nat Commun, 8, 2017
5U04
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BU of 5u04 by Molmil
Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase
分子名称: PHOSPHATE ION, ZINC ION, Zika Virus NS5 RdRp
著者Godoy, A.S, Lima, G.M.A, Oliveira, K.I.Z, Torres, N.U, Maluf, F.V, Guido, R.V.C, Oliva, G.
登録日2016-11-22
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase.
Nat Commun, 8, 2017
5U0C
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BU of 5u0c by Molmil
Structure of Zika virus NS5 RNA polymerase domain
分子名称: NS5 RNA polymerase domain, ZINC ION
著者Zhao, B, Du, F.
登録日2016-11-23
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and function of the Zika virus full-length NS5 protein.
Nat Commun, 8, 2017
5U0B
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BU of 5u0b by Molmil
Structure of full-length Zika virus NS5
分子名称: Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Zhao, B, Du, F.
登録日2016-11-23
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and function of the Zika virus full-length NS5 protein.
Nat Commun, 8, 2017
5IQ6
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Crystal structure of Dengue virus serotype 3 RNA dependent RNA polymerase bound to HeE1-2Tyr, a new pyridobenzothizole inhibitor
分子名称: N-[8-(cyclohexyloxy)-1-oxo-2-phenyl-1H-pyrido[2,1-b][1,3]benzothiazole-4-carbonyl]-L-tyrosine, RNA dependent RNA polymerase, ZINC ION
著者Tarantino, D, Mastrangelo, E, Milani, M.
登録日2016-03-10
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Targeting flavivirus RNA dependent RNA polymerase through a pyridobenzothiazole inhibitor.
Antiviral Res., 134, 2016
5JJR
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Dengue 3 NS5 protein with compound 29
分子名称: 1,2-ETHANEDIOL, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-4-methoxy-2-methyl-N-[(quinolin-8-yl)sulfonyl]benzamide, DI(HYDROXYETHYL)ETHER, ...
著者Lescar, J, El Sahili, A.
登録日2016-04-25
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling
Plos Pathog., 12, 2016
5JJS
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Dengue 3 NS5 protein with compound 27
分子名称: 1,2-ETHANEDIOL, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-{[(1R,3R)-3-methoxycyclohexyl]sulfonyl}benzamide, DI(HYDROXYETHYL)ETHER, ...
著者Lescar, J, El Sahili, A.
登録日2016-04-25
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling
Plos Pathog., 12, 2016
5K5M
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BU of 5k5m by Molmil
Co-Crystal Structure of Dengue Virus Serotype 2 RNA Dependent RNA Polymerase with Compound 27
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-2,4-dimethoxy-N-[(3-methoxyphenyl)sulfonyl]benzamide, RNA Dependent RNA Polymerase, ...
著者Arora, R, Benson, T.E.
登録日2016-05-23
公開日2016-08-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling.
Plos Pathog., 12, 2016
5M2X
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BU of 5m2x by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.991 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
5M2Z
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BU of 5m2z by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.8 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
6IZZ
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BU of 6izz by Molmil
The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678
分子名称: 2-oxo-2H-1,3-benzoxathiol-5-yl acetate, Genome polyprotein, ZINC ION
著者Shimizu, H, Sekine, S.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.
Plos Negl Trop Dis, 13, 2019
6J00
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BU of 6j00 by Molmil
The RNA-dependent RNA polymerase domain of dengue 3 NS5
分子名称: Genome polyprotein, ZINC ION
著者Shimizu, H, Sekine, S.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.
Plos Negl Trop Dis, 13, 2019
6IZY
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BU of 6izy by Molmil
The RNA-dependent RNA polymerase domain of dengue 2 NS5
分子名称: COBALT (II) ION, Genome polyprotein, ZINC ION
著者Shimizu, H, Sekine, S.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.
Plos Negl Trop Dis, 13, 2019
6IZX
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BU of 6izx by Molmil
The RNA-dependent RNA polymerase domain of dengue 2 NS5, bound with RK-0404678
分子名称: 2-oxo-2H-1,3-benzoxathiol-5-yl acetate, COBALT (II) ION, Genome polyprotein, ...
著者Shimizu, H, Sekine, S.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.
Plos Negl Trop Dis, 13, 2019
5DTO
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BU of 5dto by Molmil
Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, ACETATE ION, MAGNESIUM ION, ...
著者Zhao, Y, Soh, T.S, Lim, S.P, Chung, K.Y, Swaminathan, K, Vasudevan, S.G, Shi, P.-Y, Lescar, J, Luo, D.
登録日2015-09-18
公開日2015-11-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5)
Proc.Natl.Acad.Sci.USA, 112, 2015
5F3Z
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Dengue serotype 3 RNA-dependent RNA polymerase bound to PC-79-SH52
分子名称: 2-(4-methoxy-3-thiophen-2-yl-phenyl)ethanoic acid, Genome polyprotein, ZINC ION
著者Noble, C.G.
登録日2015-12-03
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Conserved Pocket in the Dengue Virus Polymerase Identified through Fragment-based Screening
J.Biol.Chem., 291, 2016
5F41
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DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO FD-83-KI26
分子名称: 2-(4-methoxy-3-thiophen-3-yl-phenyl)ethanoic acid, Genome polyprotein, ZINC ION
著者Noble, C.G.
登録日2015-12-03
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Conserved Pocket in the Dengue Virus Polymerase Identified through Fragment-based Screening
J.Biol.Chem., 291, 2016

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件を2024-05-29に公開中

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