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6Q3F
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BU of 6q3f by Molmil
CDK2 in complex with FragLite2
Descriptor: 4-bromanylpyridin-2-amine, Cyclin-dependent kinase 2
Authors:Wood, D.J, Martin, M.P, Noble, M.E.M.
Deposit date:2018-12-04
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
6NTC
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BU of 6ntc by Molmil
Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 1 of CRAF Kinase protein
Descriptor: GLYCEROL, GTPase HRas, MAGNESIUM ION, ...
Authors:Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
Deposit date:2019-01-28
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
8G6U
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BU of 8g6u by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with 8ANC195 and 10-1074
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CRF-1_AE T/F100 HIV-1 gp41, ...
Authors:Chen, Y, Zhou, F, Huang, R, Tolbert, W, Pazgier, M.
Deposit date:2023-02-16
Release date:2023-11-08
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
7QHV
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BU of 7qhv by Molmil
Crystal structure of the sulfoquinovosyl binding protein SmoF complexed with sulfoquinovosyl diacylglycerol
Descriptor: GLYCINE, Sulfoquinovosyl binding protein, [(2~{S},3~{S},4~{S},5~{R},6~{S})-6-[(2~{S})-3-butanoyloxy-2-heptanoyloxy-propoxy]-3,4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid
Authors:Snow, A, Davies, G.J.
Deposit date:2021-12-14
Release date:2022-04-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The sulfoquinovosyl glycerol binding protein SmoF binds and accommodates plant sulfolipids.
Curr Res Struct Biol, 4, 2022
6QJ0
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BU of 6qj0 by Molmil
Crystal structure of the C. thermophilum condensin Smc2 ATPase head (crystal form II)
Descriptor: Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
Authors:Hassler, M, Haering, C.H.
Deposit date:2019-01-22
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of an Asymmetric Condensin ATPase Cycle.
Mol.Cell, 74, 2019
7BAV
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BU of 7bav by Molmil
A de novo pentameric coiled-coil assembly: CC-Type2-(TgLaId)4-W19BrPhe.
Descriptor: CC-Type2-(TgLaId)4-W19BrPhe
Authors:Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N.
Deposit date:2020-12-16
Release date:2021-04-28
Last modified:2021-11-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states.
Chem Sci, 12, 2021
6QK2
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BU of 6qk2 by Molmil
R2-like ligand-binding oxidase Y715F mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2019-01-28
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.596 Å)
Cite:Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020
6Q4D
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BU of 6q4d by Molmil
CDK2 in complex with FragLite31
Descriptor: 2-(4-bromanyl-2-methoxy-phenyl)ethanoic acid, Cyclin-dependent kinase 2
Authors:Wood, D.J, Martin, M.P, Noble, M.E.M.
Deposit date:2018-12-05
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
6LOJ
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BU of 6loj by Molmil
The complex structure of IpaH9.8-LRR and hGBP1
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanylate-binding protein 1, Invasion plasmid antigen
Authors:Ye, Y, Huang, H.
Deposit date:2020-01-06
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:Substrate-binding destabilizes the hydrophobic cluster to relieve the autoinhibition of bacterial ubiquitin ligase IpaH9.8.
Commun Biol, 3, 2020
6M8P
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BU of 6m8p by Molmil
Human ERAP1 bound to phosphinic pseudotripeptide inhibitor DG013
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 1, Nalpha-[(2S)-2-{[[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]methyl}-4-methylpentanoyl]-L-tryptophanamide, ...
Authors:Maben, Z, Stern, L.J.
Deposit date:2018-08-22
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Conformational dynamics linked to domain closure and substrate binding explain the ERAP1 allosteric regulation mechanism.
Nat Commun, 12, 2021
6Q6E
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BU of 6q6e by Molmil
Structural and functional insights into the condensin ATPase cycle
Descriptor: Condensin complex subunit 2,Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
Authors:Simon, B, Hassler, M, Haering, C.H, Hennig, J.
Deposit date:2018-12-10
Release date:2019-07-03
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural Basis of an Asymmetric Condensin ATPase Cycle.
Mol.Cell, 74, 2019
8ROM
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BU of 8rom by Molmil
Crystal structure of human FAD synthase PAPS domain in complex with FAD
Descriptor: FAD synthase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
Authors:Leo, G, Capaldi, S.
Deposit date:2024-01-11
Release date:2024-04-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural insights into the bifunctional enzyme human FAD synthase.
Structure, 32, 2024
6QD9
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BU of 6qd9 by Molmil
Leishmania major N-myristoyltransferase in complex with thienopyrimidine inhibitor IMP-0000065
Descriptor: 3-[[2-[3-(dimethylamino)propyl-methyl-amino]thieno[3,2-d]pyrimidin-4-yl]-methyl-amino]propanenitrile, Glycylpeptide N-tetradecanoyltransferase, MAGNESIUM ION, ...
Authors:Brannigan, J.A.
Deposit date:2019-01-01
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Novel Thienopyrimidine Inhibitors of Leishmania N -Myristoyltransferase with On-Target Activity in Intracellular Amastigotes.
J.Med.Chem., 63, 2020
6QDH
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BU of 6qdh by Molmil
Leishmania major N-myristoyltransferase in complex with quinazoline inhibitor IMP-0000906
Descriptor: 4-[ethyl(methyl)amino]-2-[methyl-(1-methylpiperidin-4-yl)amino]-~{N}-(1,3,5-trimethylpyrazol-4-yl)quinazoline-6-sulfonamide, Glycylpeptide N-tetradecanoyltransferase, MAGNESIUM ION, ...
Authors:Brannigan, J.A.
Deposit date:2019-01-01
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Thienopyrimidine Inhibitors of Leishmania N -Myristoyltransferase with On-Target Activity in Intracellular Amastigotes.
