Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12929 件

3ZW0
DownloadVisualize
BU of 3zw0 by Molmil
Structure of BambL lectin from Burkholderia ambifaria
分子名称: BAMBL LECTIN, alpha-L-fucopyranose
著者Audfray, A, Claudinon, J, Abounit, S, Ruvoen-Clouet, N, Larson, G, Wimmerova, M, LePendu, J, Romer, W, Varrot, A, Imberty, A.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes.
J.Biol.Chem., 287, 2012
3ZS3
DownloadVisualize
BU of 3zs3 by Molmil
High resolution structure of Mal d 2, the thaumatin like food allergen from apple
分子名称: ACETATE ION, ACETIC ACID, FORMIC ACID, ...
著者Kopec, J, Smole, U, Pavkov, T, Breiteneder, H, Keller, W.
登録日2011-06-22
公開日2012-07-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High Resolution Structure of Mal D 2, the Thaumatin Like Food Allergen from Apple
To be Published
1ONP
DownloadVisualize
BU of 1onp by Molmil
IspC complex with Mn2+ and fosmidomycin
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, MANGANESE (II) ION
著者Steinbacher, S, Kaiser, J, Eisenreich, W, Huber, R, Bacher, A, Rohdich, F.
登録日2003-02-28
公開日2003-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of fosmidomycin action revealed by the complex with 2-C-methyl-D-erythritol 4-phosphate synthase (IspC). Implications for the catalytic mechanism and anti-malaria drug development.
J.BIOL.CHEM., 278, 2003
5W8W
DownloadVisualize
BU of 5w8w by Molmil
Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7 - new refinement
分子名称: Metallo-beta-lactamase type 2, SULFATE ION, UNKNOWN ATOM OR ION, ...
著者Gonzalez, J.M, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Wlodawer, A, Gonzalez, M.M, Vila, A.J.
登録日2017-06-22
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
3REE
DownloadVisualize
BU of 3ree by Molmil
Crystal structure of mitoNEET
分子名称: CDGSH iron-sulfur domain-containing protein 1, FE2/S2 (INORGANIC) CLUSTER
著者Funk, M.O, Arif, W, Xu, S, Mueser, T.C.
登録日2011-04-04
公開日2011-04-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Complexes of the Outer Mitochondrial Membrane Protein MitoNEET with Resveratrol-3-Sulfate.
Biochemistry, 50, 2011
3ZVH
DownloadVisualize
BU of 3zvh by Molmil
Methylaspartate ammonia lyase from Clostridium tetanomorphum mutant Q73A
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Raj, H, Szymanski, W, de Villiers, J, Rozeboom, H.J, Veetil, V.P, Reis, C.R, de Villiers, M, de Wildeman, S, Dekker, F.J, Quax, W.J, Thunnissen, A.M.W.H, Feringa, B.L, Janssen, D.B, Poelarends, G.J.
登録日2011-07-25
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Engineering Methylaspartate Ammonia Lyase for the Asymmetric Synthesis of Unnatural Amino Acids.
Nat.Chem., 4, 2012
5WDA
DownloadVisualize
BU of 5wda by Molmil
Structure of the PulG pseudopilus
分子名称: CALCIUM ION, General secretion pathway protein G
著者Lopez-Castilla, A, Thomassin, J.L, Bardiaux, B, Zheng, W, Nivaskumar, M, Yu, X, Nilges, M, Egelman, E.H, Izadi-Pruneyre, N, Francetic, O.
登録日2017-07-04
公開日2017-10-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structure of the calcium-dependent type 2 secretion pseudopilus.
Nat Microbiol, 2, 2017
5YYC
DownloadVisualize
BU of 5yyc by Molmil
Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4)
分子名称: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE
著者Dong, H, Hu, T.T, He, G.Z, Lu, D.R, Qi, J.X, Dou, Y.S, Long, W, He, X, Su, D, Ju, J.S.
登録日2017-12-08
公開日2019-01-02
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural features and kinetic characterization of alanine racemase from Bacillus pseudofirmus OF4.
