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PDB: 249 件

4B02
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The C-terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage phi6 RNA-Dependent RNA Polymerase
分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
著者Sarin, L.P, Wright, S, Chen, Q, Degerth, L.H, Stuart, D.I, Grimes, J.M, Bamford, D.H, Poranen, M.M.
登録日2012-06-27
公開日2012-08-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The C-Terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage Phi6 RNA-Dependent RNA Polymerase.
Virology, 432, 2012
2B43
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Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE
分子名称: non-structural polyprotein
著者Hogbom, M, Rohayem, J, Unge, T, Jones, T.A.
登録日2005-09-22
公開日2005-10-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE
To be Published
5TSN
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BU of 5tsn by Molmil
Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex
分子名称: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3')
著者Shaik, M.M, Ng, K.K.
登録日2016-10-30
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences.
Proteins, 85, 2017
6GVY
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BU of 6gvy by Molmil
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA
分子名称: GLYCEROL, Genome polyprotein, RNA (5'-R(P*CP*CP*GP*GP*G)-3'), ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2018-06-21
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis.
J. Virol., 92, 2018
6GVV
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BU of 6gvv by Molmil
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus
分子名称: GLYCEROL, RNA polymerase 3D
著者Verdaguer, N, Ferrer Orta, C.
登録日2018-06-21
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis.
J.Virol., 92, 2018
1RA7
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BU of 1ra7 by Molmil
Poliovirus Polymerase with GTP
分子名称: ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, Genome polyprotein
著者Thompson, A.A, Peersen, O.B.
登録日2003-10-31
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase.
Embo J., 23, 2004
1RAJ
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BU of 1raj by Molmil
Poliovirus Polymerase with a 68 residue N-terminal truncation
分子名称: Genome polyprotein
著者Thompson, A.A, Peersen, O.B.
登録日2003-10-31
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase.
Embo J., 23, 2004
8C2P
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BU of 8c2p by Molmil
FMDV 3D polymerase in complex with 3B3
分子名称: Protein 3B-3, RNA-directed RNA polymerase 3D-POL
著者Ferrer-Orta, C, Veraguer, N.
登録日2022-12-22
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes.
Plos Pathog., 19, 2023
8C1N
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BU of 8c1n by Molmil
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group
分子名称: ACETATE ION, GLYCEROL, Protein 3B-1, ...
著者Ferrer-Orta, C, Veraguer, N.
登録日2022-12-20
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes.
Plos Pathog., 19, 2023
4WFZ
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BU of 4wfz by Molmil
Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase - NaCl Crystal Form
分子名称: RNA-directed RNA polymerase, SODIUM ION
著者Peersen, O.B, McDonald, S.M.
登録日2014-09-17
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
4WFY
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Coxsackievirus B3 Polymerase - F232L Mutant - AmSO4 Crystal Form
分子名称: GLYCEROL, RNA-directed RNA polymerase, SULFATE ION
著者Peersen, O.B, McDonald, S.M.
登録日2014-09-17
公開日2014-10-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
4R0E
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BU of 4r0e by Molmil
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Low-Fidelity Mutant 3Dpol H273R
分子名称: RNA-directed RNA polymerase
著者Marcotte, L.L, Gohara, D.W, Filman, D.J, Hogle, J.M.
登録日2014-07-30
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Dynamics as a Contributor to Error-prone Replication by an RNA-dependent RNA Polymerase.
J.Biol.Chem., 289, 2014
4QPX
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BU of 4qpx by Molmil
NV polymerase post-incorporation-like complex
分子名称: GLYCEROL, MANGANESE (II) ION, Polyprotein, ...
著者Zamyatkin, D.F, Parra, F, Grochulski, P, Ng, K.K.S.
登録日2014-06-25
公開日2015-04-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of a backtracked state reveals conformational changes similar to the state following nucleotide incorporation in human norovirus polymerase.
Acta Crystallogr.,Sect.D, 70, 2014
5N8X
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BU of 5n8x by Molmil
Trigonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus
分子名称: 3D polymerase, GLYCEROL, MANGANESE (II) ION
著者Ferrer-Orta, C, Verdaguer, N.
登録日2017-02-24
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus.
Genome Biol Evol, 9, 2017
5N95
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Tetragonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus
分子名称: 3D polymerase, TRIPHOSPHATE
著者Ferrer-Orta, C, Verdaguer, N.
登録日2017-02-24
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus.
Genome Biol Evol, 9, 2017
3QID
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BU of 3qid by Molmil
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
分子名称: GLYCEROL, MANGANESE (III) ION, RNA dependent RNA polymerase, ...
著者Kim, K.H, Intekhab, A, Lee, J.H.
登録日2011-01-27
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of murine norovirus-1 RNA-dependent RNA polymerase.
J.Gen.Virol., 92, 2011
6QWT
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BU of 6qwt by Molmil
Sicinivirus 3Dpol RNA dependent RNA polymerase
分子名称: Genome polyprotein
著者Dubankova, A, Boura, E.
登録日2019-03-06
公開日2019-10-09
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of kobuviral and siciniviral polymerases reveal conserved mechanism of picornaviral polymerase activation.
J.Struct.Biol., 208, 2019
6R1I
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BU of 6r1i by Molmil
Structure of porcine Aichi virus polymerase
分子名称: Genome polyprotein
著者Dubankova, A, Boura, E.
登録日2019-03-14
公開日2019-10-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.634 Å)
主引用文献Structures of kobuviral and siciniviral polymerases reveal conserved mechanism of picornaviral polymerase activation.
J.Struct.Biol., 208, 2019
5I62
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BU of 5i62 by Molmil
Crystal structure of the insertion loop deletion mutant of the RNA-dependent RNA polymerase of a human picorbirnavirus
分子名称: Potential RNA-dependent RNA polymerase
著者Collier, A.M, Guo, Y.R, Tao, Y.J.
登録日2016-02-15
公開日2016-03-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA Virus.
Plos Pathog., 12, 2016
6S2L
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BU of 6s2l by Molmil
FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide
分子名称: GLYCEROL, Genome polyprotein
著者Verdaguer, N, Ferrer-Orta, C.
登録日2019-06-21
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献(F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase.
Molecules, 24, 2019
3SFU
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BU of 3sfu by Molmil
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin
分子名称: 1-(beta-D-ribofuranosyl)-1H-1,2,4-triazole-3-carboxamide, GLYCEROL, MAGNESIUM ION, ...
著者Kim, K.H, Alam, I.
登録日2011-06-14
公開日2012-05-09
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structures of murine norovirus-1 RNA-dependent RNA polymerase in complex with 2-thiouridine or ribavirin.
Virology, 426, 2012
1KHV
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BU of 1khv by Molmil
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+
分子名称: LUTETIUM (III) ION, RNA-DIRECTED RNA POLYMERASE
著者Ng, K.K, Cherney, M.M, Vazquez, A.L, Machin, A, Alonso, J.M, Parra, F, James, M.N.
登録日2001-12-01
公開日2002-01-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of active and inactive conformations of a caliciviral RNA-dependent RNA polymerase.
J.Biol.Chem., 277, 2002
3DDK
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Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase
分子名称: RNA polymerase B3 3Dpol, SODIUM ION, SULFATE ION
著者Campagnola, G, Weygandt, M.H, Scoggin, K.E, Peersen, O.B.
登録日2008-06-05
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Coxsackievirus B3 3Dpol Highlights Functional Importance of Residue 5 in Picornaviral Polymerases
J.Virol., 82, 2008
2UUT
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The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase
分子名称: RNA-DIRECTED RNA POLYMERASE
著者Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P, Rohayem, J.
登録日2007-03-07
公開日2007-05-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The 2.4 Angstrom Resolution Structure of the D346G Mutant of the Sapporo Virus Rdrp Polymerase
To be Published
8IIC
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Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta40 mutant (residues 41-546)
分子名称: Polymerase polyprotein
著者Fang, X, Lu, G, Hou, C, Gong, P.
登録日2023-02-24
公開日2023-06-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Unusual substructure conformations observed in crystal structures of a dicistrovirus RNA-dependent RNA polymerase suggest contribution of the N-terminal extension in proper folding.
Virol Sin, 38, 2023

223790

件を2024-08-14に公開中

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