Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 results

4BI3
DownloadVisualize
BU of 4bi3 by Molmil
Structure and function of amidase toxin - antitoxin combinations associated with the type VI secretion system of Serratia marcescens.
Descriptor: POTASSIUM ION, SSP1, SULFATE ION
Authors:Srikannathasan, V, English, G, Bui, N.K, Trunk, K, Rourke, P.E.F.O, Rao, V.A, Vollmer, W, Coulthurst, S.J, Hunter, W.N.
Deposit date:2013-04-09
Release date:2013-06-19
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Type Vi Secreted Peptidoglycan Dl-Endopeptidase Function, Specificity and Neutralization in Serratia Marcescens
Acta Crystallogr.,Sect.D, 69, 2013
4BJA
DownloadVisualize
BU of 4bja by Molmil
Globin-like protein Glb-12 from C.elegans
Descriptor: ACETATE ION, PROTEIN GLB-12, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:De Henau, S, Tilleman, L, Germani, F, Pauwels, M, Vlaeminck, C, Vanfleteren, J.R, Bert, W, Pesce, A, Nardini, M, Bolognesi, M, De Wael, K, Moens, L, Dewilde, S, Braeckman, B.P.
Deposit date:2013-04-17
Release date:2014-05-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Redox Signalling Globin is Essential for Reproduction in Caenorhabditis Elegans.
Nat.Commun., 6, 2015
8WST
DownloadVisualize
BU of 8wst by Molmil
Cryo-EM structure of Melanin-Concentrating Hormone Receptor 2 with MCH
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(q) subunit alpha-1, ...
Authors:Zhao, L, He, Q, Yuan, Q, Gu, Y, Shan, H, Hu, W, Wu, K, Xu, H.E, Zhang, Y, Wu, C.
Deposit date:2023-10-17
Release date:2024-06-19
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Mechanisms of ligand recognition and activation of melanin-concentrating hormone receptors.
Cell Discov, 10, 2024
3ROE
DownloadVisualize
BU of 3roe by Molmil
Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Thymidine
Descriptor: Apolipoprotein A-I-binding protein, THYMIDINE
Authors:Shumilin, I.A, Jha, K.N, Cymborowski, M, Herr, J.C, Minor, W.
Deposit date:2011-04-25
Release date:2012-07-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
8VRN
DownloadVisualize
BU of 8vrn by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus PPTQ
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-methylphenyl)-2-phenylquinazolin-4(3H)-one, ...
Authors:Chojnacka, W, Teng, J, Kim, J.J, Jensen, A.A, Hibbs, R.E.
Deposit date:2024-01-22
Release date:2024-06-26
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structural insights into GABA A receptor potentiation by Quaalude.
Nat Commun, 15, 2024
3RQX
DownloadVisualize
BU of 3rqx by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P4-Di(adenosine-5') tetraphosphate
Descriptor: ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATASE, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, CHLORIDE ION, ...
Authors:Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-28
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
8V6S
DownloadVisualize
BU of 8v6s by Molmil
Crystal structure of PcThsA in complex with Imidazole Adenine Dinucleotide
Descriptor: Thoeris protein ThsA Macro domain-containing protein, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-imidazol-1-yl-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, E, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
Deposit date:2023-12-02
Release date:2024-06-12
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
3RRB
DownloadVisualize
BU of 3rrb by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Bifunctional NAD(P)H-hydrate repair enzyme Nnr, POTASSIUM ION, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-04-29
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
4IIU
DownloadVisualize
BU of 4iiu by Molmil
Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Escherichia coli strain CFT073 complexed with NADP+ at 2.1 A resolution
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Hou, J, Osinski, T, Zheng, H, Shumilin, I, Shabalin, I, Shatsman, S, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-12-20
Release date:2013-01-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Escherichia coli strain CFT073 complexed with NADP+ at 2.1 A resolution
To be Published
8V6Q
DownloadVisualize
BU of 8v6q by Molmil
Crystal structure of EcThsA in ligand-free state
Descriptor: Thoeris protein ThsA Macro domain-containing protein
Authors:Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, V, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
Deposit date:2023-12-02
Release date:2024-06-12
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
4LG7
DownloadVisualize
BU of 4lg7 by Molmil
Crystal structure MBD4 MBD domain in complex with methylated CpG DNA
Descriptor: DNA (5'-D(*GP*CP*CP*AP*AP*(5CM)P*GP*TP*TP*GP*GP*C)-3'), Methyl-CpG-binding domain protein 4, UNKNOWN ATOM OR ION
Authors:Xu, C, Tempel, W, Wernimont, A.K, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-06-27
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure MBD4 MBD domain in complex with methylated CpG DNA
To be Published
4B5T
DownloadVisualize
BU of 4b5t by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with ketobutyrate
Descriptor: 2-KETOBUTYRIC ACID, 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5V
DownloadVisualize
BU of 4b5v by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with 4-hydroxyl-2-ketoheptane-1,7-dioate
Descriptor: (4R)-4-oxidanyl-2-oxidanylidene-heptanedioic acid, 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, GLYCEROL, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.041 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5U
DownloadVisualize
BU of 4b5u by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with pyruvate and succinic semialdehyde
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, 4-oxobutanoic acid, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.913 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4B5W
DownloadVisualize
BU of 4b5w by Molmil
Crystal structures of divalent metal dependent pyruvate aldolase R70A mutant, HpaI, in complex with pyruvate
Descriptor: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, CALCIUM ION, COBALT (II) ION, ...