Biochem. Biophys. Res. Commun., 497, 2018
4MTL
DownloadVisualize
BU of 4mtl by Molmil
Human Methyltransferase-Like Protein 21C
分子名称: Protein-lysine methyltransferase METTL21C, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION
著者Hong, B.S, Tempel, W, Dong, A, Li, Y, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2013-09-19
公開日2013-10-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Human Methyltransferase-Like Protein 21C
To be Published
4N7D
DownloadVisualize
BU of 4n7d by Molmil
Selenomethionine incorporated Bla g 4
分子名称: Bla g 4 allergen variant 1, CITRIC ACID, GLYCEROL
著者Offermann, L.R, Chan, S.L, Osinski, T, Tan, Y.W, Chew, F.T, Sivaraman, J, Mok, Y.K, Minor, W, Chruszcz, M.
登録日2013-10-15
公開日2014-05-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The major cockroach allergen Bla g 4 binds tyramine and octopamine.
Mol.Immunol., 60, 2014
4N7V
DownloadVisualize
BU of 4n7v by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep152 N-terminal fragment
分子名称: Centrosomal protein of 152 kDa, Serine/threonine-protein kinase PLK4
著者Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
登録日2013-10-16
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.758 Å)
主引用文献Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
5WSC
DownloadVisualize
BU of 5wsc by Molmil
Crystal of pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, soaked with allosteric activators AMP and Glucose 6-Phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
著者Zhong, W, Cai, Q, El Sahili, A, Lescar, J, Dedon, P.C.
登録日2016-12-06
公開日2017-11-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric pyruvate kinase-based "logic gate" synergistically senses energy and sugar levels in Mycobacterium tuberculosis.
Nat Commun, 8, 2017
4N9D
DownloadVisualize
BU of 4n9d by Molmil
Fragment-based Design of 3-Aminopyridine-derived Amides as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
分子名称: 1,2-ETHANEDIOL, 4-({[(4-tert-butylphenyl)sulfonyl]amino}methyl)-N-(pyridin-3-yl)benzamide, Nicotinamide phosphoribosyltransferase, ...
著者Dragovich, P.S, Zhao, G, Baumeister, T, Bravo, B, Giannetti, A.M, Ho, Y, Hua, R, Li, G, Liang, X, O'Brien, T, Skelton, N.J, Wang, C, Zhao, Q, Oh, A, Wang, W, Wang, Y, Xiao, Y, Yuen, P, Zak, M, Zheng, X.
登録日2013-10-20
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Fragment-based design of 3-aminopyridine-derived amides as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 24, 2014
3RPX
DownloadVisualize
BU of 3rpx by Molmil
Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
分子名称: Complement component 1 Q subcomponent-binding protein, UNKNOWN ATOM OR ION
著者Tempel, W, Tong, Y, Crombet, L, Shen, Y, Guan, X, Nedyalkova, L, Walker, J.R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
登録日2011-04-27
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
to be published
4NA5
DownloadVisualize
BU of 4na5 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748N
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
1OLO
DownloadVisualize
BU of 1olo by Molmil
Hexameric Replicative DNA Helicase RepA from Plasmid RSF1010 - Cubic Crystal Structure
分子名称: REGULATORY PROTEIN REPA, SULFATE ION
著者Niedenzu, T, Saenger, W.
登録日2003-08-08
公開日2003-09-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Hexameric Rsf1010 Helicase Repa: The Structural and Functional Importance of Single Amino Acid Residues
Nucleic Acids Res., 31, 2003
5ZOD
DownloadVisualize
BU of 5zod by Molmil
Crystal Structure of hFen1 in apo form
分子名称: Flap endonuclease 1, MAGNESIUM ION, POTASSIUM ION
著者Han, W, Hua, Y, Zhao, Y.
登録日2018-04-13
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
3R77
DownloadVisualize
BU of 3r77 by Molmil
Crystal structure of the D38A mutant of isochorismatase PhzD from Pseudomonas fluorescens 2-79 in complex with 2-amino-2-desoxyisochorismate ADIC
分子名称: (5S,6S)-6-amino-5-[(1-carboxyethenyl)oxy]cyclohexa-1,3-diene-1-carboxylic acid, CHLORIDE ION, Probable isochorismatase
著者Li, Q.A, Mavrodi, D.V, Thomashow, L.S, Roessle, M, Blankenfeldt, W.
登録日2011-03-22
公開日2011-03-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ligand Binding Induces an Ammonia Channel in 2-Amino-2-desoxyisochorismate (ADIC) Synthase PhzE.
J.Biol.Chem., 286, 2011
4MYU
DownloadVisualize
BU of 4myu by Molmil
Crystal structure of elongation factor G mutant(EFG)
分子名称: Elongation factor G, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Liu, G, Dong, J, Gong, W, Qin, Y.
登録日2013-09-28
公開日2014-08-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Crystal structure of elongation factor G mutant(EFG)
To be published
4MRX
DownloadVisualize
BU of 4mrx by Molmil
Crystal Structure of Y138F obelin mutant from Obelia longissima at 1.72 Angstrom resolution
分子名称: C2-HYDROPEROXY-COELENTERAZINE, Obelin
著者Natashin, P.V, Ding, W, Eremeeva, E.V, Markova, S.V, Lee, J, Vysotski, E.S, Liu, Z.J.
登録日2013-09-17
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.718 Å)
主引用文献Structures of the Ca2+-regulated photoprotein obelin Y138F mutant before and after bioluminescence support the catalytic function of a water molecule in the reaction.
Acta Crystallogr.,Sect.D, 70, 2014
5V56
DownloadVisualize
BU of 5v56 by Molmil
2.9A XFEL structure of the multi-domain human smoothened receptor (with E194M mutation) in complex with TC114
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN MONONUCLEOTIDE, N-methyl-N-[1-[4-(2-methylpyrazol-3-yl)phthalazin-1-yl]piperidin-4-yl]-4-nitro-2-(trifluoromethyl)benzamide, ...
著者Zhang, X, Zhao, F, Wu, Y, Yang, J, Han, G.W, Zhao, S, Ishchenko, A, Ye, L, Lin, X, Ding, K, Dharmarajan, V, Griffin, P.R, Gati, C, Nelson, G, Hunter, M.S, Hanson, M.A, Cherezov, V, Stevens, R.C, Tan, W, Tao, H, Xu, F.
登録日2017-03-13
公開日2017-05-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a multi-domain human smoothened receptor in complex with a super stabilizing ligand.
Nat Commun, 8, 2017
3R1D
DownloadVisualize
BU of 3r1d by Molmil
Crystal structure of GC(8BrG)GCGGCGGC duplex
分子名称: BROMIDE ION, RNA (5'-R(*GP*CP*(GRB)P*GP*CP*GP*GP*CP*GP*GP*C)-3'), SULFATE ION
著者Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
登録日2011-03-10
公開日2011-06-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome.
Nucleic Acids Res., 39, 2011
1ONR
DownloadVisualize
BU of 1onr by Molmil
STRUCTURE OF TRANSALDOLASE B
分子名称: TRANSALDOLASE B
著者Jia, J, Huang, W, Lindqvist, Y, Schneider, G.
登録日1996-08-13
公開日1997-03-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of transaldolase B from Escherichia coli suggests a circular permutation of the alpha/beta barrel within the class I aldolase family.
Structure, 4, 1996
4D0Q
DownloadVisualize
BU of 4d0q by Molmil
Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase
分子名称: 1,2-ETHANEDIOL, HYALURONATE LYASE
著者Suits, M.D.L, Pluvinage, B, Law, A, Liu, Y, Palma, A.S, Chai, W, Feizi, T, Boraston, A.B.
登録日2014-04-29
公開日2014-08-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Conformational Analysis of the Streptococcus Pneumoniae Hyaluronate Lyase and Characterization of its Hyaluronan-Specific Carbohydrate-Binding Module.
J.Biol.Chem., 289, 2014
5ZW5
DownloadVisualize
BU of 5zw5 by Molmil
Structure of SeMet-spAimR
分子名称: AimR transcriptional regulator
著者Cheng, W, Dou, C.
登録日2018-05-14
公開日2018-08-29
最終更新日2019-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities.
Nat Microbiol, 3, 2018

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon