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7LNL
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Crystal structure of KPC-2 S70G/T215P mutant with hydrolyzed imipenem
Descriptor: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Furey, I, Palzkill, T, Sankaran, B, Hu, L, Prasad, B.V.V.
Deposit date:2021-02-07
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase.
J.Biol.Chem., 296, 2021
7LLH
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BU of 7llh by Molmil
KPC-2 F72Y mutant with acylated imipenem
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Furey, I, Palzkill, T, Sankaran, B, Hu, L, Prasad, B.V.V.
Deposit date:2021-02-03
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase.
J.Biol.Chem., 296, 2021
7LLB
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BU of 7llb by Molmil
Crystal structure of KPC-2 S70G/T215P mutant with hydrolyzed meropenem
Descriptor: (2S,3R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfan yl-3-methyl-2,3-dihydro-1H-pyrrole-5-carboxylic acid, Carbapenem-hydrolyzing beta-lactamase KPC
Authors:Furey, I, Palzkill, T, Sankaran, B, Hu, L, Prasad, B.V.V.
Deposit date:2021-02-03
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase.
J.Biol.Chem., 296, 2021
7LK8
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BU of 7lk8 by Molmil
Crystal structure of KPC-2 T215P mutant
Descriptor: Beta-lactamase, SODIUM ION
Authors:Furey, I, Palzkill, T, Sankaran, B, Hu, L, Prasad, B.V.V.
Deposit date:2021-02-01
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase.
J.Biol.Chem., 296, 2021
7LJK
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BU of 7ljk by Molmil
Crystal structure of the deacylation deficient KPC-2 F72Y mutant
Descriptor: Beta-lactamase
Authors:Furey, I, Palzkill, T, Sankaran, B, Hu, L, Prasad, B.V.V.
Deposit date:2021-01-29
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase.
J.Biol.Chem., 296, 2021
7KCY
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BU of 7kcy by Molmil
Crystal structure of S. aureus penicillin-binding protein 4 (PBP4) with cefoxitin
Descriptor: (2R)-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4, ...
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2020-10-07
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:PBP4-mediated beta-lactam resistance among clinical strains of Staphylococcus aureus.
J.Antimicrob.Chemother., 76, 2021
7KCX
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Crystal structure of S. aureus penicillin-binding protein 4 (PBP4) mutant (R200L) in complex with cefoxitin
Descriptor: (2R)-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4, ...
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2020-10-07
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:PBP4-mediated beta-lactam resistance among clinical strains of Staphylococcus aureus.
J.Antimicrob.Chemother., 76, 2021
7KCW
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BU of 7kcw by Molmil
Crystal structure of S. aureus penicillin-binding protein 4 (PBP4) mutant (R200L) in complex with nafcillin
Descriptor: (2R,4S)-2-[(1R)-1-{[(2-ethoxynaphthalen-1-yl)carbonyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4, ...
Authors:Alexander, J.A, Strynadka, N.C.
Deposit date:2020-10-07
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:PBP4-mediated beta-lactam resistance among clinical strains of Staphylococcus aureus.
J.Antimicrob.Chemother., 76, 2021
7KCV
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BU of 7kcv by Molmil
Crystal structure of S. aureus penicillin-binding protein 4 (PBP4) mutant (R200L)
Descriptor: Penicillin-binding protein 4, ZINC ION
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2020-10-07
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:PBP4-mediated beta-lactam resistance among clinical strains of Staphylococcus aureus.
J.Antimicrob.Chemother., 76, 2021
7K8L
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BU of 7k8l by Molmil
Beta-lactamase, Unmixed
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Pandey, S, Schmidt, M.
Deposit date:2020-09-27
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8000102 Å)
Cite:Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography
Iucrj, 8, 2021
7K8K
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BU of 7k8k by Molmil
Beta-lactamase mixed with Sulbactam, 60ms
Descriptor: Beta-lactamase, PHOSPHATE ION, SULBACTAM, ...
Authors:Pandey, S, Schmidt, M.
Deposit date:2020-09-27
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography
Iucrj, 8, 2021
7K8H
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BU of 7k8h by Molmil
Beta-lactamase mixed with Ceftriaxone, 50ms
Descriptor: Beta-lactamase, Ceftriaxone, PHOSPHATE ION
Authors:Pandey, S, Schmidt, M.
Deposit date:2020-09-27
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.60006261 Å)
Cite:Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography
Iucrj, 8, 2021
7K8F
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BU of 7k8f by Molmil
Beta-lactamase mixed with Ceftriaxone, 10ms
Descriptor: Beta-lactamase, Ceftriaxone, PHOSPHATE ION
Authors:Pandey, S, Schmidt, M.
Deposit date:2020-09-26
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.60003138 Å)
Cite:Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography
Iucrj, 8, 2021
7K8E
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BU of 7k8e by Molmil
Beta-lactamase mixed with Ceftriaxone, 5ms
Descriptor: Beta-lactamase, Ceftriaxone, PHOSPHATE ION
Authors:Pandey, S, Schmidt, M.
Deposit date:2020-09-26
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.40005636 Å)
Cite:Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography
Iucrj, 8, 2021
7K2Y
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BU of 7k2y by Molmil
Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed ampicillin
Descriptor: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase
Authors:Lu, S, Palzkill, T, Sankaran, B, Hu, L, Soeung, V, Prasad, B.V.V.
Deposit date:2020-09-09
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency.
J.Biol.Chem., 295, 2020
7K2X
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BU of 7k2x by Molmil
Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase
Descriptor: Beta-lactamase, GLYCEROL
Authors:Lu, S, Palzkill, T, Sankaran, B, Hu, L, Soeung, V, Prasad, B.V.V.
Deposit date:2020-09-09
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency.
J.Biol.Chem., 295, 2020
7K2W
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BU of 7k2w by Molmil
Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed cefotaxime
Descriptor: Beta-lactamase, CEFOTAXIME, C3' cleaved, ...
Authors:Lu, S, Palzkill, T, Sankaran, B, Hu, L, Soeung, V, Prasad, B.V.V.
Deposit date:2020-09-09
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency.
J.Biol.Chem., 295, 2020
7E9A
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BU of 7e9a by Molmil
Crystal structure of KPC-2 in complex with (S)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acrylic acid (4a-(S))
Descriptor: 2-[(3S)-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]prop-2-enoic acid, ACETIC ACID, Beta-lactamase, ...
Authors:Li, G.-B, Yan, Y.-H.
Deposit date:2021-03-03
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Design and enantioselective synthesis of 3-( alpha-acrylic acid) benzoxaboroles to combat carbapenemase resistance.
Chem.Commun.(Camb.), 57, 2021
7DOO
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BU of 7doo by Molmil
Crystal Structure of PenA beta-Lactamase-Avibactam Complex
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase
Authors:Nukaga, M, Papp-Wallace, K.M, Bonomo, R.A.
Deposit date:2020-12-15
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Overcoming an Extremely Drug Resistant (XDR) Pathogen: Avibactam Restores Susceptibility to Ceftazidime for Burkholderia cepacia Complex Isolates from Cystic Fibrosis Patients.
Acs Infect Dis., 3, 2017
7DDM
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BU of 7ddm by Molmil
Crystal Structure of PenA39 beta-Lactamase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ALA-ALA-ARG-ASP-ALA-ALA-VAL-SER-ASP-ALA-ALA-ALA, ...
Authors:Nukaga, M, Hoshino, T, Papp-Wallace, K.M.
Deposit date:2020-10-29
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Frameshift mutations in genes encoding PBP3 and PBP4 trigger an unusual, extreme beta-lactam resistance phenotype in Burkholderia multivorans
To Be Published
7D5J
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BU of 7d5j by Molmil
CRYSTAL STRUCTURE OF R220A VARIANT PENA BETA-LACTAMASE FROM BURKHOLDERIA MULTIVORANS
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PenA Beta-lactamase
Authors:Nukaga, M, Hoshino, T, Papp-Wallace, K.M.
Deposit date:2020-09-26
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Assessing the Potency of beta-Lactamase Inhibitors with Diverse Inactivation Mechanisms against the PenA1 Carbapenemase from Burkholderia multivorans .
Acs Infect Dis., 7, 2021
7CIN
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BU of 7cin by Molmil
Crystal structure of the extended-spectrum class C beta-lactamase AmpC BER with the ordered R2 loop
Descriptor: Beta-lactamase, SULFATE ION
Authors:Jeong, B.G, Cha, S.S.
Deposit date:2020-07-07
Release date:2021-05-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79006362 Å)
Cite:Crystal structure of AmpC BER and molecular docking lead to the discovery of broad inhibition activities of halisulfates against beta-lactamases.
Comput Struct Biotechnol J, 19, 2021
7BH7
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BU of 7bh7 by Molmil
Room temperature, serial X-ray structure of the ertapenem-derived acylenzyme of CTX-M-15 (10 min soak) collected on fixed target chips at Diamond Light Source I24
Descriptor: (2~{S},3~{R},4~{R})-3-[5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-4-methyl-5-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-3,4-dihydro-2~{H}-pyrrole-2-carboxylic acid, Beta-lactamase, CHLORIDE ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BH6
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BU of 7bh6 by Molmil
Room temperature, serial X-ray structure of CTX-M-15 collected on fixed target chips at Diamond Light Source I24
Descriptor: Beta-lactamase, CHLORIDE ION, SODIUM ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021
7BH5
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BU of 7bh5 by Molmil
XFEL structure of the ertapenem-derived CTX-M-15 acylenzyme after mixing for 2 sec using a piezoelectric injector (PolyPico)
Descriptor: (2~{S},3~{R},4~{R})-3-[5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-4-methyl-5-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-3,4-dihydro-2~{H}-pyrrole-2-carboxylic acid, Beta-lactamase, CHLORIDE ION, ...
Authors:Hinchliffe, P, Tooke, C.L, Butryn, A, Spencer, J.
Deposit date:2021-01-10
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography.
Nat Commun, 12, 2021

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PDB entries from 2024-08-07

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