J.Med.Chem., 63, 2020
6XZE
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BU of 6xze by Molmil
crystal structure of human carbonic anhydrase I in complex with 4-(3-(2-((2-fluorobenzyl)amino)ethyl)ureido) benzenesulfonamide
Descriptor: 1-[2-[(2-fluorophenyl)methylamino]ethyl]-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, ZINC ION
Authors:Zanotti, G, Majid, A, Bozdag, M, Angeli, A, Carta, F, Berto, P, Supuran, C.
Deposit date:2020-02-04
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Benzylaminoethyureido-Tailed Benzenesulfonamides: Design, Synthesis, Kinetic and X-ray Investigations on Human Carbonic Anhydrases.
Int J Mol Sci, 21, 2020
6XIG
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BU of 6xig by Molmil
X-ray crystal structure of MqnE from Pedobacter heparinus
Descriptor: Aminodeoxyfutalosine synthase, D(-)-TARTARIC ACID, IRON/SULFUR CLUSTER
Authors:Grove, T.L, Bonanno, J.B, Almo, S.C.
Deposit date:2020-06-19
Release date:2020-07-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Narrow-Spectrum Antibiotic Targeting of the Radical SAM Enzyme MqnE in Menaquinone Biosynthesis.
Biochemistry, 59, 2020
7SC2
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BU of 7sc2 by Molmil
CRYSTAL STRUCTURE OF THE N-DOMAIN OF CARDIAC MUSCLE TROPONIN C TETHERED TO THE SWITCH REGION OF CARDIAC MUSCLE TROPONIN I (TETRAGONAL FORM)
Descriptor: CALCIUM ION, Troponin C, slow skeletal and cardiac muscles,Troponin I, ...
Authors:Sack, J.S.
Deposit date:2021-09-27
Release date:2021-12-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.814 Å)
Cite:X-ray structure of a human cardiac muscle troponin C/troponin I chimera in two crystal forms.
Acta Crystallogr.,Sect.F, 78, 2022
6QK0
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BU of 6qk0 by Molmil
R2-like ligand-binding oxidase E69D mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2019-01-28
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020
6QHM
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BU of 6qhm by Molmil
14-3-3 sigma with RelA/p65 binding site pS281
Descriptor: 14-3-3 protein sigma, LEU-SEP-GLU
Authors:Wolter, M, Ottmann, C.
Deposit date:2019-01-16
Release date:2020-05-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Selectivity via Cooperativity: Preferential Stabilization of the p65/14-3-3 Interaction with Semisynthetic Natural Products.
J.Am.Chem.Soc., 142, 2020
8RRQ
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BU of 8rrq by Molmil
Crystal structure of human SYK in complex with compound 24
Descriptor: GLYCEROL, N-[(1S,2R)-2-azanylcyclohexyl]-5-[2-[(3,5-dimethylphenyl)amino]pyrimidin-4-yl]-2-methyl-pyrazole-3-carboxamide, Tyrosine-protein kinase SYK
Authors:Canevari, G.
Deposit date:2024-01-23
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and optimization of 4-pyrazolyl-2-aminopyrimidine derivatives as potent spleen tyrosine kinase (SYK) inhibitors.
Eur.J.Med.Chem., 270, 2024
7S0I
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BU of 7s0i by Molmil
CRYSTAL STRUCTURE OF N1 NEURAMINIDASE FROM A/Michigan/45/2015(H1N1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2021-08-30
Release date:2021-12-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.892 Å)
Cite:A Novel Recombinant Influenza Virus Neuraminidase Vaccine Candidate Stabilized by a Measles Virus Phosphoprotein Tetramerization Domain Provides Robust Protection from Virus Challenge in the Mouse Model.
Mbio, 12, 2021
6QGI
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BU of 6qgi by Molmil
Crystal structure of VP5 from Haloarchaeal pleomorphic virus 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, VP5
Authors:El Omari, K, Walter, T.S, Harlos, K, Grimes, J.M, Stuart, D.I, Roine, E.
Deposit date:2019-01-11
Release date:2019-02-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.
Nat Commun, 10, 2019
7SC3
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BU of 7sc3 by Molmil
CRYSTAL STRUCTURE OF THE N-DOMAIN OF CARDIAC MUSCLE TROPONIN C TETHERED TO THE SWITCH REGION OF CARDIAC MUSCLE TROPONIN I (ORTHORHOMBIC FORM)
Descriptor: CALCIUM ION, Troponin C, slow skeletal and cardiac muscles,Troponin I, ...
Authors:Sack, J.S.
Deposit date:2021-09-27
Release date:2021-12-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.229 Å)
Cite:X-ray structure of a human cardiac muscle troponin C/troponin I chimera in two crystal forms.
Acta Crystallogr.,Sect.F, 78, 2022
6QLG
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BU of 6qlg by Molmil
Crystal structure of AnUbiX (PadA1) in complex with FMN and dimethylallyl pyrophosphate
Descriptor: DI(HYDROXYETHYL)ETHER, DIMETHYLALLYL DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, ...
Authors:Marshall, S.A, Payne, K.A.P, Leys, D.
Deposit date:2019-02-01
Release date:2019-06-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The UbiX flavin prenyltransferase reaction mechanism resembles class I terpene cyclase chemistry.
Nat Commun, 10, 2019
8RKF
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BU of 8rkf by Molmil
Crystal structure of the ZP-N1 and ZP-N2 domains of human ZP2 (hZP2-N1N2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Zona pellucida sperm-binding protein 2
Authors:Dioguardi, E, Stsiapanava, A, de Sanctis, D, Jovine, L.
Deposit date:2023-12-25
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat.
Cell, 187, 2024

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PDB entries from 2024-11-06

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