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PDB: 232 results

7F51
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Crystal structure of Hst2 in complex with 2'-O-Benzoyl ADP Ribose
Descriptor: NAD-dependent protein deacetylase HST2, ZINC ION, [(2R,3R,4R,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-2,4-bis(oxidanyl)oxolan-3-yl] benzoate
Authors:Wang, D, Yan, F, Chen, Y.
Deposit date:2021-06-21
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Global profiling of regulatory elements in the histone benzoylation pathway.
Nat Commun, 13, 2022
7F5M
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BU of 7f5m by Molmil
Crystal structure of Sas5 YEATS domain in complex with H3K27bz peptide
Descriptor: GLYCEROL, LYS-GLN-LEU-ALA-SER-LYS-ALA-ALA-ARG-LBZ-SER-ALA-PRO-SER-THR-GLY-GLY-VAL-LYS-TYR, Something about silencing protein 5
Authors:Wang, D, Yan, F, Chen, Y.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Global profiling of regulatory elements in the histone benzoylation pathway.
Nat Commun, 13, 2022
1VSM
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BU of 1vsm by Molmil
ASV INTEGRASE CORE DOMAIN IN CITRATE BUFFER PH 5.0
Descriptor: PROTEIN (INTEGRASE)
Authors:Lubkowski, J, Yang, F, Alexandratos, J, Wlodawer, A.
Deposit date:1998-09-18
Release date:1998-09-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for inactivating mutations and pH-dependent activity of avian sarcoma virus integrase.
J.Biol.Chem., 273, 1998
1VSK
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BU of 1vsk by Molmil
ASV INTEGRASE CORE DOMAIN D64N MUTATION IN CITRATE BUFFER PH 6.0
Descriptor: INTEGRASE
Authors:Lubkowski, J, Yang, F, Alexandratos, J, Wlodawer, A.
Deposit date:1998-09-18
Release date:1998-12-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for inactivating mutations and pH-dependent activity of avian sarcoma virus integrase.
J.Biol.Chem., 273, 1998
6LAE
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BU of 6lae by Molmil
Crystal structure of the DNA-binding domain of human XPA in complex with DNA
Descriptor: DNA (5'-D(P*GP*CP*AP*TP*CP*TP*CP*GP*CP*CP*T)-3'), DNA (5'-D(P*TP*GP*GP*CP*GP*AP*GP*AP*TP*GP*C)-3'), DNA repair protein complementing XP-A cells, ...
Authors:Lian, F.M, Yang, X, Jiang, Y.L, Yang, F, Li, C, Yang, W, Qian, C.
Deposit date:2019-11-12
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:New structural insights into the recognition of undamaged splayed-arm DNA with a single pair of non-complementary nucleotides by human nucleotide excision repair protein XPA.
Int.J.Biol.Macromol., 148, 2020
8ZCJ
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BU of 8zcj by Molmil
Cryo-EM structure of the pasireotide-bound SSTR5-Gi complex
Descriptor: 004-DTR-LYS-TYR-PHA-HYP, Beta-2 adrenergic receptor,Somatostatin receptor type 5,lgbit (fusion protein), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Li, Y.G, Meng, X.Y, Yang, X.R, Ling, S.L, Shi, P, Tian, C.L, Yang, F.
Deposit date:2024-04-29
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural insights into somatostatin receptor 5 bound with cyclic peptides.
Acta Pharmacol.Sin., 2024
8ZBE
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BU of 8zbe by Molmil
cryo-EM structure of the octreotide-bound SSTR5-Gi complex
Descriptor: Beta-2 adrenergic receptor,Somatostatin receptor type 5,lgbit (fusion protein), Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Li, Y.G, Meng, X.Y, Yang, X.R, Ling, S.L, Shi, P, Tian, C.L, Yang, F.
Deposit date:2024-04-26
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structural insights into somatostatin receptor 5 bound with cyclic peptides.
Acta Pharmacol.Sin., 2024
8J7N
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BU of 8j7n by Molmil
The cryo-EM structure of Fe3+ induced alpha-syn fibril.
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
Deposit date:2023-04-27
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The cryo-EM structure of PBB3 bound TMEM106B fibril.
To Be Published
8J7P
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BU of 8j7p by Molmil
The cryo-EM structure of PiB bound TMEM106B fibril.
Descriptor: Transmembrane protein 106B
Authors:Zhao, Q.Y, Tao, Y.Q, Yan, F, Liu, C, Li, D.
Deposit date:2023-04-27
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The cryo-EM structure of PiB bound TMEM106B fibril.
To Be Published
6L2W
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BU of 6l2w by Molmil
Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1
Descriptor: freshwater cyanophage protein
Authors:Wang, Y, Jin, H, Yang, F, Jiang, Y.L, Zhao, Y.Y, Chen, Z.P, Li, W.F, Chen, Y, Zhou, C.Z, Li, Q.
Deposit date:2019-10-07
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1.
Proteins, 88, 2020
8JGK
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BU of 8jgk by Molmil
Cryo-EM structure of mClC-3 with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)/Cl(-) exchange transporter 3
Authors:Wan, Y.Z.Q, Yang, F.
Deposit date:2023-05-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Structural basis of adenine nucleotides regulation and neurodegenerative pathology in ClC-3 exchanger.
Nat Commun, 15, 2024
8JGS
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BU of 8jgs by Molmil
Cryo-EM structure of apo state mClC-3_I607T
Descriptor: H(+)/Cl(-) exchange transporter 3
Authors:Wan, Y.Z.Q, Yang, F.
Deposit date:2023-05-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Structural basis of adenine nucleotides regulation and neurodegenerative pathology in ClC-3 exchanger.
Nat Commun, 15, 2024
8JGJ
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BU of 8jgj by Molmil
Cryo-EM structure of mClC-3 with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, H(+)/Cl(-) exchange transporter 3
Authors:Wan, Y.Z.Q, Yang, F.
Deposit date:2023-05-20
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of adenine nucleotides regulation and neurodegenerative pathology in ClC-3 exchanger.
Nat Commun, 15, 2024
8JGV
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BU of 8jgv by Molmil
Cryo-EM structure of mClC-3_I607T with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, H(+)/Cl(-) exchange transporter 3
Authors:Wan, Y.Z.Q, Yang, F.
Deposit date:2023-05-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural basis of adenine nucleotides regulation and neurodegenerative pathology in ClC-3 exchanger.
Nat Commun, 15, 2024
8JEV
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BU of 8jev by Molmil
Cryo-EM structure of apo state mClC-3
Descriptor: CHLORIDE ION, H(+)/Cl(-) exchange transporter 3
Authors:Wan, Y.Z.Q, Yang, F.
Deposit date:2023-05-16
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural basis of adenine nucleotides regulation and neurodegenerative pathology in ClC-3 exchanger.
Nat Commun, 15, 2024
9EUP
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BU of 9eup by Molmil
Inhibitor-free outward-open structure of Drosophila dopamine transporter
Descriptor: 9D5 ANTIBODY, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Pedersen, C.N, Yang, F, Ita, S, Xu, Y, Akunuri, R, Trampari, S, Neumann, C.M.T, Desdorf, L.M, Schioett, B, Salvino, J.M, Mortensen, O.V, Nissen, P, Shahsavar, A.
Deposit date:2024-03-27
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site.
J.Neurochem., 2024
9EUO
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BU of 9euo by Molmil
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Descriptor: 9D5 ANTIBODY, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Pedersen, C.N, Yang, F, Ita, S, Xu, Y, Akunuri, R, Trampari, S, Neumann, C.M.T, Desdorf, L.M, Schioett, B, Salvino, J.M, Mortensen, O.V, Nissen, P, Shahsavar, A.
Deposit date:2024-03-27
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site.
J.Neurochem., 2024
8HMY
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BU of 8hmy by Molmil
Cryo-EM structure of the human pre-catalytic TSEN/pre-tRNA complex
Descriptor: Chromosome 1 open reading frame 19, isoform CRA_a, MAGNESIUM ION, ...
Authors:Zhang, X, Yang, F, Zhan, X, Shi, Y.
Deposit date:2022-12-06
Release date:2023-04-19
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural basis of pre-tRNA intron removal by human tRNA splicing endonuclease.
Mol.Cell, 83, 2023
8HMZ
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BU of 8hmz by Molmil
Cryo-EM structure of the human post-catalytic TSEN/pre-tRNA complex
Descriptor: Chromosome 1 open reading frame 19, isoform CRA_a, MAGNESIUM ION, ...
Authors:Zhang, X, Yang, F, Zhan, X, Shi, Y.
Deposit date:2022-12-06
Release date:2023-04-19
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of pre-tRNA intron removal by human tRNA splicing endonuclease.
Mol.Cell, 83, 2023
3HGG
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BU of 3hgg by Molmil
Crystal Structure of CmeR Bound to Cholic Acid
Descriptor: CHOLIC ACID, CmeR
Authors:Routh, M.D, Yang, F.
Deposit date:2009-05-13
Release date:2010-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural basis for anionic ligand recognition by multidrug binding proteins: Crystal structures of CmeR-bile acid complexes
To be Published
7D77
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BU of 7d77 by Molmil
Cryo-EM structure of the cortisol-bound adhesion receptor GPR97-Go complex
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
Authors:Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
Deposit date:2020-10-03
Release date:2021-02-03
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
7D76
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BU of 7d76 by Molmil
Cryo-EM structure of the beclomethasone-bound adhesion receptor GPR97-Go complex
Descriptor: (8~{S},9~{R},10~{S},11~{S},13~{S},14~{S},16~{S},17~{R})-9-chloranyl-10,13,16-trimethyl-11,17-bis(oxidanyl)-17-(2-oxidanylethanoyl)-6,7,8,11,12,14,15,16-octahydrocyclopenta[a]phenanthren-3-one, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
Authors:Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
Deposit date:2020-10-03
Release date:2021-02-03
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
3H94
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BU of 3h94 by Molmil
Crystal structure of the membrane fusion protein CusB from Escherichia coli
Descriptor: Cation efflux system protein cusB, SILVER ION
Authors:Su, C.-C, Yang, F, Long, F, Reyon, D, Routh, M.D, Kuo, D.W, Mokhtari, A.K, Van Ornam, J.D, Rabe, K.L, Hoy, J.A, Lee, Y.J, Rajashankar, K.R, Yu, E.W.
Deposit date:2009-04-30
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.84 Å)
Cite:Crystal structure of the membrane fusion protein CusB from Escherichia coli
J.Mol.Biol., 393, 2009
1A5W
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BU of 1a5w by Molmil
ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3
Descriptor: 4-ACETYLAMINO-5-HYDROXYNAPHTHALENE-2,7-DISULFONIC ACID, INTEGRASE
Authors:Lubkowski, J, Yang, F, Alexandratos, J, Wlodawer, A.
Deposit date:1998-02-18
Release date:1998-05-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the catalytic domain of avian sarcoma virus integrase with a bound HIV-1 integrase-targeted inhibitor.
Proc.Natl.Acad.Sci.USA, 95, 1998
1A5V
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BU of 1a5v by Molmil
ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3 AND MN CATION
Descriptor: 4-ACETYLAMINO-5-HYDROXYNAPHTHALENE-2,7-DISULFONIC ACID, INTEGRASE, MANGANESE (II) ION
Authors:Lubkowski, J, Yang, F, Alexandratos, J, Wlodawer, A.
Deposit date:1998-02-18
Release date:1998-05-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the catalytic domain of avian sarcoma virus integrase with a bound HIV-1 integrase-targeted inhibitor.
Proc.Natl.Acad.Sci.USA, 95, 1998

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