Authors:Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
Deposit date:2012-08-07
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
8V6T
DownloadVisualize
BU of 8v6t by Molmil
Crystal structure of EcThsB2
Descriptor: BROMIDE ION, Molecular chaperone Tir
Authors:Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, E, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
Deposit date:2023-12-02
Release date:2024-06-12
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
4L2I
DownloadVisualize
BU of 4l2i by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-06-04
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
4ASI
DownloadVisualize
BU of 4asi by Molmil
Crystal structure of human ACACA C-terminal domain
Descriptor: ACETYL-COA CARBOXYLASE 1
Authors:Froese, D.S, Muniz, J.R.C, Kiyani, W, Krojer, T, Vollmar, M, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Oppermann, U, Yue, W.W.
Deposit date:2012-05-01
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Human Acaca C-Terminal Domain
To be Published
3S7E
DownloadVisualize
BU of 3s7e by Molmil
Crystal structure of Ara h 1
Descriptor: Allergen Ara h 1, clone P41B, CHLORIDE ION
Authors:Chruszcz, M, Maleki, S.J, Solberg, R, Minor, W.
Deposit date:2011-05-26
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural and Immunologic Characterization of Ara h 1, a Major Peanut Allergen.
J.Biol.Chem., 286, 2011
4L4L
DownloadVisualize
BU of 4l4l by Molmil
Structural Analysis of a Phosphoribosylated Inhibitor in Complex with Human Nicotinamide Phosphoribosyltransferase
Descriptor: 1,2-ETHANEDIOL, 6-({4-[(3,5-difluorophenyl)sulfonyl]benzyl}carbamoyl)-1-(5-O-phosphono-beta-D-ribofuranosyl)imidazo[1,2-a]pyridin-1-ium, Nicotinamide phosphoribosyltransferase, ...
Authors:Oh, A, Ho, Y, Zak, M, Liu, Y, Yuen, P, Zheng, X, Dragovich, S.P, Wang, W.
Deposit date:2013-06-08
Release date:2014-06-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.122 Å)
Cite:Structural and biochemical analyses of the catalysis and potency impact of inhibitor phosphoribosylation by human nicotinamide phosphoribosyltransferase.
Chembiochem, 15, 2014
3S8G
DownloadVisualize
BU of 3s8g by Molmil
1.8 A structure of ba3 cytochrome c oxidase mutant (A120F) from Thermus thermophilus in lipid environment
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Tiefenbrunn, T, Liu, W, Chen, Y, Katritch, V, Stout, C.D, Fee, J.A, Cherezov, V.
Deposit date:2011-05-27
Release date:2011-08-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High resolution structure of the ba3 cytochrome c oxidase from Thermus thermophilus in a lipidic environment.
Plos One, 6, 2011
4ECR
DownloadVisualize
BU of 4ecr by Molmil
Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 40 sec
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Nakamura, T, Zhao, Y, Yang, W.
Deposit date:2012-03-26
Release date:2012-07-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Watching DNA polymerase eta make a phosphodiester bond
Nature, 487, 2012
4HBN
DownloadVisualize
BU of 4hbn by Molmil
Crystal structure of the human HCN4 channel C-terminus carrying the S672R mutation
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, PHOSPHATE ION, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Xu, X, Marni, F, Wu, X, Su, Z, Musayev, F, Shrestha, S, Xie, C, Gao, W, Liu, Q, Zhou, L.
Deposit date:2012-09-28
Release date:2013-01-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Local and Global Interpretations of a Disease-Causing Mutation near the Ligand Entry Path in Hyperpolarization-Activated cAMP-Gated Channel.
Structure, 20, 2012
4ECY
DownloadVisualize
BU of 4ecy by Molmil
Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.0 (Na+ MES) with 1 Ca2+ ion
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Nakamura, T, Zhao, Y, Yang, W.
Deposit date:2012-03-26
Release date:2012-07-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.943 Å)
Cite:Watching DNA polymerase eta make a phosphodiester bond
Nature, 487, 2012
4HBK
DownloadVisualize
BU of 4hbk by Molmil
Structure of the Aldose Reductase from Schistosoma japonicum
Descriptor: Aldo-keto reductase family 1, member B4 (Aldose reductase)
Authors:Liu, J, Cheng, J, Zhang, X, Yang, Z, Hu, W, Xu, Y.
Deposit date:2012-09-28
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aldose reductase from Schistosoma japonicum: crystallization and structure-based inhibitor screening for discovering antischistosomal lead compounds.
Parasit Vectors, 6, 2013

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon