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PDB: 704 results

3TDB
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BU of 3tdb by Molmil
Human Pin1 bound to trans peptidomimetic inhibitor
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, N-[(1E,2R)-1-[(2R)-2-{[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]carbamoyl}cyclopentylidene]-3-(phosphonooxy)propan-2-yl]-L-phenylalaninamide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Zhang, M, Zhang, Y.
Deposit date:2011-08-10
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.267 Å)
Cite:Structural and Kinetic Analysis of Prolyl-isomerization/Phosphorylation Cross-Talk in the CTD Code.
Acs Chem.Biol., 7, 2012
3TCZ
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BU of 3tcz by Molmil
Human Pin1 bound to cis peptidomimetic inhibitor
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, N~2~-({(1R,2Z)-2-[(2R)-2-(formylamino)-3-(phosphonooxy)propylidene]cyclopentyl}carbonyl)-L-argininamide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Zhang, M, Zhang, Y.
Deposit date:2011-08-09
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Kinetic Analysis of Prolyl-isomerization/Phosphorylation Cross-Talk in the CTD Code.
Acs Chem.Biol., 7, 2012
2HQX
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BU of 2hqx by Molmil
Crystal structure of human P100 tudor domain conserved region
Descriptor: P100 CO-ACTIVATOR TUDOR DOMAIN
Authors:Zhao, M, Liu, Z.J, Xu, H, Yang, J, Silvennoinen, O, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-07-19
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal Structure of Human P100 Tudor Domain Conserved Region
To be Published
2B1N
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BU of 2b1n by Molmil
Crystal structure of a papain-fold protein without the catalytic cysteine from seeds of Pachyrhizus erosus
Descriptor: SPE31, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose, peptide (LYS)(ALA)(SER)(VAL)(GLY)
Authors:Zhang, M, Wei, Z, Chang, S.
Deposit date:2005-09-16
Release date:2006-10-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a papain-fold protein without the catalytic residue: a novel member in the cysteine proteinase family
J.Mol.Biol., 358, 2006
5EYI
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BU of 5eyi by Molmil
Structure of PRRSV apo-NSP11 at 2.16A
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CHLORIDE ION, Non-structural protein 11, ...
Authors:Zhang, M.F, Chen, Z.
Deposit date:2015-11-25
Release date:2016-10-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Biology of the Arterivirus nsp11 Endoribonucleases.
J. Virol., 91, 2017
2P9M
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BU of 2p9m by Molmil
Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661
Descriptor: Hypothetical protein MJ0922
Authors:Zhao, M, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell II, J.T, Chen, L, Fu, Z.-Q, Charz, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-26
Release date:2007-07-03
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661
To be Published
7CSR
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BU of 7csr by Molmil
Structure of Ephexin4 R676L
Descriptor: Rho guanine nucleotide exchange factor 16
Authors:Zhang, M, Lin, L, Wang, C, Zhu, J.
Deposit date:2020-08-17
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Double inhibition and activation mechanisms of Ephexin family RhoGEFs.
Proc.Natl.Acad.Sci.USA, 118, 2021
8OOK
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BU of 8ook by Molmil
CryoEM Structure INO80core Hexasome complex Arp5 grappler refinement state1
Descriptor: Actin-related protein 5
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-05
Release date:2023-07-26
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (5.69 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
8OOF
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BU of 8oof by Molmil
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling complex subunit IES6, ...
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-05
Release date:2023-07-26
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
8OO9
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BU of 8oo9 by Molmil
CryoEM Structure INO80core Hexasome complex ATPase-DNA refinement state1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chromatin-remodeling ATPase INO80, DNA strand 1, ...
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-04
Release date:2023-07-26
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
8OOT
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BU of 8oot by Molmil
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling complex subunit IES6, ...
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-05
Release date:2023-07-26
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
5HC1
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BU of 5hc1 by Molmil
Structure of EAV NSP11 H141A mutant at 3.10A
Descriptor: Non-structural protein 11
Authors:Zhang, M.F, Chen, Z.Z.
Deposit date:2016-01-04
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Biology of the Arterivirus nsp11 Endoribonucleases.
J. Virol., 91, 2017
5HBZ
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BU of 5hbz by Molmil
Structure of EAV NSP11 K170A mutant at 3.10A
Descriptor: Non-structural protein 11
Authors:Zhang, M.F, Chen, Z.Z.
Deposit date:2016-01-04
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Biology of the Arterivirus nsp11 Endoribonucleases.
