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PDB: 884 results

2AWZ
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Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5h)
Descriptor: 5R-(4-BROMOPHENYLMETHYL)-3-(BENZENESULFONYLAMINO)-4-OXO-2-THIONOTHIAZOLIDINE, Genome polyprotein, SULFATE ION
Authors:Powers, J.P, Piper, D.E, Li, Y, Mayorga, V, Anzola, J, Chen, J.M, Jaen, J.C, Lee, G, Liu, J, Peterson, M.G, Tonn, G.R, Ye, Q, Walker, N.P, Wang, Z.
Deposit date:2005-09-02
Release date:2006-01-24
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:SAR and Mode of Action of Novel Non-Nucleoside Inhibitors of Hepatitis C NS5b RNA Polymerase.
J.Med.Chem., 49, 2006
2QGV
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Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri. Northeast Structural Genomics Consortium Target SfR170
Descriptor: Hydrogenase-1 operon protein hyaE
Authors:Forouhar, F, Su, M, Seetharaman, J, Benach, J, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-29
Release date:2007-07-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri.
To be Published
1IMX
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1.8 Angstrom crystal structure of IGF-1
Descriptor: BROMIDE ION, Insulin-like Growth Factor 1A, N,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE
Authors:Vajdos, F.F, Ultsch, M, Schaffer, M.L, Deshayes, K.D, Liu, J, Skelton, N.J, de Vos, A.M.
Deposit date:2001-05-11
Release date:2001-09-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of human insulin-like growth factor-1: detergent binding inhibits binding protein interactions.
Biochemistry, 40, 2001
3CLH
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BU of 3clh by Molmil
Crystal structure of 3-dehydroquinate synthase (DHQS)from Helicobacter pylori
Descriptor: 3-dehydroquinate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Wang, W.C, Liu, J.S, Cheng, W.C, Wang, H.J, Chen, Y.C.
Deposit date:2008-03-19
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitor discovery of Helicobacter pylori dehydroquinate synthase.
Biochem.Biophys.Res.Commun., 373, 2008
2BGN
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HIV-1 Tat protein derived N-terminal nonapeptide Trp2-Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Weihofen, W.A, Liu, J, Reutter, W, Saenger, W, Fan, H.
Deposit date:2005-01-03
Release date:2005-01-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal Structures of HIV-1 Tat-Derived Nonapeptides Tat-(1-9) and Trp2-Tat-(1-9) Bound to the Active Site of Dipeptidyl-Peptidase Iv (Cd26)
J.Biol.Chem., 280, 2005
1HUO
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CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCP
Descriptor: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*C)-3', CHROMIUM ION, ...
Authors:Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
Deposit date:2001-01-04
Release date:2001-04-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
8IFO
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Crystal structure of estrogen related receptor-gamma DNA binding domain complexed with Pla2g12b promoter
Descriptor: DNA (5'-D(*GP*AP*GP*GP*AP*CP*AP*AP*AP*GP*GP*TP*GP*AP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*TP*CP*AP*CP*CP*TP*TP*TP*GP*TP*CP*CP*TP*C)-3'), Estrogen-related receptor gamma, ...
Authors:Xu, T, Zhen, X, Liu, J.
Deposit date:2023-02-19
Release date:2023-03-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:ERR gamma-DBD undergoes dimerization and conformational rearrangement upon binding to the downstream site of the DR1 element.
Biochem.Biophys.Res.Commun., 656, 2023
3UUF
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Crystal structure of mono- and diacylglycerol lipase from Malassezia globosa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIP1, secretory lipase (Family 3), ...
Authors:Xu, T, Xu, J, Hou, S, Liu, J.
Deposit date:2011-11-28
Release date:2012-04-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a mono- and diacylglycerol lipase from Malassezia globosa reveals a novel lid conformation and insights into the substrate specificity.
J.Struct.Biol., 178, 2012
3UUE
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Crystal structure of mono- and diacylglycerol lipase from Malassezia globosa
Descriptor: CHLORIDE ION, GLYCEROL, LIP1, ...
Authors:Xu, T, Xu, J, Hou, S, Liu, J.
Deposit date:2011-11-28
Release date:2012-04-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a mono- and diacylglycerol lipase from Malassezia globosa reveals a novel lid conformation and insights into the substrate specificity.
J.Struct.Biol., 178, 2012
1HUZ
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BU of 1huz by Molmil
CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP
Descriptor: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3', CHROMIUM ION, ...
Authors:Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
Deposit date:2001-01-04
Release date:2001-04-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
1LB2
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Structure of the E. coli alpha C-terminal domain of RNA polymerase in complex with CAP and DNA
Descriptor: 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*AP*GP*GP*AP*AP*AP*AP*AP*AP*G)-3', 5'-D(*CP*TP*TP*TP*TP*TP*TP*CP*CP*TP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Benoff, B, Yang, H, Lawson, C.L, Parkinson, G, Liu, J, Blatter, E, Ebright, Y.W, Berman, H.M, Ebright, R.H.
Deposit date:2002-04-01
Release date:2002-09-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of transcription activation: the CAP-alpha CTD-DNA complex.
Science, 297, 2002
4HSV
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BU of 4hsv by Molmil
Crystal Structure of CXCL4L1
Descriptor: Platelet factor 4 variant
Authors:Kuo, J.H, Liu, J.S, Wu, W.G, Sue, S.C.
Deposit date:2012-10-30
Release date:2013-04-10
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.083 Å)
Cite:Alternative C-terminal helix orientation alters chemokine function: structure of the anti-angiogenic chemokine, CXCL4L1
J.Biol.Chem., 288, 2013
2BGR
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BU of 2bgr by Molmil
Crystal structure of HIV-1 Tat derived nonapeptides Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Weihofen, W.A, Liu, J, Reutter, W, Saenger, W, Fan, H.
Deposit date:2005-01-04
Release date:2005-01-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of HIV-1 Tat-Derived Nonapeptides Tat-(1-9) and Trp2-Tat-(1-9) Bound to the Active Site of Dipeptidyl-Peptidase Iv (Cd26)
J.Biol.Chem., 280, 2005
2RAD
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BU of 2rad by Molmil
Crystal structure of the succinoglycan biosynthesis protein. Northeast structural Genomics Consortium target BcR135
Descriptor: Succinoglycan biosynthesis protein
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Mao, L, Cunningham, K, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-14
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of the succinoglycan biosynthesis protein.
To be Published
2RA2
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BU of 2ra2 by Molmil
X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A. Northeast Structural Genomics Consortium target StR88A
Descriptor: Putative lipoprotein
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Vorobiev, S.M, Wang, H, Mao, L, Cunningham, K, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-14
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-Ray structure of the Q7CPV8 protein from Salmonella typhimurium at the resolution 1.9 A.
To be Published
8VH8
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BU of 8vh8 by Molmil
Crystal structure of heparosan synthase 2 from Pasteurella multocida at 2.85 A
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Pedersen, L.C, Liu, J, Stancanelli, E, krahn, J.M.
Deposit date:2023-12-31
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
2RB6
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BU of 2rb6 by Molmil
X-Ray structure of the protein Q8EI81. Northeast Structural Genomics Consortium target SoR78A
Descriptor: Uncharacterized protein
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Vorobiev, S.M, Wang, H, Mao, L, Cunningham, K, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-18
Release date:2007-10-23
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-Ray structure of the protein Q8EI81.
To be Published
2RJB
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BU of 2rjb by Molmil
Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276
Descriptor: Uncharacterized protein, ZINC ION
Authors:Seetharaman, J, Chen, Y, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xia, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338.
To be Published
2RD1
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BU of 2rd1 by Molmil
X-Ray structure of the protein Q7CQI7. Northeast Structural Genomics Consortium target StR87A
Descriptor: Putative outer membrane lipoprotein
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Vorobiev, S.M, Wang, D, Fang, Y, Owens, L, Mao, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-20
Release date:2007-10-09
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray structure of the protein Q7CQI7.
To be Published
8HAY
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BU of 8hay by Molmil
d4-bound btDPP4
Descriptor: (1~{R})-1-[[4-[5-[[(1~{R})-6,7-dimethoxy-2-methyl-3,4-dihydro-1~{H}-isoquinolin-1-yl]methyl]-2-methoxy-phenoxy]phenyl]methyl]-6,7-dimethoxy-2-methyl-3,4-dihydro-1~{H}-isoquinoline, btDPP4
Authors:Hang, J, Jiang, C, Wang, K, Zhang, Z, Guo, F, Liu, J, Wang, G, Lei, X, Gonzalez, F, Qiao, J.
Deposit date:2022-10-27
Release date:2023-07-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Microbial-host-isozyme analyses reveal microbial DPP4 as a potential antidiabetic target.
Science, 381, 2023
5H4D
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BU of 5h4d by Molmil
Crystal structure of hSIRT3 in complex with a specific agonist Amiodarone hydrochloride
Descriptor: (2-butyl-1-benzofuran-3-yl){4-[2-(diethylamino)ethoxy]-3,5-diiodophenyl}methanone, 7-AMINO-4-METHYL-CHROMEN-2-ONE, ARG-HIS-LYS, ...
Authors:Zhang, S, Fu, L, Liu, J, Liu, B.
Deposit date:2016-10-31
Release date:2017-11-08
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Crystal structure of hSIRT3 in complex with a specific agonist Amiodarone hydrochloride
To Be Published
8VH7
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BU of 8vh7 by Molmil
Crystal structure of heparosan synthase 2 from Pasteurella multocida at 1.98 A
Descriptor: 1,2-ETHANEDIOL, Heparosan synthase B, MANGANESE (II) ION, ...
Authors:Pedersen, L.C, Liu, J, Stancanelli, E, Krahn, J.M.
Deposit date:2023-12-31
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
8VIW
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BU of 8viw by Molmil
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
Descriptor: Heparosan synthase B, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Krahn, J.M, Pedersen, L.C, Liu, J, Stancanelli, E, Borgnia, M, Vivarette, E.
Deposit date:2024-01-05
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
7LH9
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BU of 7lh9 by Molmil
Crystal structure of BRPF2 PWWP domain in complex with DNA
Descriptor: Bromodomain-containing protein 1, DNA
Authors:Zhang, M, Lei, M, Qin, S, Dong, A, Yang, A, Li, Y, Loppnau, P, Hughes, T.R, Arrowsmith, C.H, Edwards, A.M, Min, J, Liu, J, Structural Genomics Consortium (SGC)
Deposit date:2021-01-21
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the BRPF2 PWWP domain in complex with DNA reveals a different binding mode than the HDGF family of PWWP domains.
Biochim Biophys Acta Gene Regul Mech, 1864, 2021
6CHH
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Structure of human NNMT in complex with bisubstrate inhibitor MS2756
Descriptor: (2~{S})-5-[2-(3-aminocarbonylphenyl)ethyl-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]amino]-2-azanyl-pentanoic acid, 1,2-ETHANEDIOL, Nicotinamide N-methyltransferase
Authors:Babault, N, Liu, J, Jin, J.
Deposit date:2018-02-22
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of Bisubstrate Inhibitors of Nicotinamide N-Methyltransferase (NNMT).
J. Med. Chem., 61, 2018

225946

數據於2024-10-09公開中

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