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PDB: 249 件

4NRU
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BU of 4nru by Molmil
Murine Norovirus RNA-dependent-RNA-polymerase in complex with Compound 6, a suramin derivative
分子名称: 4-({4-methyl-3-[(3-nitrobenzoyl)amino]benzoyl}amino)naphthalene-1,5-disulfonic acid, MAGNESIUM ION, RNA dependent RNA polymerase
著者Milani, M, Croci, R, Pezzullo, M, Tarantino, D, Mastrangelo, E, Bolognesi, M.
登録日2013-11-27
公開日2014-10-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural bases of norovirus RNA dependent RNA polymerase inhibition by novel suramin-related compounds.
Plos One, 9, 2014
4NLO
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BU of 4nlo by Molmil
Poliovirus Polymerase - C290I Loop Mutant
分子名称: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ...
著者Sholders, A.J, Peersen, O.B.
登録日2013-11-14
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distinct conformations of a putative translocation element in poliovirus polymerase.
J.Mol.Biol., 426, 2014
9CPO
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BU of 9cpo by Molmil
Infectious bronchitis virus core polymerase complex
分子名称: Non-structural protein 7, Non-structural protein 8, RNA Primer, ...
著者Hoferle, P.J, Anderson, T.K, Kirchdoerfer, R.N.
登録日2024-07-18
公開日2024-07-31
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A genus-specific nsp12 region impacts polymerase assembly in Alpha- and Gammacoronaviruses.
Biorxiv, 2024
8URB
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BU of 8urb by Molmil
Porcine epidemic diarrhea virus complete core polymerase complex
分子名称: RNA (33-MER), RNA (55-MER), ZINC ION, ...
著者Anderson, T.K, Kirchdoerfer, R.N.
登録日2023-10-25
公開日2023-11-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献An alphacoronavirus polymerase structure reveals conserved co-factor functions.
Biorxiv, 2023
7THM
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BU of 7thm by Molmil
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
分子名称: MANGANESE (II) ION, Non-structural protein 7, Non-structural protein 8, ...
著者Osinski, A, Tagliabracci, V.S, Chen, Z, Li, Y.
登録日2022-01-11
公開日2022-03-16
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献The mechanism of RNA capping by SARS-CoV-2.
Nature, 609, 2022
7C2K
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BU of 7c2k by Molmil
COVID-19 RNA-dependent RNA polymerase pre-translocated catalytic complex
分子名称: Non-structural protein 7, Non-structural protein 8, RNA (29-MER), ...
著者Wang, Q, Gao, Y, Ji, W, Mu, A, Rao, Z.
登録日2020-05-07
公開日2020-06-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural Basis for RNA Replication by the SARS-CoV-2 Polymerase.
Cell, 182, 2020
7CTT
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BU of 7ctt by Molmil
Cryo-EM structure of Favipiravir bound to replicating polymerase complex of SARS-CoV-2 in the pre-catalytic state.
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Peng, Q, Peng, R, Shi, Y.
登録日2020-08-20
公開日2020-09-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Basis of SARS-CoV-2 Polymerase Inhibition by Favipiravir.
Innovation (N Y), 2, 2021
6XEZ
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BU of 6xez by Molmil
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CHAPSO, ...
著者Chen, J, Malone, B, Llewellyn, E.C, Campbell, E.A, Darst, S.A.
登録日2020-06-14
公開日2020-07-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural Basis for Helicase-Polymerase Coupling in the SARS-CoV-2 Replication-Transcription Complex.
Cell, 182, 2020
8GY6
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BU of 8gy6 by Molmil
Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
分子名称: Gossypol, Non-structural protein 7, Non-structural protein 8, ...
著者Wang, W, Ren, M, Li, F.
登録日2022-09-21
公開日2023-11-01
実験手法ELECTRON MICROSCOPY
主引用文献Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
To Be Published
8SQ9
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BU of 8sq9 by Molmil
SARS-CoV-2 replication-transcription complex bound to nsp9 and UMPCPP, as a pre-catalytic NMPylation intermediate
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine, MAGNESIUM ION, Non-structural protein 7, ...
著者Small, G.I, Darst, S.A, Campbell, E.A.
登録日2023-05-04
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain.
Mol.Cell, 83, 2023
8SQK
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BU of 8sqk by Molmil
SARS-CoV-2 replication-transcription complex bound to RNA-nsp9 and GDP-betaS, as a pre-catalytic deRNAylation/mRNA capping intermediate
分子名称: 5'-O-[(R)-hydroxy(thiophosphonooxy)phosphoryl]guanosine, MAGNESIUM ION, Non-structural protein 7, ...
著者Small, G.I, Darst, S.A, Campbell, E.A.
登録日2023-05-04
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain.
Mol.Cell, 83, 2023
8SQJ
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BU of 8sqj by Molmil
SARS-CoV-2 replication-transcription complex bound to RNA-nsp9, as a noncatalytic RNA-nsp9 binding mode
分子名称: 5'-O-[(R)-hydroxy(thiophosphonooxy)phosphoryl]guanosine, MAGNESIUM ION, Non-structural protein 7, ...
著者Small, G.I, Darst, S.A, Campbell, E.A.
登録日2023-05-04
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain.
Mol.Cell, 83, 2023
6XQB
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BU of 6xqb by Molmil
SARS-CoV-2 RdRp/RNA complex
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Liu, B, Shi, W, Yang, Y.
登録日2020-07-09
公開日2020-07-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of SARS-CoV-2 RdRp/RNA complex at 3.4 Angstroms resolution
To Be Published
6YYT
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BU of 6yyt by Molmil
Structure of replicating SARS-CoV-2 polymerase
分子名称: RNA product, ZINC ION, nsp12, ...
著者Hillen, H.S, Kokic, G, Farnung, L, Dienemann, C, Tegunov, D, Cramer, P.
登録日2020-05-06
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of replicating SARS-CoV-2 polymerase.
Nature, 584, 2020
7L1F
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BU of 7l1f by Molmil
SARS-CoV-2 RdRp in complex with 4 Remdesivir monophosphate
分子名称: Non-structural protein 7, Non-structural protein 8, RNA (5'-R(P*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*UP*CP*UP*UP*AP*G)-3'), ...
著者Bravo, J.P.K, Taylor, D.W.
登録日2020-12-14
公開日2021-02-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication.
Mol.Cell, 81, 2021
7KRN
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BU of 7krn by Molmil
Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CHAPSO, ...
著者Chen, J, Malone, B, Campbell, E.A, Darst, S.A.
登録日2020-11-20
公開日2021-04-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KRP
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BU of 7krp by Molmil
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - BTC (local refinement)
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHAPSO, MAGNESIUM ION, ...
著者Chen, J, Malone, B, Campbell, E.A, Darst, S.A.
登録日2020-11-20
公開日2021-04-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KRO
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BU of 7kro by Molmil
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CHAPSO, ...
著者Chen, J, Malone, B, Campbell, E.A, Darst, S.A.
登録日2020-11-20
公開日2021-04-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
7UO4
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BU of 7uo4 by Molmil
SARS-CoV-2 replication-transcription complex bound to Remdesivir triphosphate, in a pre-catalytic state
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
登録日2022-04-12
公開日2022-11-30
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7UOB
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BU of 7uob by Molmil
SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state
分子名称: 3'-DEOXYURIDINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
登録日2022-04-12
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7UO9
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BU of 7uo9 by Molmil
SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
登録日2022-04-12
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7UO7
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BU of 7uo7 by Molmil
SARS-CoV-2 replication-transcription complex bound to ATP, in a pre-catalytic state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-structural protein 7, ...
著者Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
登録日2022-04-12
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7UOE
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BU of 7uoe by Molmil
SARS-CoV-2 replication-transcription complex bound to CTP, in a pre-catalytic state
分子名称: 3'-DEOXYURIDINE-5'-MONOPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Malone, B.F, Perry, J.K, Appleby, T.C, Feng, J.Y, Campbell, E.A, Darst, S.A.
登録日2022-04-12
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Structural basis for substrate selection by the SARS-CoV-2 replicase.
Nature, 614, 2023
7OZV
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BU of 7ozv by Molmil
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
分子名称: Non-structural protein 7, Non-structural protein 8, Product RNA, ...
著者Kabinger, F, Stiller, C, Schmitzova, J, Dienemann, C, Kokic, G, Hillen, H.S, Hoebartner, C, Cramer, P.
登録日2021-06-28
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis.
Nat.Struct.Mol.Biol., 28, 2021
7OZU
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BU of 7ozu by Molmil
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
分子名称: Non-structural protein 7, Non-structural protein 8, Product RNA, ...
著者Kabinger, F, Stiller, C, Schmitzova, J, Dienemann, C, Kokic, G, Hillen, H.S, Hoebartner, C, Cramer, P.
登録日2021-06-28
公開日2021-08-18
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis.
Nat.Struct.Mol.Biol., 28, 2021

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件を2024-08-14に公開中

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