J. Virol., 91, 2017
1DG9
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BU of 1dg9 by Molmil
CRYSTAL STRUCTURE OF BOVINE LOW MOLECULAR WEIGHT PTPASE COMPLEXED WITH HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TYROSINE PHOSPHATASE
Authors:Zhang, M, Zhou, M, Van Etten, R.L, Stauffacher, C.V.
Deposit date:1999-11-23
Release date:1999-12-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of bovine low molecular weight phosphotyrosyl phosphatase complexed with the transition state analog vanadate.
Biochemistry, 36, 1997
1DMO
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BU of 1dmo by Molmil
CALMODULIN, NMR, 30 STRUCTURES
Descriptor: CALMODULIN
Authors:Zhang, M, Tanaka, T, Ikura, M.
Deposit date:1996-04-24
Release date:1996-08-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Calcium-induced conformational transition revealed by the solution structure of apo calmodulin.
Nat.Struct.Biol., 2, 1995
3T4G
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BU of 3t4g by Molmil
AIIGLMV segment from Alzheimer's Amyloid-Beta displayed on 54-membered macrocycle scaffold
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cyclic pseudo-peptide (ORN)AIIGLMV(ORN)KF(HAO)(4BF)K
Authors:Zhao, M, Liu, C, Cheng, P.N, Eisenberg, D, Nowick, J.S.
Deposit date:2011-07-26
Release date:2012-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Amyloid beta-sheet mimics that antagonize protein aggregation and reduce amyloid toxicity.
Nat Chem, 4, 2012
2JKI
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BU of 2jki by Molmil
Complex of Hsp90 N-terminal and Sgt1 CS domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CYTOSOLIC HEAT SHOCK PROTEIN 90, SGT1-LIKE PROTEIN
Authors:Zhang, M, Pearl, L.H.
Deposit date:2008-08-28
Release date:2008-10-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and Functional Coupling of Hsp90- and Sgt1-Centred Multi-Protein Complexes.
Embo J., 27, 2008
7WNH
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BU of 7wnh by Molmil
Crystal structure of Nurr1 binding to NBRE
Descriptor: DNA (5'-D(*CP*CP*GP*AP*AP*AP*AP*GP*GP*TP*CP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*TP*GP*AP*CP*CP*TP*TP*TP*TP*CP*GP*G)-3'), Nuclear receptor subfamily 4 group A member 2, ...
Authors:Zhao, M, Xu, T, Wang, N, Guo, Y, Liu, J.
Deposit date:2022-01-18
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Integrative analysis reveals structural basis for transcription activation of Nurr1 and Nurr1-RXR alpha heterodimer.
Proc.Natl.Acad.Sci.USA, 119, 2022
5YUG
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BU of 5yug by Molmil
AtVAL1 PHD-Like domain in the P31 space group
Descriptor: B3 domain-containing transcription repressor VAL1, GLYCEROL, ZINC ION
Authors:Zhang, M.M, Wu, B.X.
Deposit date:2017-11-22
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:AtVAL1 PHD-Like domain in the P31 space group
To Be Published
7CSO
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BU of 7cso by Molmil
Structure of Ephexin4 DH-PH-SH3
Descriptor: Rho guanine nucleotide exchange factor 16, SULFATE ION
Authors:Zhang, M, Lin, L, Wang, C, Zhu, J.
Deposit date:2020-08-15
Release date:2021-02-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Double inhibition and activation mechanisms of Ephexin family RhoGEFs.
Proc.Natl.Acad.Sci.USA, 118, 2021
7YJ0
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BU of 7yj0 by Molmil
Structural basis of oxepinone formation by a flavin-monooxygenase VibO
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, VibO
Authors:Zhang, M.F, Pan, L.F.
Deposit date:2022-07-18
Release date:2023-05-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A flavin-monooxygenase catalyzing oxepinone formation and the complete biosynthesis of vibralactone.
Nat Commun, 14, 2023
7YKI
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BU of 7yki by Molmil
Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR3 peptide
Descriptor: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ...
Authors:Zhang, M, Lin, L, Zhu, J.
Deposit date:2022-07-22
Release date:2023-08-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
6A6J
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BU of 6a6j by Molmil
Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA
Descriptor: RNA (5'-R(P*CP*AP*UP*(5MC)P*U)-3'), ZINC ION, Zebra fish Y-box protein1 (YB-1)
Authors:Zhang, M.M, Wu, B.X, Huang, Y, Ma, J.B.
Deposit date:2018-06-28
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay.
Mol.Cell, 75, 2019
5TO2
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BU of 5to2 by Molmil
Crystal structure of streptavidin with one wild type subunit and three mutated subunits (N23A/S27D/S45A)
Descriptor: DI(HYDROXYETHYL)ETHER, Streptavidin
Authors:Zhang, M, Biswas, S, Deng, W, Yu, H.
Deposit date:2016-10-16
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of streptavidin with one wild type subunit and three mutated subunits (N23A/S27D/S45A)
To Be Published
8IO5
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BU of 8io5 by Molmil
Herg1a-herg1b closed state 2
Descriptor: Potassium voltage-gated channel subfamily H member 2
Authors:Zhang, M.F.
Deposit date:2023-03-10
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of Herg1a-herg1b open state
To Be Published

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PDB entries from 2024-07-17

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